TCF7 30477

Name: TCF7	Sequence: fasta or formatted (269aa)		NCBI GI: 47419938
Description: transcription factor 7 (T-cell specific, HMG-box) isoform 2		Referenced in: SOX Family T cells
Other entries for this name: alt prot [366aa] transcription factor 7 (T-cell specific, HMG-box) 5 alt prot [250aa] transcription factor 7 (T-cell specific, HMG-box) 6 alt prot [269aa] transcription factor 7 (T-cell specific, HMG-box) isoform 3 alt mRNA [269aa] transcription factor 7 (T-cell specific, HMG-box) isoform 2 alt prot [384aa] transcription factor 7 (T-cell specific, HMG-box) isoform 1 alt prot [268aa] transcription factor 7 (T-cell specific, HMG-box) isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 25 3 C cysteine 0.4 1 1 D aspartate 1.5 4 1 E glutamate 5.9 16 2 F phenylalanine 3.0 8 1 G glycine 5.9 16 2 H histidine 5.2 14 1 I isoleucine 2.6 7 1 K lysine 8.2 22 3 L leucine 8.6 23 2 M methionine 3.3 9 1 N asparagine 3.0 8 1 P proline 11.9 32 3 Q glutamine 6.3 17 1 R arginine 4.8 13 2 S serine 7.1 19 1 T threonine 4.8 13 2 V valine 3.0 8 1 W tryptophan 1.1 3 1 Y tyrosine 4.1 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 1.000 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 1.000 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.901 transcription factor 7 (T-cell specific, HMG-box) 6... TCF7 0.901 transcription factor 7 (T-cell specific, HMG-box) 5... TCF7 0.901 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.901 transcription factor 7 (T-cell specific, HMG-box) is... LEF1 0.454 lymphoid enhancer-binding factor 1 isoform 3 TCF7L2 0.419 transcription factor 7-like 2 isoform 6 TCF7L2 0.419 transcription factor 7-like 2 isoform 3 LEF1 0.412 lymphoid enhancer-binding factor 1 isoform 2 TCF7L2 0.406 transcription factor 7-like 2 isoform 4 LEF1 0.389 lymphoid enhancer-binding factor 1 isoform 1 TCF7L2 0.382 transcription factor 7-like 2 isoform 1 TCF7L2 0.382 transcription factor 7-like 2 isoform 2 TCF7L2 0.382 transcription factor 7-like 2 isoform 5 TCF7L1 0.345 HMG-box transcription factor TCF-3 CIC 0.088 capicua homolog SOX6 0.074 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX6 0.074 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX6 0.074 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX6 0.074 SRY (sex determining region Y)-box 6 isoform 2 [Homo... SOX30 0.065 SRY (sex determining region Y)-box 30 isoform b [Homo... SOX30 0.065 SRY (sex determining region Y)-box 30 isoform a [Hom... SOX18 0.065 SRY-box 18 SOX5 0.061 SRY (sex determining region Y)-box 5 isoform c [Homo... SOX5 0.061 SRY (sex determining region Y)-box 5 isoform b [Homo... SOX5 0.061 SRY (sex determining region Y)-box 5 isoform a [Homo... SOX13 0.060 SRY-box 13 SOX17 0.058 SRY-box 17 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.