Search of human proteins with 47419938

Search of human proteins with 47419938

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|47419938 transcription factor 7 (T-cell specific, HMG-box)
isoform 2 [Homo sapiens]
         (269 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|42518078 transcription factor 7 (T-cell specific, HMG-box) is...   562   e-161
gi|42518080 transcription factor 7 (T-cell specific, HMG-box) is...   562   e-161
gi|47419938 transcription factor 7 (T-cell specific, HMG-box) is...   562   e-161
gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6...   509   e-144
gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5...   509   e-144
gi|42518074 transcription factor 7 (T-cell specific, HMG-box) is...   509   e-144
gi|42714657 transcription factor 7 (T-cell specific, HMG-box) is...   509   e-144
gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo ...   269   2e-72
gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]   250   8e-67
gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens]   250   8e-67
gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo ...   246   1e-65
gi|226371623 transcription factor 7-like 2 isoform 4 [Homo sapiens]   243   1e-64
gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo sa...   234   8e-62
gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]   230   1e-60
gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]   230   1e-60
gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens]   230   1e-60
gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens]         210   9e-55
gi|112421108 capicua homolog [Homo sapiens]                            72   4e-13
gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Hom...    65   5e-11
gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Hom...    65   5e-11
gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo...    65   5e-11
gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo...    65   5e-11
gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo...    60   3e-09
gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom...    60   3e-09
gi|8924248 SRY-box 18 [Homo sapiens]                                   60   3e-09
gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo...    58   8e-09
gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo...    58   8e-09
gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo...    58   8e-09
gi|41406089 SRY-box 13 [Homo sapiens]                                  57   1e-08
gi|11967991 SRY-box 17 [Homo sapiens]                                  56   3e-08

>gi|42518078 transcription factor 7 (T-cell specific, HMG-box)
           isoform 2 [Homo sapiens]
          Length = 269

 Score =  562 bits (1449), Expect = e-161
 Identities = 269/269 (100%), Positives = 269/269 (100%)

Query: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
           MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
           ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120

Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240

Query: 241 STTGGKRNAFGTYPEKAAAPAPFLPMTVL 269
           STTGGKRNAFGTYPEKAAAPAPFLPMTVL
Sbjct: 241 STTGGKRNAFGTYPEKAAAPAPFLPMTVL 269


>gi|42518080 transcription factor 7 (T-cell specific, HMG-box)
           isoform 1 [Homo sapiens]
          Length = 384

 Score =  562 bits (1449), Expect = e-161
 Identities = 269/269 (100%), Positives = 269/269 (100%)

Query: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
           MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 116 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 175

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
           ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 176 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 235

Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 236 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 295

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 296 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 355

Query: 241 STTGGKRNAFGTYPEKAAAPAPFLPMTVL 269
           STTGGKRNAFGTYPEKAAAPAPFLPMTVL
Sbjct: 356 STTGGKRNAFGTYPEKAAAPAPFLPMTVL 384


>gi|47419938 transcription factor 7 (T-cell specific, HMG-box)
           isoform 2 [Homo sapiens]
          Length = 269

 Score =  562 bits (1449), Expect = e-161
 Identities = 269/269 (100%), Positives = 269/269 (100%)

Query: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
           MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
           ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120

Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240

Query: 241 STTGGKRNAFGTYPEKAAAPAPFLPMTVL 269
           STTGGKRNAFGTYPEKAAAPAPFLPMTVL
Sbjct: 241 STTGGKRNAFGTYPEKAAAPAPFLPMTVL 269


>gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6
           [Homo sapiens]
          Length = 250

 Score =  509 bits (1311), Expect = e-144
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
           MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
           ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120

Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240

Query: 241 STT 243
           STT
Sbjct: 241 STT 243


>gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5
           [Homo sapiens]
          Length = 366

 Score =  509 bits (1311), Expect = e-144
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
           MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
           ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120

Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240

Query: 241 STT 243
           STT
Sbjct: 241 STT 243


>gi|42518074 transcription factor 7 (T-cell specific, HMG-box)
           isoform 3 [Homo sapiens]
          Length = 269

 Score =  509 bits (1311), Expect = e-144
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
           MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
           ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120

Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240

Query: 241 STT 243
           STT
Sbjct: 241 STT 243


>gi|42714657 transcription factor 7 (T-cell specific, HMG-box)
           isoform 4 [Homo sapiens]
          Length = 268

 Score =  509 bits (1311), Expect = e-144
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
           MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
           ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120

Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240

Query: 241 STT 243
           STT
Sbjct: 241 STT 243


>gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo
           sapiens]
          Length = 386

