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Search of human proteins with 46276863
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46276863 parathymosin [Homo sapiens]
(102 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46276863 parathymosin [Homo sapiens] 198 7e-52
gi|151101404 prothymosin, alpha isoform 2 [Homo sapiens] 82 7e-17
gi|151101407 prothymosin, alpha isoform 1 [Homo sapiens] 82 9e-17
gi|113420848 PREDICTED: hypothetical protein [Homo sapiens] 82 1e-16
gi|169217548 PREDICTED: hypothetical protein [Homo sapiens] 80 3e-16
gi|239752637 PREDICTED: hypothetical protein [Homo sapiens] 80 3e-16
gi|113420837 PREDICTED: hypothetical protein [Homo sapiens] 80 3e-16
gi|17975763 myelin transcription factor 1 [Homo sapiens] 65 1e-11
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 64 2e-11
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 62 1e-10
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 60 3e-10
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 60 3e-10
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 60 5e-10
gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo ... 59 8e-10
gi|169210053 PREDICTED: hypothetical protein [Homo sapiens] 58 2e-09
gi|221219020 NYD-SP11 protein [Homo sapiens] 57 2e-09
gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens] 57 2e-09
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 57 3e-09
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 57 3e-09
gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens] 57 4e-09
gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens] 57 4e-09
gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens] 57 4e-09
gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens] 57 4e-09
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 57 4e-09
gi|28274705 family with sequence similarity 9, member A [Homo sa... 57 4e-09
gi|239050813 lipoxygenase homology domains 1 isoform 1 [Homo sap... 56 5e-09
gi|4504425 high-mobility group box 1 [Homo sapiens] 56 7e-09
gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens] 56 7e-09
gi|21735415 centromere protein B [Homo sapiens] 55 9e-09
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 55 9e-09
>gi|46276863 parathymosin [Homo sapiens]
Length = 102
Score = 198 bits (504), Expect = 7e-52
Identities = 102/102 (100%), Positives = 102/102 (100%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED 60
MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED
Sbjct: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED 60
Query: 61 EGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENGASA 102
EGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENGASA
Sbjct: 61 EGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENGASA 102
>gi|151101404 prothymosin, alpha isoform 2 [Homo sapiens]
Length = 110
Score = 82.4 bits (202), Expect = 7e-17
Identities = 47/107 (43%), Positives = 70/107 (65%), Gaps = 10/107 (9%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENG-------AEEEEEETA 53
MS+ +V+ ++E++ KDLKEKKE VEE + ++ EENG +EEEEE
Sbjct: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG 60
Query: 54 EDGEEEDEGE-EEDEEEEEEDDEGPALKRAAE--EEDEADPKRQKTE 97
E+ EEE+EG+ EE++ +E+E+ E KRAAE E+D+ D K+QKT+
Sbjct: 61 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTD 107
>gi|151101407 prothymosin, alpha isoform 1 [Homo sapiens]
Length = 111
Score = 82.0 bits (201), Expect = 9e-17
Identities = 46/108 (42%), Positives = 72/108 (66%), Gaps = 11/108 (10%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRK--------ERKKEVVEEEENGAEEEEEET 52
MS+ +V+ ++E++ KDLKEKKE VEE + + E ++ +E +N +EEEEE
Sbjct: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG 60
Query: 53 AEDGEEEDEGE-EEDEEEEEEDDEGPALKRAAE--EEDEADPKRQKTE 97
E+ EEE+EG+ EE++ +E+E+ E KRAAE E+D+ D K+QKT+
Sbjct: 61 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTD 108
>gi|113420848 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 81.6 bits (200), Expect = 1e-16
Identities = 46/106 (43%), Positives = 68/106 (64%), Gaps = 9/106 (8%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENG-------AEEEEEETA 53
MS+ +V+ ++E+ AKDLKEKKE V+E + ++ EENG +EE EE+
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG 60
Query: 54 EDGEEEDEGEEEDEEEEEEDDEGPALKRAAE--EEDEADPKRQKTE 97
E+ EEE EG+ E+E+ +EE+ E KRAAE E+D+ D K+QKT+
Sbjct: 61 EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTD 106
>gi|169217548 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 80.5 bits (197), Expect = 3e-16
Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 9/106 (8%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENG-------AEEEEEETA 53
MS+ +V+ ++E+ AKDLKEKKE V++ + ++ EENG +EE EE+
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKDAENGRDAPANGNANEENGEQEADNEVDEEGEESG 60
Query: 54 EDGEEEDEGEEEDEEEEEEDDEGPALKRAAE--EEDEADPKRQKTE 97
E+ EEE EG+ E+E+ +EE+ E KRAAE E+D+ D K+QKT+
Sbjct: 61 EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTD 106
>gi|239752637 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 80.5 bits (197), Expect = 3e-16
Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 9/106 (8%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENG-------AEEEEEETA 53
MS+ +V+ ++E+ AKDLKEKKE V++ + ++ EENG +EE EE+
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKDAENGRDAPANGNANEENGEQEADNEVDEEGEESG 60
Query: 54 EDGEEEDEGEEEDEEEEEEDDEGPALKRAAE--EEDEADPKRQKTE 97
E+ EEE EG+ E+E+ +EE+ E KRAAE E+D+ D K+QKT+
Sbjct: 61 EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTD 106
>gi|113420837 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 80.5 bits (197), Expect = 3e-16
Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 9/106 (8%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENG-------AEEEEEETA 53
MS+ +V+ ++E+ AKDLKEKKE V++ + ++ EENG +EE EE+
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKDAENGRDAPANGNANEENGEQEADNEVDEEGEESG 60
Query: 54 EDGEEEDEGEEEDEEEEEEDDEGPALKRAAE--EEDEADPKRQKTE 97
E+ EEE EG+ E+E+ +EE+ E KRAAE E+D+ D K+QKT+
Sbjct: 61 EEEEEEKEGDGEEEDGDEEEAESATGKRAAEDDEDDDVDTKKQKTD 106
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 64.7 bits (156), Expect = 1e-11
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDE 61
+E+ VE E S + E + S K++ EEE+ EEEEEE ED EEE+E
Sbjct: 221 AEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEE 280
Query: 62 GEEEDEEEEEEDDEGPALKRAAEEEDEADP 91
EEE+EEEEEE++E + EEE+EA P
Sbjct: 281 EEEEEEEEEEEEEEEEE-EEEEEEEEEAAP 309
Score = 61.6 bits (148), Expect = 1e-10
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 4 KSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGE 63
+S+E AA S + K+K E+ +E ++E EEE+ EEEEEE E+ EEE+E E
Sbjct: 238 QSLEDAA--SEESSKQKGILSHEEEDEEEEEEEEEEEED---EEEEEEEEEEEEEEEEEE 292
Query: 64 EEDEEEEEEDDEGPALKRAAEEEDEADPKRQK 95
EE+EEEEEE++E A +ED + QK
Sbjct: 293 EEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQK 324
Score = 55.8 bits (133), Expect = 7e-09
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKAS-RKERKKEVVEEEENGAEEEE---------- 49
+ E + AA+E K L + E EE ER +++ + A EE
Sbjct: 198 LQEAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSH 257
Query: 50 EETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENGA 100
EE E+ EEE+E EEEDEEEEEE++E + EEE+E + + ++ E A
Sbjct: 258 EEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAA 308
Score = 53.9 bits (128), Expect = 3e-08
Identities = 32/90 (35%), Positives = 49/90 (54%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDE 61
SE+S + LS ++ E++E+ EE+ E ++E EEEE EEEEEE E+ EEE+E
Sbjct: 245 SEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 304
Query: 62 GEEEDEEEEEEDDEGPALKRAAEEEDEADP 91
E + +ED + ++A E P
Sbjct: 305 EEAAPDVIFQEDTSHTSAQKAPELRGPESP 334
Score = 39.7 bits (91), Expect = 5e-04
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDG---E 57
+S + + E ++ +E +E+ EE+ +E ++E EEEE EEEEEE A +
Sbjct: 255 LSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQ 314
Query: 58 EEDEGEEEDEEEEEEDDEGPALK---------RAAEEEDEADPKRQKT 96
E+ + E E P+ K R+ +++DE R+ T
Sbjct: 315 EDTSHTSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDEDTHSRKST 362
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 64.3 bits (155), Expect = 2e-11
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVE---------EEENGAEEEEEETA 53
EK + E +D +E+++K E+ +KER +E+ E EEE G EEEEE
