Guide to the Human Genome
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Name: CSF2RA Sequence: fasta or formatted (434aa) NCBI GI: 238908517
Description:

colony stimulating factor 2 receptor alpha chain isoform f precursor

Referenced in:

Interleukins and Their Receptors
Macrophages and Monocytes
Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [400aa] colony stimulating factor 2 receptor alpha chain isoform a precursor
alt prot [400aa] colony stimulating factor 2 receptor alpha chain isoform a precursor
alt prot [410aa] colony stimulating factor 2 receptor alpha chain isoform g precursor
alt prot [267aa] colony stimulating factor 2 receptor alpha chain isoform h
alt prot [400aa] colony stimulating factor 2 receptor alpha chain isoform a precursor
alt prot [377aa] colony stimulating factor 2 receptor alpha chain isoform b precursor
alt prot [333aa] colony stimulating factor 2 receptor alpha chain isoform c precursor
alt prot [233aa] colony stimulating factor 2 receptor alpha chain isoform e precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0         13           2
 C cysteine            3.2         14           1
 D aspartate           4.4         19           2
 E glutamate           6.2         27           2
 F phenylalanine       5.3         23           2
 G glycine             5.3         23           1
 H histidine           2.5         11           1
 I isoleucine          4.8         21           2
 K lysine              4.4         19           2
 L leucine            11.1         48           3
 M methionine          0.7          3           1
 N asparagine          6.5         28           2
 P proline             5.3         23           2
 Q glutamine           4.1         18           2
 R arginine            7.6         33           3
 S serine              7.8         34           2
 T threonine           6.2         27           2
 V valine              6.7         29           2
 W tryptophan          1.6          7           1
 Y tyrosine            3.2         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   colony stimulating factor 2 receptor alpha chain is... 
CSF2RA                0.898   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.898   colony stimulating factor 2 receptor alpha chain is...
CSF2RA                0.898   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.840   colony stimulating factor 2 receptor alpha chain is...
CSF2RA                0.729   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.722   colony stimulating factor 2 receptor alpha chain iso...
CSF2RA                0.587   colony stimulating factor 2 receptor alpha chain is...
CSF2RA                0.483   colony stimulating factor 2 receptor alpha chain iso...
IL3RA                 0.159   interleukin 3 receptor, alpha precursor 
IL5RA                 0.066   interleukin 5 receptor, alpha isoform 1 precursor [H...
IL5RA                 0.066   interleukin 5 receptor, alpha isoform 1 precursor [H...
IL5RA                 0.065   interleukin 5 receptor, alpha isoform 2 precursor [H...
IL5RA                 0.065   interleukin 5 receptor, alpha isoform 3 precursor [H...
IL5RA                 0.065   interleukin 5 receptor, alpha isoform 3 precursor [H...
IL5RA                 0.065   interleukin 5 receptor, alpha isoform 2 precursor [H...
IL13RA1               0.045   interleukin 13 receptor, alpha 1 precursor 
C16orf89              0.033   hypothetical protein LOC146556 isoform 1 
MAP3K15               0.032   mitogen-activated protein kinase kinase kinase 15 [...
IL2RG                 0.030   interleukin 2 receptor, gamma precursor 
IL13RA2               0.029   interleukin 13 receptor, alpha 2 precursor 
PRLR                  0.027   prolactin receptor 
RPP30                 0.027   ribonuclease P/MRP 30kDa subunit isoform a 
PPIL3                 0.027   peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo...
LOC100128682          0.026   PREDICTED: hypothetical protein LOC100128682 
LOC100128682          0.026   PREDICTED: hypothetical protein LOC100128682 
LOC100128682          0.026   PREDICTED: hypothetical protein LOC100128682 
ZNF573                0.026   zinc finger protein 573 
BEND2                 0.025   BEN domain containing 2 
ZNF283                0.023   zinc finger protein 283 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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