 Score =  269 bits (687), Expect = 2e-72
 Identities = 146/241 (60%), Positives = 169/241 (70%), Gaps = 14/241 (5%)

Query: 37  QPPHGVPQLSLY-----EHFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           QP H V  L+       EHF+   HP+  P+D++ KQ + R    PD+  FY L+ G +G
Sbjct: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205

Query: 90  QLPHTVSWFTHPSLMLGSGVPG-HPAAIPHPAIVPPSGKQELQPFDRNL---KTQAESKA 145
           Q+   + WF+H  +    G PG H   IPHPAIV P  KQE    D +L   K Q E + 
Sbjct: 206 QITPPLGWFSHHMI---PGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRK 262

Query: 146 EKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYE 205
           E+E K+P IKKPLNAFMLYMKEMRA V+AECTLKESAAINQILGRRWHALSREEQAKYYE
Sbjct: 263 EQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYE 322

Query: 206 LARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLP 265
           LARKERQLHMQLYPGWSARDNYGKKK+R REK QES +GGKR++F T   KAA P P L 
Sbjct: 323 LARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESASGGKRSSFPTCKAKAATPGPLLE 382

Query: 266 M 266
           M
Sbjct: 383 M 383


>gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]
          Length = 442

 Score =  250 bits (639), Expect = 8e-67
 Identities = 145/271 (53%), Positives = 169/271 (62%), Gaps = 41/271 (15%)

Query: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228

Query: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288

Query: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348

Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408

Query: 236 EKHQESTTGGKRNAFGTYPEKAAAPAPFLPM 266
           +K    T G K++AF TY  KAAA A  L M
Sbjct: 409 DKQPGETNGEKKSAFATYKVKAAASAHPLQM 439


>gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens]
          Length = 489

 Score =  250 bits (639), Expect = 8e-67
 Identities = 145/271 (53%), Positives = 169/271 (62%), Gaps = 41/271 (15%)

Query: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 216 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 275

Query: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 276 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 335

Query: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 336 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 395

Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 396 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 455

Query: 236 EKHQESTTGGKRNAFGTYPEKAAAPAPFLPM 266
           +K    T G K++AF TY  KAAA A  L M
Sbjct: 456 DKQPGETNGEKKSAFATYKVKAAASAHPLQM 486


>gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo
           sapiens]
          Length = 371

 Score =  246 bits (629), Expect = 1e-65
 Identities = 134/219 (61%), Positives = 155/219 (70%), Gaps = 14/219 (6%)

Query: 37  QPPHGVPQLSLY-----EHFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           QP H V  L+       EHF+   HP+  P+D++ KQ + R    PD+  FY L+ G +G
Sbjct: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205

Query: 90  QLPHTVSWFTHPSLMLGSGVPG-HPAAIPHPAIVPPSGKQELQPFDRNL---KTQAESKA 145
           Q+   + WF+H  +    G PG H   IPHPAIV P  KQE    D +L   K Q E + 
Sbjct: 206 QITPPLGWFSHHMI---PGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRK 262

Query: 146 EKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYE 205
           E+E K+P IKKPLNAFMLYMKEMRA V+AECTLKESAAINQILGRRWHALSREEQAKYYE
Sbjct: 263 EQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYE 322

Query: 206 LARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTG 244
           LARKERQLHMQLYPGWSARDNYGKKK+R REK QES +G
Sbjct: 323 LARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESASG 361


>gi|226371623 transcription factor 7-like 2 isoform 4 [Homo sapiens]
          Length = 455

 Score =  243 bits (621), Expect = 1e-64
 Identities = 145/284 (51%), Positives = 167/284 (58%), Gaps = 54/284 (19%)

Query: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228

Query: 90  QLPHTVSWFTHPSLMLGSGVPGHP---------------------------AAIPHPAIV 122
           Q+PH + W   P   + +G   HP                             IPHPAIV
Sbjct: 229 QIPHPLGWQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIV 288

Query: 123 PPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLK 179
            P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AECTLK
Sbjct: 289 TPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLK 348

Query: 180 ESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQ 239
           ESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R+K  
Sbjct: 349 ESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQP 408

Query: 240 EST-----------------TGGKRNAFGTYPEKAAAPAPFLPM 266
             T                 TG K++AF TY  KAAA A  L M
Sbjct: 409 GETNEHSECFLNPCLSLPPITGEKKSAFATYKVKAAASAHPLQM 452


>gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo
           sapiens]
          Length = 399