Sbjct: 693 EKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKE 752
Query: 54 EDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEE------DEADPKRQKTE 97
+G+EE EGEE + E E+E+ E +RA +EE D+ + + ++TE
Sbjct: 753 GEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETE 802
Score = 58.5 bits (140), Expect = 1e-09
Identities = 35/91 (38%), Positives = 47/91 (51%)
Query: 7 EAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEED 66
E E ++ + + E EE E + EEEE E EEEE E+GEEE EGEEE
Sbjct: 950 EEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEG 1009
Query: 67 EEEEEEDDEGPALKRAAEEEDEADPKRQKTE 97
E E EE++EG EE E + + ++ E
Sbjct: 1010 EGEGEEEEEGEVEGEVEGEEGEGEGEEEEGE 1040
Score = 55.1 bits (131), Expect = 1e-08
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 19/116 (16%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKER--KKEVVEEEENGAEEEEEETAEDGEEED 60
EK E E ++++ ++EK E + ++ER K+E EEE + E EEEET GEE++
Sbjct: 750 EKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKE 809
Query: 61 EG-----------------EEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
EG EEE+ E EEE+ EG + EEE+ ++ E G
Sbjct: 810 EGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEG 865
Score = 54.7 bits (130), Expect = 2e-08
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 18 KEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAE-DGEEEDEGEEEDEEEEEEDDEG 76
+E +E+ EE+ +E + EEEE G E E E E +GE E+E EE+ EE E++ EG
Sbjct: 993 EEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEG 1052
Query: 77 PALKRAAEEEDEADPKRQKT 96
+R EEE+E + K Q+T
Sbjct: 1053 EENRRNREEEEEEEGKYQET 1072
Score = 53.9 bits (128), Expect = 3e-08
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 7 EAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEE-------EETAEDGEEE 59
E E+ +++E K + EE+ E ++E E EE E EE EE E+GE E
Sbjct: 809 EEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGE 868
Query: 60 DEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
+EGEE + E EEE+ EG + E +E + + + E G
Sbjct: 869 EEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEG 908
Score = 52.4 bits (124), Expect = 8e-08
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 18 KEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEE------EEE 71
K ++E+ EE+ +E + E EEE G EEE E E+ EE EGEEE EE EEE
Sbjct: 823 KGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEE 882
Query: 72 EDDEGPALKRAAEEEDEADPKRQKTENG 99
+ EG EE+E + + ++ G
Sbjct: 883 GEGEGEEEGEGEGEEEEGEGEGEEEGEG 910
Score = 51.2 bits (121), Expect = 2e-07
Identities = 31/86 (36%), Positives = 43/86 (50%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E+ E E + + + E EE+ E + E E E G EEE EE E+ E+E EG
Sbjct: 993 EEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEG 1052
Query: 63 EEEDEEEEEEDDEGPALKRAAEEEDE 88
EE EEE++E + EEE+E
Sbjct: 1053 EENRRNREEEEEEEGKYQETGEEENE 1078
Score = 50.4 bits (119), Expect = 3e-07
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E+ E E ++ + + E+ E + ++ + E EEEE E EEEE +GEEE EG
Sbjct: 914 EEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEG-EEEEGEWEGEEEEGEGEGEEEGEG 972
Query: 63 EEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
E E+ E E E++EG E E+E + + + E G
Sbjct: 973 EGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEG 1009
Score = 50.1 bits (118), Expect = 4e-07
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E+ E E ++ + ++E E + +E + E EEE E EEEE +GEEE EG
Sbjct: 851 EEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEG 910
Query: 63 EEEDE------EEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
E E+E EEE E+ EG + E E E + E G
Sbjct: 911 EGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEG 953
Score = 48.9 bits (115), Expect = 9e-07
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 18 KEKKEKVEEKASRKERKKEVVEEEENGAEEEE------EETAEDGE---EEDEGEEEDEE 68
+E+ E EE+ +E + E EEE G EEE EE E+GE EE+EGE E EE
Sbjct: 830 EEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEE 889
Query: 69 EEEEDDEGPALKRAAEEEDEADPKRQKTE 97
E E + E + EEE E + + ++ E
Sbjct: 890 EGEGEGEEEEGEGEGEEEGEGEGEEEEGE 918
Score = 48.5 bits (114), Expect = 1e-06
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEE-----EEETAEDGE 57
E+ E E + +E + K EE+ E ++E E E G EEE EEE +GE
Sbjct: 837 EEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGE 896
Query: 58 EED---EGEEEDE-EEEEEDDEGPALKRAAEEEDEADPKRQKTE 97
EE+ EGEEE E E EEE+ EG + E E E + + + E
Sbjct: 897 EEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGE 940
Score = 47.0 bits (110), Expect = 3e-06
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 18 KEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGP 77
+E + + EE+ + ++E E E G EEE E EDGE E E EE + E EEE+ EG
Sbjct: 906 EEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGE 965
Query: 78 ALKRAAEEEDEADPKRQKTE 97
+ E +E + + ++ E
Sbjct: 966 GEEEGEGEGEEGEGEGEEEE 985
Score = 46.6 bits (109), Expect = 4e-06
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENG----AEEEEEETAEDGEE 58
E+ E E + +E + + EE + E + E E EE G E EEEE +GEE
Sbjct: 830 EEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEE 889
Query: 59 EDEGEEEDEE---EEEEDDEGPALKRAAEEEDEADPKRQKTE 97
E EGE E+EE E EE+ EG + E + E + + + E
Sbjct: 890 EGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGE 931
Score = 46.6 bits (109), Expect = 4e-06
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E+ E E + E++E E E + E E E G EE EE E EEE EG
Sbjct: 880 EEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEG 939
Query: 63 EEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
E ED E E E++EG EEE E + + + G
Sbjct: 940 EGEDGEGEGEEEEGE--WEGEEEEGEGEGEEEGEGEG 974
Score = 45.1 bits (105), Expect = 1e-05
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E+ E E ++ + + E+ E + +E + EEEE E EEE E EEE EG
Sbjct: 860 EEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEG 919
Query: 63 EEEDE------EEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
+ E+E E EEE+ EG E E+E + E G
Sbjct: 920 KGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEG 962
Score = 45.1 bits (105), Expect = 1e-05
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E E E ++ + K E+ E+ + ++E E E+G E EEE E EE+EG
Sbjct: 903 EGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEG 962
Query: 63 EEEDEEE------------EEEDDEGPALKRAAEEEDEADPKRQKTENG 99
E E EEE EEE+ EG + EEE E + + ++ G
Sbjct: 963 EGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEG 1011
Score = 45.1 bits (105), Expect = 1e-05
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENG-AEEEEEETAEDGE---E 58
E+ E E ++ + + E E + +E + E EEE G EEE E E+GE E
Sbjct: 923 EEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGE 982
Query: 59 EDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
E+EGE E EEEE E++ + E E+E + + ++ E G
Sbjct: 983 EEEGEGEGEEEEGEEEG----EEEGEGEEEGEGEGEEEEEG 1019
Score = 43.9 bits (102), Expect = 3e-05
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEE------EETA-- 53
+++ E E + +E+ ++ EE+ E K+E EE G E+E EE A
Sbjct: 724 NQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGK 783
Query: 54 -EDGEEE-DEGEEEDEEEE---EEDDEGPALKRAAEEEDEADPKRQKTE 97
E GEEE D+GE E+EE E EE +EG ++ EE + + + ++ E
Sbjct: 784 EEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEE 832
Score = 43.9 bits (102), Expect = 3e-05
Identities = 30/95 (31%), Positives = 45/95 (47%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E+ E E ++ + + E+ E +E + EEE G EEEE + EE +EG
Sbjct: 869 EEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEG 928
Query: 63 EEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTE 97
E E EEEE E + EEE E + + ++ E
Sbjct: 929 EGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGE 963
Score = 42.7 bits (99), Expect = 6e-05
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E+ E E+ ++ + + E+ E + +ER+KE EE EEEEE E+G+ ++ G
Sbjct: 1016 EEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEE--EEGKYQETG 1073
Query: 63 EEEDEEEEEED 73
EEE+E ++ E+
Sbjct: 1074 EEENERQDGEE 1084
Score = 42.4 bits (98), Expect = 8e-05
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 16 DLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDE 75
+++ E +E A ++E KK EE+E E+ + + E E+ GEEE E EEE+ +
Sbjct: 685 EMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGD 744
Query: 76 GPALKRAAEEEDEADPKRQ 94
R EEE E + K +
Sbjct: 745 -----REEEEEKEGEGKEE 758
Score = 41.6 bits (96), Expect = 1e-04
