TCF7 11562

Name: TCF7	Sequence: fasta or formatted (250aa)		NCBI GI: 198442851
Description: transcription factor 7 (T-cell specific, HMG-box) 6		Referenced in: SOX Family T cells
Other entries for this name: alt prot [366aa] transcription factor 7 (T-cell specific, HMG-box) 5 alt prot [269aa] transcription factor 7 (T-cell specific, HMG-box) isoform 3 alt prot [269aa] transcription factor 7 (T-cell specific, HMG-box) isoform 2 alt prot [384aa] transcription factor 7 (T-cell specific, HMG-box) isoform 1 alt prot [268aa] transcription factor 7 (T-cell specific, HMG-box) isoform 4 alt prot [269aa] transcription factor 7 (T-cell specific, HMG-box) isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 20 2 C cysteine 0.4 1 1 D aspartate 2.0 5 1 E glutamate 6.0 15 2 F phenylalanine 2.4 6 1 G glycine 5.2 13 1 H histidine 6.0 15 1 I isoleucine 2.8 7 1 K lysine 8.0 20 3 L leucine 8.8 22 2 M methionine 3.2 8 1 N asparagine 3.2 8 1 P proline 11.2 28 3 Q glutamine 6.8 17 1 R arginine 4.8 12 2 S serine 8.4 21 1 T threonine 4.4 11 2 V valine 2.8 7 1 W tryptophan 1.2 3 1 Y tyrosine 4.4 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription factor 7 (T-cell specific, HMG-box) 6... TCF7 0.974 transcription factor 7 (T-cell specific, HMG-box) 5... TCF7 0.974 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.972 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.970 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.970 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.970 transcription factor 7 (T-cell specific, HMG-box) is... LEF1 0.439 lymphoid enhancer-binding factor 1 isoform 3 LEF1 0.439 lymphoid enhancer-binding factor 1 isoform 2 TCF7L2 0.419 transcription factor 7-like 2 isoform 4 TCF7L2 0.417 transcription factor 7-like 2 isoform 2 TCF7L2 0.417 transcription factor 7-like 2 isoform 5 TCF7L2 0.415 transcription factor 7-like 2 isoform 1 LEF1 0.413 lymphoid enhancer-binding factor 1 isoform 1 TCF7L2 0.411 transcription factor 7-like 2 isoform 6 TCF7L2 0.411 transcription factor 7-like 2 isoform 3 TCF7L1 0.369 HMG-box transcription factor TCF-3 CIC 0.092 capicua homolog SOX6 0.078 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX6 0.078 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX6 0.078 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX6 0.078 SRY (sex determining region Y)-box 6 isoform 2 [Homo... SOX30 0.070 SRY (sex determining region Y)-box 30 isoform b [Homo... SOX30 0.070 SRY (sex determining region Y)-box 30 isoform a [Hom... SOX18 0.070 SRY-box 18 SOX5 0.066 SRY (sex determining region Y)-box 5 isoform c [Homo... SOX5 0.066 SRY (sex determining region Y)-box 5 isoform b [Homo... SOX5 0.066 SRY (sex determining region Y)-box 5 isoform a [Homo... SOX13 0.064 SRY-box 13 SOX2 0.062 sex-determining region Y-box 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.