 Score =  234 bits (596), Expect = 8e-62
 Identities = 133/244 (54%), Positives = 154/244 (63%), Gaps = 36/244 (14%)

Query: 37  QPPHGVPQLSLY-----EHFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           QP H V  L+       EHF+   HP+  P+D++ KQ + R    PD+  FY L+ G +G
Sbjct: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205

Query: 90  QLPHTVSWFTHPSLMLGSG----------------------VPG----HPAAIPHPAIVP 123
           Q+   + W   P   +  G                      +PG    H   IPHPAIV 
Sbjct: 206 QITPPLGWQGQPVYPITGGFRQPYPSSLSVDTSMSRFSHHMIPGPPGPHTTGIPHPAIVT 265

Query: 124 PSGKQELQPFDRNL---KTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           P  KQE    D +L   K Q E + E+E K+P IKKPLNAFMLYMKEMRA V+AECTLKE
Sbjct: 266 PQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKE 325

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R REK QE
Sbjct: 326 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQE 385

Query: 241 STTG 244
           S +G
Sbjct: 386 SASG 389


>gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]
          Length = 602

 Score =  230 bits (586), Expect = 1e-60
 Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 41/247 (16%)

Query: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 192 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 251

Query: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 252 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 311

Query: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 312 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 371

Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 372 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 431

Query: 236 EKHQEST 242
           +K    T
Sbjct: 432 DKQPGET 438


>gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]
          Length = 596

 Score =  230 bits (586), Expect = 1e-60
 Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 41/247 (16%)

Query: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228

Query: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288

Query: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348

Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408

Query: 236 EKHQEST 242
           +K    T
Sbjct: 409 DKQPGET 415


>gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens]
          Length = 579

 Score =  230 bits (586), Expect = 1e-60
 Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 41/247 (16%)

Query: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228

Query: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288

Query: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348

Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408

Query: 236 EKHQEST 242
           +K    T
Sbjct: 409 DKQPGET 415


>gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens]
          Length = 588

 Score =  210 bits (535), Expect = 9e-55
 Identities = 134/303 (44%), Positives = 168/303 (55%), Gaps = 56/303 (18%)

Query: 18  PPSGAGQHPQPQPPLHKANQPP--------HGVPQLSLY--EHFN--SPHPTPAPADISQ 65
           P S   +  +   P H +N+ P        H +  L  Y  +HF+  SP PT    +I  
Sbjct: 159 PSSATVKDTRSPSPAHLSNKVPVVQHPHHMHPLTPLITYSNDHFSPGSP-PTHLSPEIDP 217

Query: 66  KQ-VHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFT------------------HPSLMLG 106
           K  + RP    +LS +Y L+ G++GQ+PH + W                    +P+L + 
Sbjct: 218 KTGIPRPPHPSELSPYYPLSPGAVGQIPHPLGWLVPQQGQPMYSLPPGGFRHPYPALAMN 277

Query: 107 SGV--------------PGHP----AAIPHPAIVPPSGKQELQPFDRNLKTQAESKA--- 145
           + +              P HP    + IPHPAIV P  KQE  P   +     +S     
Sbjct: 278 ASMSSLVSSRFSPHMVAPAHPGLPTSGIPHPAIVSPIVKQEPAPPSLSPAVSVKSPVTVK 337

Query: 146 EKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYE 205
           ++E KKP +KKPLNAFMLYMKEMRAKV+AECTLKESAAINQILGR+WH LSREEQAKYYE
Sbjct: 338 KEEEKKPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYE 397

Query: 206 LARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGK--RNAFGTYPEKAAAP-AP 262
           LARKERQLH QLYP WSARDNYGKKK+R REK    T   +  + A G    K+  P   
Sbjct: 398 LARKERQLHSQLYPTWSARDNYGKKKKRKREKQLSQTQSQQQVQEAEGALASKSKKPCVQ 457

Query: 263 FLP 265
           +LP
Sbjct: 458 YLP 460


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 72.4 bits (176), Expect = 4e-13
 Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 38/268 (14%)

Query: 3   KETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQ--LSLYEHFNSPHPTPAP 60
           KE   SA   + H  PP G G     +PP     + P   P   L + E    P PT   
Sbjct: 72  KEPAESA--AVAHERPPGGTGSADPERPPGATCPESPGPGPPHPLGVVESGKGPPPT--- 126

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
              ++++   P   P L         S  +  H  ++ +  S              P   
Sbjct: 127 ---TEEEASGPPGEPRLD--------SETESDHDDAFLSIMS--------------PEIQ 161