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVE-------EKASRKERKKEVVEEEENGAEEEEEETA 53
+ E+ VEA E + K +KEK E +KA E K + V E E+G E + T
Sbjct: 601 IEEQEVEANEE-NVKVHGGRKEKTEILSDDLTDKAEVSEGKAKSVGEAEDGPEGRGDGTC 659
Query: 54 EDGEEEDEGEEEDEEEEEEDDEGPA-LKRAAEEEDEADPKRQ 94
E+G E +++E E+ E D+G ++R E E E K +
Sbjct: 660 EEGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEE 701
Score = 40.8 bits (94), Expect = 2e-04
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 7 EAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEED 66
E E ++ + + E EE E ++ + EE G E E E E+GE E E E +
Sbjct: 888 EEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGE 947
Query: 67 EEEEEEDDEGPALKRAAEEEDEADPKRQKTE 97
EEEE + EG + E E+E + + ++ E
Sbjct: 948 GEEEEGEWEGEEEEGEGEGEEEGEGEGEEGE 978
Score = 39.7 bits (91), Expect = 5e-04
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 22 EKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKR 81
E+ E + +E ++E E E+ G EE E+ EEE+ +E EEE E +G K+
Sbjct: 1028 EEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDGEEYKK 1087
Query: 82 AAEEEDEADPKRQKT 96
++ + + KT
Sbjct: 1088 VSKIKGSVKYGKHKT 1102
Score = 35.4 bits (80), Expect = 0.010
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 11 ELSAKDLKEKKEKVEEKASR--------KERKKEVVEEEENGAEEEEEETAEDGEEED-- 60
E+ + DL +K E E KA + R EE +GAE ++E E GE++
Sbjct: 624 EILSDDLTDKAEVSEGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKGR 683
Query: 61 -------EGEEEDEEEEE-EDDEGPALKRAAEEEDEADPKRQKTENG 99
EGE+E E+EE + +G ++ E+ + Q+ E G
Sbjct: 684 GEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEG 730
Score = 34.3 bits (77), Expect = 0.022
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 19 EKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPA 78
E+ E EEK ++ K +EE+E A EE + +E+ E +D ++ E EG A
Sbjct: 582 EEVEIPEEKEGAEDSKGNGIEEQEVEANEENVKVHGGRKEKTEILSDDLTDKAEVSEGKA 641
Query: 79 LKRAAEEEDEADPKRQKT-ENGAS 101
K E ED + + T E G+S
Sbjct: 642 -KSVGEAEDGPEGRGDGTCEEGSS 664
Score = 33.9 bits (76), Expect = 0.028
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 25 EEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEE---------EDDE 75
+E+ + E+ K E E G E+E E+ ++ D GEE++++E E E +E
Sbjct: 671 DEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRD-GEEQEQKEREQGHQKERNQEMEE 729
Query: 76 GPALKRAAEEEDEADPKRQKTENG 99
G + EE+E D + ++ + G
Sbjct: 730 GGEEEHGEGEEEEGDREEEEEKEG 753
Score = 28.1 bits (61), Expect = 1.6
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 12 LSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEE 71
L+ D ++ E++ E K K+ V + G + T + ++E E +E+E
Sbjct: 538 LTENDDSDEYEEMSEMKEGKACKQHVSQ----GIFMTQPATTIEAFSDEEVEIPEEKEGA 593
Query: 72 EDDEGPALKRAAEEEDEADPKRQKTENG 99
ED +G ++ E+E EA+ + K G
Sbjct: 594 EDSKGNGIE---EQEVEANEENVKVHGG 618
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 62.0 bits (149), Expect = 1e-10
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
EK E + K+ +++KEK EE+ RK ++K+ EEEE EEEEE EEE+E
Sbjct: 35 EKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEER---EEEEE-----EEEEEK 86
Query: 63 EEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTE 97
EEE++EE + +R EEE++ +R+KT+
Sbjct: 87 EEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTK 121
Score = 49.7 bits (117), Expect = 5e-07
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Query: 15 KDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG-----EEEDEEE 69
++ +E +E+ E++ RKE++KE +E+E + +E E ++ EEE++ +++ EEE
Sbjct: 14 EETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEE 73
Query: 70 EEEDDEGPALKRAAEEEDEADPKRQK 95
E E++E + EEE E +R+K
Sbjct: 74 EREEEEEEEEEEKEEEEKEEGRRRKK 99
Score = 44.3 bits (103), Expect = 2e-05
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 30 RKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEA 89
+K++KKE E EE EE EEE ++G+ +++ +E+ +E+E++ KR +EE+E
Sbjct: 3 KKKKKKETEETEET--EETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEK 60
Query: 90 DPKRQK 95
KR++
Sbjct: 61 KRKRKR 66
Score = 42.4 bits (98), Expect = 8e-05
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDE 61
+EK E E + K KK+K EE ER++E EEEE EEE+EE +++
Sbjct: 49 TEKRKEKEEEEKKRKRKRKKKKEEE-----EREEEEEEEEEEKEEEEKEEGRRRKKKKKR 103
Query: 62 GEEEDEEEEEE 72
+E+EEE+++
Sbjct: 104 RRKEEEEEKKK 114
Score = 41.6 bits (96), Expect = 1e-04
Identities = 21/83 (25%), Positives = 46/83 (55%)
Query: 15 KDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDD 74
K KE +E E + + +E +KE +E+ + +E+E + +E ++ +E++EEE++
Sbjct: 5 KKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKR 64
Query: 75 EGPALKRAAEEEDEADPKRQKTE 97
+ K E E+E + + ++ E
Sbjct: 65 KRKKKKEEEEREEEEEEEEEEKE 87
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 60.5 bits (145), Expect = 3e-10
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 25 EEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAE 84
+E+ + E ++E VEE+ EE EE+ ED E +++GEEE+EEEEEE++E + E
Sbjct: 192 DEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEE----EEEEE 247
Query: 85 EEDEADPKRQKTE 97
EE E D + QK E
Sbjct: 248 EEYEQDERDQKEE 260
Score = 55.1 bits (131), Expect = 1e-08
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 6 VEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEE 65
V+ A S++ KE+ E + + +E+ N E EEE ED EE++E EE+
Sbjct: 159 VDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEED 218
Query: 66 DEEEEEEDDEGPALKRAAEEEDEADPKRQK 95
EE+EE D++G + EEE+E + + ++
Sbjct: 219 AEEDEEVDEDGEEEEEEEEEEEEEEEEEEE 248
Score = 54.7 bits (130), Expect = 2e-08
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Query: 22 EKVEEKASRKERKKEVVEEEENGAE--EEEEETAEDGEEEDEGEEEDEE-EEEEDDEGPA 78
E+ + +E +E VEE+E E EE+EE EDGEEE+E EEE+EE EEEE++E
Sbjct: 193 EQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQ 252
Query: 79 LKRAAEEE-DEADPKRQKTENGASA 102
+R +EE ++ D + + +++G+ +
Sbjct: 253 DERDQKEEGNDYDTRSEASDSGSES 277
Score = 53.1 bits (126), Expect = 5e-08
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEE----NGAEEEEEETAEDGEE 58
E +++ + + ++E VEE E +E EE+E +G EEEEEE E+ EE
Sbjct: 184 ETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEE 243
Query: 59 EDEGEEEDEEEEEEDDEGPALKRAAEEED 87
E+E EE +++E ++ +EG +E D
Sbjct: 244 EEEEEEYEQDERDQKEEGNDYDTRSEASD 272
Score = 52.4 bits (124), Expect = 8e-08
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEE--EEEETAEDGEEE 59
S S + E+++++ E +S ++ E EE G EE EE+E E+ EE
Sbjct: 164 SRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNN--TENEEEGVEEDVEEDEEVEEDAEE 221
Query: 60 DEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
DE +ED EEEEE++E + EEE+ +R + E G
Sbjct: 222 DEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEG 261
Score = 50.4 bits (119), Expect = 3e-07
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 19 EKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPA 78
E+ E+VEE A E E EEEE EEEEEE E+ EEE+E E+++ +++EE ++
Sbjct: 210 EEDEEVEEDAEEDEEVDEDGEEEE---EEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDT 266
Query: 79 LKRAAEEEDEA 89
A++ E+
Sbjct: 267 RSEASDSGSES 277
Score = 46.2 bits (108), Expect = 6e-06
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 13/82 (15%)
Query: 23 KVEEKASRKERK-KEVVEEEENGAEEE------EEETAEDGEEEDEGEEEDEEEEEEDDE 75
+V+ +ASR + KE V EE G++ E +E + E E+EG EED EE+EE +E
Sbjct: 158 EVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEE 217
Query: 76 GPALKRAAEEEDEADPKRQKTE 97
AEE++E D ++ E
Sbjct: 218 D------AEEDEEVDEDGEEEE 233
Score = 40.8 bits (94), Expect = 2e-04
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 3 EKSVEAAAELS--AKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED 60
E+ VE E+ A++ +E E EE+ +E ++E EEEE E++E + E+G + D
Sbjct: 206 EEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYD 265
Query: 61 EGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQK 95
E + E R+ D +D K+++
Sbjct: 266 TRSEASDSGSESVSFTDGSVRSGSGTDGSDEKKKE 300
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 60.5 bits (145), Expect = 3e-10
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 25 EEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAE 84
+E+ + E ++E VEE+ EE EE+ ED E +++GEEE+EEEEEE++E + E
Sbjct: 192 DEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEE----EEEEE 247
Query: 85 EEDEADPKRQKTE 97
EE E D + QK E
Sbjct: 248 EEYEQDERDQKEE 260
Score = 55.1 bits (131), Expect = 1e-08
