TTR 29627

Name: TTR	Sequence: fasta or formatted (147aa)		NCBI GI: 4507725
Description: transthyretin precursor		Referenced in: Thyroid and Thyroid Hormone Receptor Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 15 2 C cysteine 1.4 2 1 D aspartate 3.4 5 2 E glutamate 8.8 13 3 F phenylalanine 4.1 6 1 G glycine 7.5 11 1 H histidine 3.4 5 1 I isoleucine 3.4 5 1 K lysine 5.4 8 1 L leucine 8.8 13 4 M methionine 1.4 2 1 N asparagine 2.0 3 1 P proline 5.4 8 1 Q glutamine 0.0 0 0 R arginine 3.4 5 2 S serine 8.8 13 1 T threonine 8.2 12 2 V valine 9.5 14 2 W tryptophan 1.4 2 1 Y tyrosine 3.4 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transthyretin precursor LDB2 0.011 LIM domain binding 2 isoform b LDB2 0.011 LIM domain binding 2 isoform a FICD 0.011 Huntingtin interacting protein E KIAA1244 0.007 brefeldin A-inhibited guanine nucleotide-exchange p... COL14A1 0.007 collagen, type XIV, alpha 1 DEFB132 0.007 beta-defensin 32 precursor DNAH1 0.007 dynein, axonemal, heavy chain 1 FBXL2 0.007 F-box and leucine-rich repeat protein 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.