Query: 121 IVPPSGKQELQ-----PFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
           +  P GK+  Q     P +R+  ++ + ++  + +K  I++P+NAFM++ K  RA V   
Sbjct: 162 LPLPPGKRRTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQR 221

Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
              +++  +++ILG  W+AL  +E+ KY++LA + ++ H + +P W   +   KK     
Sbjct: 222 HPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEA 281

Query: 236 EKHQESTTGG-KRNAFGTYPEKAAAPAP 262
           +       GG K     +  E   A AP
Sbjct: 282 KPTSLGLAGGHKETRERSMSETGTAAAP 309


>gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Homo
           sapiens]
          Length = 841

 Score = 65.5 bits (158), Expect = 5e-11
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 15/122 (12%)

Query: 139 TQAESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWH 193
           T AE++  ++A+     +P IK+P+NAFM++ K+ R K++       ++ I++ILG RW 
Sbjct: 614 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 673

Query: 194 ALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTY 253
           ++S +E+  YYE   +  ++H++ YP      NY  K R  R         GK+   G Y
Sbjct: 674 SMSNQEKQPYYEEQARLSKIHLEKYP------NYKYKPRPKR----TCIVDGKKLRIGEY 723

Query: 254 PE 255
            +
Sbjct: 724 KQ 725


>gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Homo
           sapiens]
          Length = 801

 Score = 65.5 bits (158), Expect = 5e-11
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 15/122 (12%)

Query: 139 TQAESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWH 193
           T AE++  ++A+     +P IK+P+NAFM++ K+ R K++       ++ I++ILG RW 
Sbjct: 574 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 633

Query: 194 ALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTY 253
           ++S +E+  YYE   +  ++H++ YP      NY  K R  R         GK+   G Y
Sbjct: 634 SMSNQEKQPYYEEQARLSKIHLEKYP------NYKYKPRPKR----TCIVDGKKLRIGEY 683

Query: 254 PE 255
            +
Sbjct: 684 KQ 685


>gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo
           sapiens]
          Length = 804

 Score = 65.5 bits (158), Expect = 5e-11
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 15/122 (12%)

Query: 139 TQAESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWH 193
           T AE++  ++A+     +P IK+P+NAFM++ K+ R K++       ++ I++ILG RW 
Sbjct: 577 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 636

Query: 194 ALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTY 253
           ++S +E+  YYE   +  ++H++ YP      NY  K R  R         GK+   G Y
Sbjct: 637 SMSNQEKQPYYEEQARLSKIHLEKYP------NYKYKPRPKR----TCIVDGKKLRIGEY 686

Query: 254 PE 255
            +
Sbjct: 687 KQ 688


>gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo
           sapiens]
          Length = 808

 Score = 65.5 bits (158), Expect = 5e-11
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 15/122 (12%)

Query: 139 TQAESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWH 193
           T AE++  ++A+     +P IK+P+NAFM++ K+ R K++       ++ I++ILG RW 
Sbjct: 581 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 640

Query: 194 ALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTY 253
           ++S +E+  YYE   +  ++H++ YP      NY  K R  R         GK+   G Y
Sbjct: 641 SMSNQEKQPYYEEQARLSKIHLEKYP------NYKYKPRPKR----TCIVDGKKLRIGEY 690

Query: 254 PE 255
            +
Sbjct: 691 KQ 692


>gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo
           sapiens]
          Length = 501

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 11/131 (8%)

Query: 109 VPGHPAAIPHPAIVPPSGKQELQ-------PFDRNLKTQAESKAEKEAKKPTIKKPLNAF 161
           VP  P      +++ PS K E +       P D  +     SK     +   +K+P+NAF
Sbjct: 289 VPLTPVPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKD----RNGHVKRPMNAF 344

Query: 162 MLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGW 221
           M++ +  R  +        +A I+  LG  W+ LS E++  YY+ A+K ++ H + +PGW
Sbjct: 345 MVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGW 404

Query: 222 SARDNYGKKKR 232
             +   GK+KR
Sbjct: 405 VYQPRPGKRKR 415


>gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo
           sapiens]
          Length = 753

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 11/131 (8%)

Query: 109 VPGHPAAIPHPAIVPPSGKQELQ-------PFDRNLKTQAESKAEKEAKKPTIKKPLNAF 161
           VP  P      +++ PS K E +       P D  +     SK     +   +K+P+NAF
Sbjct: 289 VPLTPVPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKD----RNGHVKRPMNAF 344