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 6 VEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEE 65
V+ A S++ KE+ E + + +E+ N E EEE ED EE++E EE+
Sbjct: 159 VDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEED 218
Query: 66 DEEEEEEDDEGPALKRAAEEEDEADPKRQK 95
EE+EE D++G + EEE+E + + ++
Sbjct: 219 AEEDEEVDEDGEEEEEEEEEEEEEEEEEEE 248
Score = 54.7 bits (130), Expect = 2e-08
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Query: 22 EKVEEKASRKERKKEVVEEEENGAE--EEEEETAEDGEEEDEGEEEDEE-EEEEDDEGPA 78
E+ + +E +E VEE+E E EE+EE EDGEEE+E EEE+EE EEEE++E
Sbjct: 193 EQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQ 252
Query: 79 LKRAAEEE-DEADPKRQKTENGASA 102
+R +EE ++ D + + +++G+ +
Sbjct: 253 DERDQKEEGNDYDTRSEASDSGSES 277
Score = 53.1 bits (126), Expect = 5e-08
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEE----NGAEEEEEETAEDGEE 58
E +++ + + ++E VEE E +E EE+E +G EEEEEE E+ EE
Sbjct: 184 ETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEE 243
Query: 59 EDEGEEEDEEEEEEDDEGPALKRAAEEED 87
E+E EE +++E ++ +EG +E D
Sbjct: 244 EEEEEEYEQDERDQKEEGNDYDTRSEASD 272
Score = 52.4 bits (124), Expect = 8e-08
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEE--EEEETAEDGEEE 59
S S + E+++++ E +S ++ E EE G EE EE+E E+ EE
Sbjct: 164 SRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNN--TENEEEGVEEDVEEDEEVEEDAEE 221
Query: 60 DEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
DE +ED EEEEE++E + EEE+ +R + E G
Sbjct: 222 DEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEG 261
Score = 50.4 bits (119), Expect = 3e-07
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 19 EKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPA 78
E+ E+VEE A E E EEEE EEEEEE E+ EEE+E E+++ +++EE ++
Sbjct: 210 EEDEEVEEDAEEDEEVDEDGEEEE---EEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDT 266
Query: 79 LKRAAEEEDEA 89
A++ E+
Sbjct: 267 RSEASDSGSES 277
Score = 46.2 bits (108), Expect = 6e-06
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 13/82 (15%)
Query: 23 KVEEKASRKERK-KEVVEEEENGAEEE------EEETAEDGEEEDEGEEEDEEEEEEDDE 75
+V+ +ASR + KE V EE G++ E +E + E E+EG EED EE+EE +E
Sbjct: 158 EVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEE 217
Query: 76 GPALKRAAEEEDEADPKRQKTE 97
AEE++E D ++ E
Sbjct: 218 D------AEEDEEVDEDGEEEE 233
Score = 40.8 bits (94), Expect = 2e-04
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 3 EKSVEAAAELS--AKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED 60
E+ VE E+ A++ +E E EE+ +E ++E EEEE E++E + E+G + D
Sbjct: 206 EEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYD 265
Query: 61 EGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQK 95
E + E R+ D +D K+++
Sbjct: 266 TRSEASDSGSESVSFTDGSVRSGSGTDGSDEKKKE 300
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 59.7 bits (143), Expect = 5e-10
Identities = 32/88 (36%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 11 ELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEE 70
+L+ ++ E+ EE+ +E ++E EEEE+ EEEE+E E+ EE+E EEE+ EEE
Sbjct: 877 DLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDE--EEYFEEEEEEEEEFEEE 934
Query: 71 EEDDEGPALKRAAEEEDEADPKRQKTEN 98
E++EG + EE++E + + ++ E+
Sbjct: 935 FEEEEGELEEEEEEEDEEEEEELEEVED 962
Score = 56.2 bits (134), Expect = 5e-09
Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E+ E E ++ +E++E EE+ +E E EEEE EEE EE E+GE E+E
Sbjct: 889 EEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEE--EEGELEEEE 946
Query: 63 EEEDEEEEEEDDEGPALK--RAAEEEDEADP 91
EEEDEEEEEE +E L+ A E +E P
Sbjct: 947 EEEDEEEEEELEEVEDLEFGTAGGEVEEGAP 977
Score = 52.0 bits (123), Expect = 1e-07
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E+ E E ++ +E+++ EE+ +E +E EEEE EE EEE E EEE+E
Sbjct: 890 EEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEE 949
Query: 63 EEEDEEEEEEDDEGPALKRAAEEEDEADP 91
+EE+EEE EE ++ E E+ A P
Sbjct: 950 DEEEEEELEEVEDLEFGTAGGEVEEGAPP 978
Score = 51.2 bits (121), Expect = 2e-07
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDE 61
S E E ++ +E++E+ E+ +E ++E EEEE EE EEE E+ E +E
Sbjct: 885 SSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEE 944
Query: 62 GEEEDEEEEEEDDE 75
EEE++EEEEE+ E
Sbjct: 945 EEEEEDEEEEEELE 958
Score = 37.7 bits (86), Expect = 0.002
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 18 KEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGP 77
+E++E+ EE+ +E + E EEEE+ EEEE E ED E G E +E P
Sbjct: 925 EEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPP 984
Query: 78 AL 79
AL
Sbjct: 985 AL 986
Score = 36.2 bits (82), Expect = 0.006
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEE---------ENGAEEEEEETA 53
E+ E E +D +E++E EE +E ++E EEE E EE+EEE
Sbjct: 896 EEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEE 955
Query: 54 EDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQ 94
E E ED E EE P A E+ PK Q
Sbjct: 956 ELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPPESPPKVQ 996
Score = 34.7 bits (78), Expect = 0.017
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 45 AEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTE 97
A EE+ ++E EEE+EEEEEE++E + EEE++ + ++ E
Sbjct: 873 ALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEE 925
Score = 33.5 bits (75), Expect = 0.037
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 3 EKSVEAAAELSAKDLKEKKE--KVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED 60
E+ + A L+ + L + E + E + +E+VEEE + EE EDG ++
Sbjct: 1017 ERGADTAPTLAPEALPSQGEVEREGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDKV 1076
Query: 61 EGEEEDEEEEEEDDEGPALKRAAEEEDE 88
+ E EEE + E A +E+D+
Sbjct: 1077 QPPPETPAEEEMETETEAEALQEKEQDD 1104
Score = 30.4 bits (67), Expect = 0.31
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 21 KEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDE--EEEEEDDEGPA 78
+E VEE+ S E EE E+G+++ + EEE E E E E +E+E+DD
Sbjct: 1051 QELVEEEPSAPPTLLE--EETEDGSDKVQPPPETPAEEEMETETEAEALQEKEQDDTAAM 1108
Query: 79 L 79
L
Sbjct: 1109 L 1109
Score = 27.7 bits (60), Expect = 2.0
Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 23 KVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRA 82
+VEE + +ER + A + E +GE G E EEE P L
Sbjct: 1008 EVEEPGTEEERGADTAPTLAPEALPSQGEVEREGESPAAGPPPQELVEEEPSAPPTLLE- 1066
Query: 83 AEEEDEADPKRQKTENGA 100
E ED +D + E A
Sbjct: 1067 EETEDGSDKVQPPPETPA 1084
>gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo
sapiens]
Length = 142
Score = 58.9 bits (141), Expect = 8e-10
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 10 AELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEE 69
A SA+ + ++EK E+ R+E+++E E+ G E+EE E+ EEE+E EEE+EEE
Sbjct: 58 AGTSARKSQRREEKRREEKRREEKRRE--EKRREGKRREKEEEKEEEEEEEE-EEEEEEE 114
Query: 70 EEEDDEGPALKRAAEEEDEADPKR 93
EEE++E E E E + KR
Sbjct: 115 EEEEEEVSFSLATRERETETEEKR 138
Score = 48.5 bits (114), Expect = 1e-06
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 8 AAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDE 67
+A + ++ K ++EK E+ R+E+++E E+ +EEEEE E+ EEE+E EEE+E
Sbjct: 61 SARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEE 120
Query: 68 --------EEEEEDDE 75
E E E +E
Sbjct: 121 VSFSLATRERETETEE 136
Score = 38.1 bits (87), Expect = 0.002
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 13 SAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEE 72
S +KE+ + + +K EE+ E+ EE + + + E EEE+EE
Sbjct: 42 STSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEE 101
Query: 73 DDEGPALKRAAEEEDEAD 90
++E + EEE+E +
Sbjct: 102 EEEEEEEEEEEEEEEEEE 119
Score = 30.4 bits (67), Expect = 0.31
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 17/70 (24%)
Query: 28 ASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEED 87
++RK +++E EE EE+ E E+ EG+ ++EEE+E EE+
Sbjct: 61 SARKSQRREEKRREEKRREEKRRE-----EKRREGKRREKEEEKE------------EEE 103
Query: 88 EADPKRQKTE 97
E + + ++ E
Sbjct: 104 EEEEEEEEEE 113
>gi|169210053 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 57.8 bits (138), Expect = 2e-09
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 34 KKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKR 93
++EV EEEE EEE+EE E+ EEE+E EEE EE+EEE+++ + E+E D +
Sbjct: 120 EEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEIDTEI 179
Query: 94 QKTE 97
Q+T+
Sbjct: 180 QRTQ 183
Score = 49.7 bits (117), Expect = 5e-07
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 9 AAELSAKD-LKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDE 67
A E SA+ L ++E+VEE+ E +++ E+EE+ EEE+EE E+ EEE+E E +
Sbjct: 107 AEECSAQQGLPVEEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKM 166
Query: 68 EEEEEDDE 75
EEE+ ++E
Sbjct: 167 EEEKVEEE 174
Score = 36.6 bits (83), Expect = 0.004
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 14/75 (18%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED 60
+ E+ VE E ++ KE++++ +E+ KE +KE E+EEEE E+E
Sbjct: 118 VEEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKE---------EDEEEE-----EKEG 163
Query: 61 EGEEEDEEEEEEDDE 75
+ EE++ EEE D E
Sbjct: 164 KKMEEEKVEEEIDTE 178
Score = 33.9 bits (76), Expect = 0.028
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 10/54 (18%)
Query: 49 EEETAEDG-----EEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTE 97
EE +A+ G EE +E EEE EEEE+E++ K EEE+E + ++++ E
Sbjct: 108 EECSAQQGLPVEEEEVEEEEEEVEEEEKEEE-----KEEDEEEEEKEEEKEEDE 156
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 57.4 bits (137), Expect = 2e-09
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E+ E E ++ + +KE+ E+K +KE+KKE V+E+E EE+EE +E+ E
Sbjct: 2264 EEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSD 2323
Query: 63 EEEDEE----EEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
EEE+EE EEE D E LK+ E++ + +R+K+ G
Sbjct: 2324 EEEEEESCSLEEEVDREKEILKK--EKQFKLQEQRRKSLRG 2362
Score = 52.0 bits (123), Expect = 1e-07
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 19 EKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPA 78
++ E E + E + +E++E+ + EEEEE E+ E E+E E+EEE +E++EG
Sbjct: 2218 DEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEE 2277
Query: 79 LKRAAEEEDEADPKRQK 95
+ EEE++ K++K
Sbjct: 2278 KQVEKEEEEKKKKKKEK 2294
Score = 51.2 bits (121), Expect = 2e-07
Identities = 26/84 (30%), Positives = 50/84 (59%)
Query: 14 AKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEED 73
+++++ +++E++ S ++E EEEE EEE E E+ +EE+EGEE+ E+EEE+
Sbjct: 2227 SEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEE 2286
Query: 74 DEGPALKRAAEEEDEADPKRQKTE 97
+ ++ EE E + ++ E
Sbjct: 2287 KKKKKKEKKKEEVQEKEEVFEEKE 2310
Score = 48.9 bits (115), Expect = 9e-07
Identities = 28/84 (33%), Positives = 46/84 (54%)
Query: 14 AKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEED 73
AK + KEK + E ++ EE E+ +E E++ + EEE+E EEE+E EEEE
Sbjct: 2203 AKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEV 2262
Query: 74 DEGPALKRAAEEEDEADPKRQKTE 97
E ++ EE +E ++++ E
Sbjct: 2263 REEEEERKEEEEGEEKQVEKEEEE 2286
Score = 47.8 bits (112), Expect = 2e-06
Identities = 25/81 (30%), Positives = 46/81 (56%)
Query: 15 KDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDD 74
+ L ++ EK E +S +E ++E EE E EEEE ++ EE +E + E EEEE++
Sbjct: 2231 ESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKK 2290
Query: 75 EGPALKRAAEEEDEADPKRQK 95
+ K +E++E ++++
Sbjct: 2291 KKEKKKEEVQEKEEVFEEKEE 2311
Score = 46.6 bits (109), Expect = 4e-06
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 13 SAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEE 72
S + E+ E + ++ ++E EEE EE EEE + EEE + EEE EE++ E
Sbjct: 2222 SEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVE 2281
Query: 73 DDEGPALKRAAEEEDEADPKRQK 95
+E K+ E++ E ++++
Sbjct: 2282 KEEEEKKKKKKEKKKEEVQEKEE 2304
Score = 46.2 bits (108), Expect = 6e-06
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 4 KSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGE 63
+ +E+ + K E+ EE+ +ER++E V EEE E +EEE E+ + E E E
Sbjct: 2228 EEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEE--ERKEEEEGEEKQVEKEEE 2285
Query: 64 EEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTEN 98
E+ ++++E+ E K EE E ++TE+
Sbjct: 2286 EKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETES 2320
Score = 43.9 bits (102), Expect = 3e-05
Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 12/107 (11%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVE-EEENGAEEEEEETAEDGEEE 59
+S + E E ++ +E +E+ EE+ +E +++ VE EEE ++++E+ E+ +E+
Sbjct: 2243 LSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEK 2302
Query: 60 DEGEEEDEE-----------EEEEDDEGPALKRAAEEEDEADPKRQK 95
+E EE EE +EEE++E +L+ + E E K ++
Sbjct: 2303 EEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREKEILKKEKQ 2349
Score = 43.1 bits (100), Expect = 5e-05
Identities = 23/96 (23%), Positives = 55/96 (57%)
Query: 6 VEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEE 65
+E LS+++ +E++E+ E + ++E +EEE G E++ E+ E+ +++ + +++
Sbjct: 2237 LEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKK 2296
Query: 66 DEEEEEEDDEGPALKRAAEEEDEADPKRQKTENGAS 101
+E +E+E+ + +EEE E+ ++ E S
Sbjct: 2297 EEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCS 2332
Score = 43.1 bits (100), Expect = 5e-05
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDG-----E 57
EK ++E + +E++ + EE +E +KE E EE E+EEEE + E
Sbjct: 2238 EKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKE 2297
Query: 58 EEDEGEEEDEEEEEEDDEGPALKRAAEEEDE 88
E E EE EE+EE E + EEE+E
Sbjct: 2298 EVQEKEEVFEEKEEIMSEEETESLSDEEEEE 2328
Score = 40.0 bits (92), Expect = 4e-04
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 18 KEKKEKVEEKASRK-ERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEG 76
K K+ K +K K + + VE EE+ +EE E E ++E EE+EE EEE++
Sbjct: 2199 KRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEE-- 2256
Query: 77 PALKRAAEEEDEADPKRQKTENG 99
R EE E + +R++ E G
Sbjct: 2257 ----REEEEVREEEEERKEEEEG 2275
Score = 35.8 bits (81), Expect = 0.007
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 7 EAAAELSAKDLKEKKEKV---EEKASRKERK-----KEVVEEEENGAEEEEEETAEDGEE 58
++ ++ D EK+ ++ E+K +RK+RK + ++ +EE EEE + + E
Sbjct: 2115 QSKLDIKEWDFSEKRSELTKDEKKLARKQRKLANKMRRMINKEEKMTEEESKLARKHSEV 2174
Query: 59 EDEGEEEDEEEEEEDDEGPALKRAAEEEDEA 89
+ EEE EEEE P LKR + EA
Sbjct: 2175 ILDDEEEGGIEEEE--VIPFLKRRWRKRKEA 2203
Score = 34.7 bits (78), Expect = 0.017
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 21/114 (18%)
Query: 3 EKSVEAAAELSAKDLK-----EKKEKVEEKASRK-----------ERKKEVVEEEENGAE 46
EK + A +L+ K K EK + EEK ++K +K E + + E +
Sbjct: 1649 EKLSQEAEKLAQKRKKLAKKWEKVAREEEKLAKKGGKLAEVKNILAQKVEELPQREQNLD 1708
Query: 47 EEEEETAEDGEEEDEGEEE--DEEEEEEDDEGPAL---KRAAEEEDEADPKRQK 95
+E+E A++ EE + EE +EEE +EG + K+ AEEE+ +R+K
Sbjct: 1709 WQEKELAQELEELEWDMEELSWKEEELNQEEGKLVEEKKKLAEEEEALAWQREK 1762
Score = 34.3 bits (77), Expect = 0.022
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 18 KEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGP 77
+E K+ E S K ++++ +EEE EEE + +GEE+++ E++ +E+ +
Sbjct: 1519 EEWKQVWENMLSSKSKEQQYKDEEEVTL---EEEVSREGEEKEQQVTEEQRHIQEEHKWA 1575
Query: 78 AL--KRAAEEEDEADPKRQ 94
+ KRA E+ A +R+
Sbjct: 1576 RIHRKRARAEKKRAQEERK 1594
Score = 34.3 bits (77), Expect = 0.022
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDE 61
SEK E + K L K+ K+ K R K+E + EEE+ + E D EEE
Sbjct: 2126 SEKRSELTKD--EKKLARKQRKLANKMRRMINKEEKMTEEESKLARKHSEVILDDEEEGG 2183
Query: 62 GEEED 66
EEE+
Sbjct: 2184 IEEEE 2188
Score = 33.5 bits (75), Expect = 0.037
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 17 LKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEG 76
L E+K+K+ E+ ++E + EEE +EEE + E+E + +++ EEE+ G
Sbjct: 1742 LVEEKKKLAEEEEALAWQREKLSEEETKLAQEEELLIQ--EKEKLAQHKEKMPEEEERLG 1799
Query: 77 PALKRAAEEEDEADPKRQKTEN 98
++ E++ + KR++ N
Sbjct: 1800 RKREQLIEKKMKLAQKRERWIN 1821
Score = 32.3 bits (72), Expect = 0.082
Identities = 20/93 (21%), Positives = 48/93 (51%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDE 61
+ KS +A E K L +++EK+ + + ++E+++E++ EE ++ E+
Sbjct: 1474 TRKSWKAWKEEWEKRLLQEEEKLHQAGEKLSPEEEMLQEDKKLKWEEWKQVWENMLSSKS 1533
Query: 62 GEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQ 94
E++ ++EEE E + E+E + +++
Sbjct: 1534 KEQQYKDEEEVTLEEEVSREGEEKEQQVTEEQR 1566
Score = 32.3 bits (72), Expect = 0.082
Identities = 20/85 (23%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 11 ELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEE 70
E ++L K+E++ ++ + +K+ + EEE + E+ +E EE +EE+ +
Sbjct: 1722 EWDMEELSWKEEELNQEEGKLVEEKKKLAEEEEALAWQREKLSE--EETKLAQEEELLIQ 1779
Query: 71 EEDDEGPALKRAAEEEDEADPKRQK 95
E++ ++ EEE+ KR++
Sbjct: 1780 EKEKLAQHKEKMPEEEERLGRKREQ 1804
Score = 28.9 bits (63), Expect = 0.91
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKK--EVVEEEENGAEEEEEETAEDGEEED 60
E+ ++ +L ++ K+ E + S++++ K E V EE + E EE+ + EE+