Query: 162 MLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGW 221
           M++ +  R  +        +A I+  LG  W+ LS E++  YY+ A+K ++ H + +PGW
Sbjct: 345 MVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGW 404

Query: 222 SARDNYGKKKR 232
             +   GK+KR
Sbjct: 405 VYQPRPGKRKR 415


>gi|8924248 SRY-box 18 [Homo sapiens]
          Length = 384

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 12/130 (9%)

Query: 110 PGHPAAIPHPAIVPPS----GKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYM 165
           P  PA+ P P   PP     G+  L P  R      E +A  E++   I++P+NAFM++ 
Sbjct: 45  PAAPASPPSPQRSPPRSPEPGRYGLSPAGRG-----ERQAADESR---IRRPMNAFMVWA 96

Query: 166 KEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARD 225
           K+ R ++  +     +A ++++LG+ W  L+  E+  + E A + R  H++ +P +  R 
Sbjct: 97  KDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEEAERLRVQHLRDHPNYKYRP 156

Query: 226 NYGKKKRRSR 235
              K+ R++R
Sbjct: 157 RRKKQARKAR 166


>gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo
           sapiens]
          Length = 377

 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 5/86 (5%)

Query: 141 AESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHAL 195
           +ES+  +E++     +P IK+P+NAFM++ K+ R K++       ++ I++ILG RW A+
Sbjct: 152 SESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAM 211

Query: 196 SREEQAKYYELARKERQLHMQLYPGW 221
           +  E+  YYE   +  + H++ YP +
Sbjct: 212 TNLEKQPYYEEQARLSKQHLEKYPDY 237


>gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo
           sapiens]
          Length = 750

 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 5/86 (5%)

Query: 141 AESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHAL 195
           +ES+  +E++     +P IK+P+NAFM++ K+ R K++       ++ I++ILG RW A+
Sbjct: 525 SESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAM 584

Query: 196 SREEQAKYYELARKERQLHMQLYPGW 221
           +  E+  YYE   +  + H++ YP +
Sbjct: 585 TNLEKQPYYEEQARLSKQHLEKYPDY 610


>gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo
           sapiens]
          Length = 763

 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 5/86 (5%)

Query: 141 AESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHAL 195
           +ES+  +E++     +P IK+P+NAFM++ K+ R K++       ++ I++ILG RW A+
Sbjct: 538 SESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAM 597

Query: 196 SREEQAKYYELARKERQLHMQLYPGW 221
           +  E+  YYE   +  + H++ YP +
Sbjct: 598 TNLEKQPYYEEQARLSKQHLEKYPDY 623


>gi|41406089 SRY-box 13 [Homo sapiens]
          Length = 622

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 10/100 (10%)

Query: 154 IKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQL 213
           IK+P+NAFM++ K+ R K++       +++I++ILG RW +++ +E+  YYE   +  + 
Sbjct: 424 IKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQ 483

Query: 214 HMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTY 253
           H++ YP      +Y  K R  R    E    GKR   G Y
Sbjct: 484 HLEKYP------DYKYKPRPKRTCIVE----GKRLRVGEY 513


>gi|11967991 SRY-box 17 [Homo sapiens]
          Length = 414

 Score = 56.2 bits (134), Expect = 3e-08
 Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 19/165 (11%)

Query: 101 PSLMLGSGVPGHPAAIPHPAIVPPSGKQELQ---PFDRNLKTQAESKAEKEAKKPTIKKP 157
           P++M G G        P    + P G  +++   P +      A  +A+ E++   I++P
Sbjct: 21  PAVMAGLG------PCPWAESLSPIGDMKVKGEAPANSGAPAGAAGRAKGESR---IRRP 71

Query: 158 LNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQL 217
           +NAFM++ K+ R ++  +     +A ++++LG+ W AL+  E+  + E A + R  HMQ 
Sbjct: 72  MNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQD 131

Query: 218 YPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAP 262
           +P +  R      +RR + K  +   GG  +  G    +AAA  P
Sbjct: 132 HPNYKYR-----PRRRKQVKRLKRVEGGFLH--GLAEPQAAALGP 169


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.131    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,410,195
Number of Sequences: 37866
Number of extensions: 800179
Number of successful extensions: 4601
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 323
Number of HSP's that attempted gapping in prelim test: 3715
Number of HSP's gapped (non-prelim): 1049
length of query: 269
length of database: 18,247,518
effective HSP length: 101
effective length of query: 168
effective length of database: 14,423,052
effective search space: 2423072736
effective search space used: 2423072736
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.