Sbjct: 1507 EEMLQEDKKLKWEEWKQVWENMLSSKSKEQQYKDEEEVTLEEEVSREGEEKEQQVTEEQR 1566
Query: 61 EGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQK 95
+EE + A K+ A+EE + + +K
Sbjct: 1567 HIQEEHKWARIHRKRARAEKKRAQEERKLAQEEEK 1601
Score = 28.5 bits (62), Expect = 1.2
Identities = 21/77 (27%), Positives = 32/77 (41%)
Query: 19 EKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPA 78
EKK EE+ +E +K EE + EE + A +D+ E E + E
Sbjct: 1585 EKKRAQEERKLAQEEEKLAQEERQLAQEERKLAQAYVKITQDDREMAQAEGKFAQKEETL 1644
Query: 79 LKRAAEEEDEADPKRQK 95
+R + EA+ QK
Sbjct: 1645 AQRGEKLSQEAEKLAQK 1661
Score = 28.1 bits (61), Expect = 1.6
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 5 SVEAAAELSAKDLK---EKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDE 61
+V E+S K+ K +K K KA +KERK ++ E +EE + +E+ EE
Sbjct: 1380 NVTMGKEISKKEEKKTFQKSPKQGRKAVQKERKVGKIKREMT---KEERDMSEEVEEMAT 1436
Query: 62 GEEEDEEEE 70
EE+ ++E
Sbjct: 1437 LEEKVVKQE 1445
Score = 28.1 bits (61), Expect = 1.6
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 15 KDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEE 71
K++ +K+EK + S K+ +K V +E + G + + E T E+ + +E EE EE+
Sbjct: 1385 KEISKKEEKKTFQKSPKQGRKAVQKERKVG-KIKREMTKEERDMSEEVEEMATLEEK 1440
Score = 28.1 bits (61), Expect = 1.6
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 22 EKVEEKASRKE----RKKEVVEE-EENGAEEEEEETAEDGEEEDEGE-EEDEEEEEEDDE 75
+KVEE R++ ++KE+ +E EE + EE E+ ++EG+ E++++ E++E
Sbjct: 1695 QKVEELPQREQNLDWQEKELAQELEELEWDMEELSWKEEELNQEEGKLVEEKKKLAEEEE 1754
Query: 76 GPALKRAAEEEDE 88
A +R E+E
Sbjct: 1755 ALAWQREKLSEEE 1767
Score = 27.7 bits (60), Expect = 2.0
Identities = 18/83 (21%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 10 AELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEE------ETAEDGEEEDEGE 63
A + K + +K++ +E+ + ++++ +EE A+EE + + +D E + E
Sbjct: 1575 ARIHRKRARAEKKRAQEERKLAQEEEKLAQEERQLAQEERKLAQAYVKITQDDREMAQAE 1634
Query: 64 EEDEEEEEE-DDEGPALKRAAEE 85
+ ++EE G L + AE+
Sbjct: 1635 GKFAQKEETLAQRGEKLSQEAEK 1657
>gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens]
Length = 543
Score = 57.4 bits (137), Expect = 2e-09
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E+++EAA AKD + + EE+ KE +E EE A +EE E A++ EE EG
Sbjct: 455 EETIEAAKAEEAKDEPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAKEEEEGGEG 514
Query: 63 EEEDE----EEEEEDDEGPALKRAAEEED 87
EE +E EEEE+ EG ++AA+++D
Sbjct: 515 EEGEETKEAEEEEKKVEGAGEEQAAKKKD 543
Score = 48.1 bits (113), Expect = 1e-06
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEV-----VEEEENGAEE-EEEETAE 54
MS +S + ++ + + E+ E A +E K E EEEE EE EEEE AE
Sbjct: 434 MSTRSFPSYYTSHVQEEQIEVEETIEAAKAEEAKDEPPSEGEAEEEEKDKEEAEEEEAAE 493
Query: 55 DGEEEDEGEEEDEEEEE--EDDEGPALKRAAEEEDEAD 90
+ E E EE +EEEE E +EG K A EEE + +
Sbjct: 494 EEEAAKEESEEAKEEEEGGEGEEGEETKEAEEEEKKVE 531
Score = 46.2 bits (108), Expect = 6e-06
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 17 LKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEE----DEEEEEE 72
++E++ +VEE + ++ E G EEEE+ E+ EEE+ EEE +E EE +
Sbjct: 447 VQEEQIEVEETIEAAKAEEAKDEPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAK 506
Query: 73 DDEGPALKRAAEEEDEADPKRQKTE 97
++E EE EA+ + +K E
Sbjct: 507 EEEEGGEGEEGEETKEAEEEEKKVE 531
Score = 38.5 bits (88), Expect = 0.001
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 34 KKEVVEEEEN----GAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEA 89
++E +E EE AEE ++E +GE E EEE ++EE E++E + AA+EE E
Sbjct: 448 QEEQIEVEETIEAAKAEEAKDEPPSEGEAE---EEEKDKEEAEEEEAAEEEEAAKEESEE 504
Query: 90 DPKRQKTENG 99
+ ++ G
Sbjct: 505 AKEEEEGGEG 514
Score = 36.2 bits (82), Expect = 0.006
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 40 EEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
+EE EE E A+ E +DE E E EEEE D K AEEE+ A+ + E
Sbjct: 448 QEEQIEVEETIEAAKAEEAKDEPPSEGEAEEEEKD-----KEEAEEEEAAEEEEAAKEES 502
Query: 100 ASA 102
A
Sbjct: 503 EEA 505
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 57.0 bits (136), Expect = 3e-09
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 27/118 (22%)
Query: 7 EAAAELSAKDLKEKKEKV------EEKASRKERKKEVVEEEENGAEEEEEETA------- 53
E E +D K + E+ E S KE KKE EE+E E EEEE A
Sbjct: 455 EIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVK 514
Query: 54 --------EDGE-EEDEGEEEDEEEEE-----EDDEGPALKRAAEEEDEADPKRQKTE 97
E+GE EE+EG+EE+EEE+E + +EG + K + E++E + + +TE
Sbjct: 515 ATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETE 572
Score = 47.8 bits (112), Expect = 2e-06
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 20/103 (19%)
Query: 15 KDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEE--------- 65
+++ E+ + +EK+ +E + EE +EE++E AE+ EEE E EEE
Sbjct: 454 EEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPV 513
Query: 66 --------DEEEEEEDDEGPALKRAAEEEDEADPKRQKTENGA 100
+EE E+E++EG + EEEDE Q E G+
Sbjct: 514 KATAPEVKEEEGEKEEEEG---QEEEEEEDEGAKSDQAEEGGS 553
Score = 46.6 bits (109), Expect = 4e-06
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 19 EKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGE-EEDEEEEEEDDEGP 77
+++E+ E++ ++ ++ +E E+E +E+EE E E+GE E E E EE E +EE+ E
Sbjct: 533 QEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGE-QEEGETEAEAEGEEAEAKEEKKVEEK 591
Query: 78 ALKRAAEEEDEADPKRQKTENGAS 101
+ + A +EE AD K +K E S
Sbjct: 592 SEEVATKEELVADAKVEKPEKAKS 615
Score = 38.1 bits (87), Expect = 0.002
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 21 KEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALK 80
K VEEK K V E+ ++ + E A+ E +GE+++EEE+E + K
Sbjct: 658 KSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEK 717
Query: 81 RAAEEEDEAD-PKRQKTEN 98
+EE D P+++K E+
Sbjct: 718 VEKKEEKPKDVPEKKKAES 736
Score = 37.4 bits (85), Expect = 0.003
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 11 ELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEE 70
++ A LK + + VEE + + E E EE EE EE+ E EE EEE
Sbjct: 440 KVEAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEP 499
Query: 71 EEDDEGPALKRA--------------AEEEDEADPKRQKTENGASA 102
E ++E A K++ +EE+E + ++ + GA +
Sbjct: 500 EAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKS 545
Score = 37.4 bits (85), Expect = 0.003
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E EA AE + KE+K KVEEK+ K+E+V + + E+ + E++G
Sbjct: 568 EGETEAEAEGEEAEAKEEK-KVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKG 626
Query: 63 EEE-DEEEEEEDDEGPALKRAAEEEDEAD-PKRQKTENGAS 101
+ + EE + P K EE+ ++ PK E G S
Sbjct: 627 KSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKS 667
Score = 37.4 bits (85), Expect = 0.003
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 7 EAAAEL-----SAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED- 60
EA AE+ S K EK+ K E K ++E++KE E EE ++ A+ +ED
Sbjct: 741 EAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDI 800
Query: 61 ------EGEEEDEEEEEEDDEG 76
EG+EE E+E +E G
Sbjct: 801 AVNGEVEGKEEVEQETKEKGSG 822
Score = 36.2 bits (82), Expect = 0.006
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDE 61
S+++ E +E KE+ E+ E + + +E +EE EE+ EE A ++E
Sbjct: 545 SDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVA----TKEE 600
Query: 62 GEEEDEEEEEEDDEGPALKRAAEEEDEAD-PKRQKTENGAS 101
+ + E+ E + P K EE+ ++ PK E G S
Sbjct: 601 LVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKS 641
Score = 35.4 bits (80), Expect = 0.010
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 21/117 (17%)
Query: 4 KSVEAAAELSAKDLKEKKEKV------EEKASRKERK-KEVVEEEENGAEEEEEETAE-- 54
+ ++ AE+ + KE++EK EEK +KE K K+V E+++ + +EE AE
Sbjct: 688 EEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVV 747
Query: 55 ----------DGEEEDEGE--EEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
+ E ++EG+ ++++E+E+ EG + + +++ + K NG
Sbjct: 748 TITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNG 804
Score = 31.6 bits (70), Expect = 0.14
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED 60
+ EK+ + ++ K K E V + ++E +KEV E + E++EE +D E+
Sbjct: 674 VEEKAKSPVPKSPVEEAKSKAE-VGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKK 732
Query: 61 EGEEEDEE-----------------EEEEDDEGPALKRAAEEE---DEADPKRQKTENGA 100
+ E +E E+E +EG L++ E+E E + + ++ GA
Sbjct: 733 KAESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGA 792
Score = 30.0 bits (66), Expect = 0.41
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 1 MSEKSVEAAAELSAKDLKEK-------KEKVEEKASRKERKKEV-VEEEENGAEEEEEET 52
+ +++ E L + KEK +E+ +K ++ RK+++ V E G EE E+ET
Sbjct: 757 LEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQET 816
Query: 53 AEDGEEEDEGEEEDE 67
E G G EE++
Sbjct: 817 KEKGS----GREEEK 827
Score = 29.6 bits (65), Expect = 0.53
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 3 EKSVEAAAELSAKDLKEKKEK---VEEKA---------SRKERKKEVVEEEENGAEEEEE 50
E+ VE E KD+ EKK+ V+E+A S K ++ +EE ++E+E
Sbjct: 715 EEKVEKKEE-KPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKE 773
Query: 51 ETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
+ GE E E D+ + E A+ E ++E + + ++ +G
Sbjct: 774 KEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKEKGSG 822
Score = 27.7 bits (60), Expect = 2.0
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
Query: 18 KEKKEKVEEKASRKERK--KEVVEE---EENGAEEEEEETAEDGEEEDEGEEEDEE--EE 70
K +K KVE + + K +E++EE E+ +E EE TA E +EE +E EE
Sbjct: 435 KIQKPKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEE 494
Query: 71 EEDDEGPALKRAAEEEDEADPK 92
+E++ AEEE+ A K
Sbjct: 495 KEEEP------EAEEEEVAAKK 510
Score = 25.8 bits (55), Expect = 7.7
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 11 ELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEE 69
+LS D K+ +K EEK + +++ E +GA + ++ ++ +E EE EE+
Sbjct: 835 DLSPADEKKGGDKSEEKVVVTKTVEKITSEGGDGATKYITKSVTVTQKVEEHEETFEEK 893
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 57.0 bits (136), Expect = 3e-09
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 27/118 (22%)
Query: 7 EAAAELSAKDLKEKKEKV------EEKASRKERKKEVVEEEENGAEEEEEETA------- 53
E E +D K + E+ E S KE KKE EE+E E EEEE A
Sbjct: 79 EIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVK 138
Query: 54 --------EDGE-EEDEGEEEDEEEEE-----EDDEGPALKRAAEEEDEADPKRQKTE 97
E+GE EE+EG+EE+EEE+E + +EG + K + E++E + + +TE
Sbjct: 139 ATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETE 196
Score = 47.8 bits (112), Expect = 2e-06
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 20/103 (19%)
Query: 15 KDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEE--------- 65
+++ E+ + +EK+ +E + EE +EE++E AE+ EEE E EEE
Sbjct: 78 EEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPV 137
Query: 66 --------DEEEEEEDDEGPALKRAAEEEDEADPKRQKTENGA 100
+EE E+E++EG + EEEDE Q E G+
Sbjct: 138 KATAPEVKEEEGEKEEEEG---QEEEEEEDEGAKSDQAEEGGS 177
Score = 46.6 bits (109), Expect = 4e-06
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 19 EKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGE-EEDEEEEEEDDEGP 77
+++E+ E++ ++ ++ +E E+E +E+EE E E+GE E E E EE E +EE+ E
Sbjct: 157 QEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGE-QEEGETEAEAEGEEAEAKEEKKVEEK 215
Query: 78 ALKRAAEEEDEADPKRQKTENGAS 101
+ + A +EE AD K +K E S
Sbjct: 216 SEEVATKEELVADAKVEKPEKAKS 239
Score = 38.1 bits (87), Expect = 0.002
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 21 KEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALK 80
K VEEK K V E+ ++ + E A+ E +GE+++EEE+E + K
Sbjct: 282 KSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEK 341
Query: 81 RAAEEEDEAD-PKRQKTEN 98
+EE D P+++K E+
Sbjct: 342 VEKKEEKPKDVPEKKKAES 360
Score = 37.4 bits (85), Expect = 0.003
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 11 ELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEE 70
++ A LK + + VEE + + E E EE EE EE+ E EE EEE
Sbjct: 64 KVEAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEP 123
Query: 71 EEDDEGPALKRA--------------AEEEDEADPKRQKTENGASA 102
E ++E A K++ +EE+E + ++ + GA +
Sbjct: 124 EAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKS 169
Score = 37.4 bits (85), Expect = 0.003
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E EA AE + KE+K KVEEK+ K+E+V + + E+ + E++G
Sbjct: 192 EGETEAEAEGEEAEAKEEK-KVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKG 250
Query: 63 EEE-DEEEEEEDDEGPALKRAAEEEDEAD-PKRQKTENGAS 101
+ + EE + P K EE+ ++ PK E G S
Sbjct: 251 KSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKS 291
Score = 37.4 bits (85), Expect = 0.003
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 7 EAAAEL-----SAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED- 60
EA AE+ S K EK+ K E K ++E++KE E EE ++ A+ +ED
Sbjct: 365 EAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDI 424
Query: 61 ------EGEEEDEEEEEEDDEG 76
EG+EE E+E +E G
Sbjct: 425 AVNGEVEGKEEVEQETKEKGSG 446
Score = 36.2 bits (82), Expect = 0.006
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDE 61
S+++ E +E KE+ E+ E + + +E +EE EE+ EE A ++E
Sbjct: 169 SDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVA----TKEE 224
Query: 62 GEEEDEEEEEEDDEGPALKRAAEEEDEAD-PKRQKTENGAS 101
+ + E+ E + P K EE+ ++ PK E G S
Sbjct: 225 LVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKS 265
Score = 35.4 bits (80), Expect = 0.010
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 21/117 (17%)
Query: 4 KSVEAAAELSAKDLKEKKEKV------EEKASRKERK-KEVVEEEENGAEEEEEETAE-- 54
+ ++ AE+ + KE++EK EEK +KE K K+V E+++ + +EE AE
Sbjct: 312 EEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVV 371
Query: 55 ----------DGEEEDEGE--EEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
+ E ++EG+ ++++E+E+ EG + + +++ + K NG
Sbjct: 372 TITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNG 428
Score = 31.6 bits (70), Expect = 0.14
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED 60
+ EK+ + ++ K K E V + ++E +KEV E + E++EE +D E+
Sbjct: 298 VEEKAKSPVPKSPVEEAKSKAE-VGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKK 356
Query: 61 EGEEEDEE-----------------EEEEDDEGPALKRAAEEE---DEADPKRQKTENGA 100
+ E +E E+E +EG L++ E+E E + + ++ GA
Sbjct: 357 KAESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGA 416
Score = 30.0 bits (66), Expect = 0.41
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 1 MSEKSVEAAAELSAKDLKEK-------KEKVEEKASRKERKKEV-VEEEENGAEEEEEET 52
+ +++ E L + KEK +E+ +K ++ RK+++ V E G EE E+ET
Sbjct: 381 LEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQET 440
Query: 53 AEDGEEEDEGEEEDE 67
E G G EE++
Sbjct: 441 KEKGS----GREEEK 451
Score = 29.6 bits (65), Expect = 0.53
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 3 EKSVEAAAELSAKDLKEKKEK---VEEKA---------SRKERKKEVVEEEENGAEEEEE 50
E+ VE E KD+ EKK+ V+E+A S K ++ +EE ++E+E
Sbjct: 339 EEKVEKKEE-KPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKE 397
Query: 51 ETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
+ GE E E D+ + E A+ E ++E + + ++ +G
Sbjct: 398 KEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKEKGSG 446
Score = 27.7 bits (60), Expect = 2.0
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
Query: 18 KEKKEKVEEKASRKERK--KEVVEE---EENGAEEEEEETAEDGEEEDEGEEEDEE--EE 70
K +K KVE + + K +E++EE E+ +E EE TA E +EE +E EE
Sbjct: 59 KIQKPKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEE 118
Query: 71 EEDDEGPALKRAAEEEDEADPK 92
+E++ AEEE+ A K
Sbjct: 119 KEEEP------EAEEEEVAAKK 134
Score = 25.8 bits (55), Expect = 7.7
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 11 ELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEE 69
+LS D K+ +K EEK + +++ E +GA + ++ ++ +E EE EE+
Sbjct: 459 DLSPADEKKGGDKSEEKVVVTKTVEKITSEGGDGATKYITKSVTVTQKVEEHEETFEEK 517
>gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens]
Length = 1083
Score = 56.6 bits (135), Expect = 4e-09
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 14 AKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEED 73
++D +E+ E++S E + EV EE + A E+EE ED EEE+E EE DEEEEEED
Sbjct: 4 SEDSNFSEEEDSERSSDGE-EAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEED 62
Query: 74 DEGPALK 80
D+ P K
Sbjct: 63 DDRPPKK 69
Score = 45.1 bits (105), Expect = 1e-05
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 10 AELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEE 69
+ S ++ E+ EE +ER+ E+E E+EEEE E+ +E+E EE+D+
Sbjct: 7 SNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRP 66
Query: 70 EEEDDEGPALKRAAEEEDEADPKRQKTENGA 100
++ G + A+ +DE + + Q E+GA
Sbjct: 67 PKKPRHGGFILDEADVDDEYEDEDQ-WEDGA 96
Score = 35.8 bits (81), Expect = 0.007
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 2 SEKSVEAAAELSA--KDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDG--- 56
S S E +E S+ ++ + +E+ S KE + E EEEE E +EEE ED
Sbjct: 7 SNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRP 66
Query: 57 -----------EEEDEGEEEDEEEEEEDDEGPALKRAAE------EEDEADPKR 93
+E D +E ++E++ ED L++A+ +ED + +R
Sbjct: 67 PKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKASNIDNVVLDEDRSGARR 120
>gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 56.6 bits (135), Expect = 4e-09
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 14 AKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEED 73
++D +E+ E++S E + EV EE + A E+EE ED EEE+E EE DEEEEEED
Sbjct: 4 SEDSNFSEEEDSERSSDGE-EAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEED 62
Query: 74 DEGPALK 80
D+ P K
Sbjct: 63 DDRPPKK 69
Score = 45.1 bits (105), Expect = 1e-05
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 10 AELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEE 69
+ S ++ E+ EE +ER+ E+E E+EEEE E+ +E+E EE+D+
Sbjct: 7 SNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRP 66
Query: 70 EEEDDEGPALKRAAEEEDEADPKRQKTENGA 100
++ G + A+ +DE + + Q E+GA
Sbjct: 67 PKKPRHGGFILDEADVDDEYEDEDQ-WEDGA 96
Score = 39.3 bits (90), Expect = 7e-04
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED- 60
S S E +E S+ + + ++ A+ E+++E +EEE EEEEEE E+ EEED
Sbjct: 7 SNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEE---EEEEEEYDEEEEEEDD 63
Query: 61 ---------------EGEEEDEEEEEEDDEGPALKRAAEEEDEA 89
E + +DE E+E+ E A +EE EA
Sbjct: 64 DRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEA 107
Score = 35.4 bits (80), Expect = 0.010
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDG------ 56
E+ E +++ ++ E++ +E + E EEEE +EEEEE +D
Sbjct: 12 EEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPR 71
Query: 57 ------EEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEAD 90
+E D +E ++E++ ED L++ E D
Sbjct: 72 HGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNID 111
Score = 29.6 bits (65), Expect = 0.53
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKE-----VVEEEENGAEEEEEETAEDG 56
SEK E E ++ +E E+ EE+ + KK +++E + E E+E+ EDG
Sbjct: 36 SEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDG 95
Query: 57 EEEDEGEEEDEEEEEEDD 74
E D E+E+ E D+
Sbjct: 96 AE-DILEKEEIEASNIDN 112
>gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 56.6 bits (135), Expect = 4e-09
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 14 AKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEED 73
++D +E+ E++S E + EV EE + A E+EE ED EEE+E EE DEEEEEED
Sbjct: 4 SEDSNFSEEEDSERSSDGE-EAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEED 62
Query: 74 DEGPALK 80
D+ P K
Sbjct: 63 DDRPPKK 69
Score = 45.1 bits (105), Expect = 1e-05
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 10 AELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEE 69
+ S ++ E+ EE +ER+ E+E E+EEEE E+ +E+E EE+D+
Sbjct: 7 SNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRP 66
Query: 70 EEEDDEGPALKRAAEEEDEADPKRQKTENGA 100
++ G + A+ +DE + + Q E+GA
Sbjct: 67 PKKPRHGGFILDEADVDDEYEDEDQ-WEDGA 96
Score = 39.3 bits (90), Expect = 7e-04
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED- 60
S S E +E S+ + + ++ A+ E+++E +EEE EEEEEE E+ EEED
Sbjct: 7 SNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEE---EEEEEEYDEEEEEEDD 63
Query: 61 ---------------EGEEEDEEEEEEDDEGPALKRAAEEEDEA 89
E + +DE E+E+ E A +EE EA
Sbjct: 64 DRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEA 107
Score = 35.4 bits (80), Expect = 0.010
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDG------ 56
E+ E +++ ++ E++ +E + E EEEE +EEEEE +D
Sbjct: 12 EEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPR 71
Query: 57 ------EEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEAD 90
+E D +E ++E++ ED L++ E D
Sbjct: 72 HGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNID 111
Score = 29.6 bits (65), Expect = 0.53
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKE-----VVEEEENGAEEEEEETAEDG 56
SEK E E ++ +E E+ EE+ + KK +++E + E E+E+ EDG
Sbjct: 36 SEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDG 95
Query: 57 EEEDEGEEEDEEEEEEDD 74
E D E+E+ E D+
Sbjct: 96 AE-DILEKEEIEASNIDN 112
>gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 56.6 bits (135), Expect = 4e-09
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 14 AKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEED 73
++D +E+ E++S E + EV EE + A E+EE ED EEE+E EE DEEEEEED
Sbjct: 4 SEDSNFSEEEDSERSSDGE-EAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEED 62
Query: 74 DEGPALK 80
D+ P K
Sbjct: 63 DDRPPKK 69
Score = 45.1 bits (105), Expect = 1e-05
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 10 AELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEE 69
+ S ++ E+ EE +ER+ E+E E+EEEE E+ +E+E EE+D+
Sbjct: 7 SNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRP 66
Query: 70 EEEDDEGPALKRAAEEEDEADPKRQKTENGA 100
++ G + A+ +DE + + Q E+GA
Sbjct: 67 PKKPRHGGFILDEADVDDEYEDEDQ-WEDGA 96
Score = 39.3 bits (90), Expect = 7e-04
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED- 60
S S E +E S+ + + ++ A+ E+++E +EEE EEEEEE E+ EEED
Sbjct: 7 SNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEE---EEEEEEYDEEEEEEDD 63
Query: 61 ---------------EGEEEDEEEEEEDDEGPALKRAAEEEDEA 89
E + +DE E+E+ E A +EE EA
Sbjct: 64 DRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEA 107
Score = 35.4 bits (80), Expect = 0.010
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDG------ 56
E+ E +++ ++ E++ +E + E EEEE +EEEEE +D
Sbjct: 12 EEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPR 71
Query: 57 ------EEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEAD 90
+E D +E ++E++ ED L++ E D
Sbjct: 72 HGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNID 111
Score = 29.6 bits (65), Expect = 0.53
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKE-----VVEEEENGAEEEEEETAEDG 56
SEK E E ++ +E E+ EE+ + KK +++E + E E+E+ EDG
Sbjct: 36 SEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDG 95
Query: 57 EEEDEGEEEDEEEEEEDD 74
E D E+E+ E D+
Sbjct: 96 AE-DILEKEEIEASNIDN 112
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 56.6 bits (135), Expect = 4e-09
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 12/91 (13%)
Query: 19 EKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED------EGEEEDEEEEEE 72
E+ EKVE E K+ EEEE EEEE+E +E+ EEE+ EG+EEDE+ +E
Sbjct: 513 EETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDE 572
Query: 73 DDEG------PALKRAAEEEDEADPKRQKTE 97
D G P+ + +++ E ++D R K E
Sbjct: 573 KDSGKTLDKKPSKEMSSDSEYDSDDDRTKEE 603
Score = 48.9 bits (115), Expect = 9e-07
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 25 EEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAE 84
+E+ + E K +E +EN EEEEE EEE+E +EE EEEEEE+ E + E
Sbjct: 512 DEETEKVEGNKVHIEVKENPEEEEEE------EEEEEEDEESEEEEEEEGESEGSEGDEE 565
Query: 85 EEDEADPK 92
+E +D K
Sbjct: 566 DEKVSDEK 573
Score = 42.4 bits (98), Expect = 8e-05
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 2 SEKSVEA--AAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEE 59
SE+ E AAE + K+KK+K ++K ++E++KE + + +E +EE
Sbjct: 295 SEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEE 354
Query: 60 DEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTE 97
+E ++ +EEE + E KR EE E + + +K +
Sbjct: 355 EERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQ 392
Score = 42.0 bits (97), Expect = 1e-04
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 16/97 (16%)
Query: 8 AAAELSAKDLKEKKEKVEEKASRKERKKEV--VEEEENGAEEEEEETAE----------- 54
AA E+ + + EK+E +E E +++ E A +EE E E
Sbjct: 471 AAVEVMEQGVPEKEETPPPVEPEEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKEN 530
Query: 55 -DGEEEDEGEEEDEE--EEEEDDEGPALKRAAEEEDE 88
+ EEE+E EEE++E EEEE++EG + +EEDE
Sbjct: 531 PEEEEEEEEEEEEDEESEEEEEEEGESEGSEGDEEDE 567
Score = 39.3 bits (90), Expect = 7e-04
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDE 61
S+ +V+A E AK LKE EE+ ++E ++ + EE A+ +EEE E + E +
Sbjct: 337 SKATVKAMQEALAK-LKE-----EEERQKREEEERIKRLEELEAKRKEEERLEQEKRERK 390
Query: 62 GEEEDEEEEEEDDEGPALKRAAEE 85
++E E +E EG L ++ E
Sbjct: 391 KQKEKERKERLKKEGKLLTKSQRE 414
Score = 37.7 bits (86), Expect = 0.002
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 18/105 (17%)
Query: 11 ELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEE------ 64
E KD ++KE + + K V+ A EE+ ET E+++EG++
Sbjct: 260 ETGKKDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKK 319
Query: 65 ----EDEEEEEEDDEGP--ALKRAAEE------EDEADPKRQKTE 97
E EE+E+E +GP A +A +E E+E KR++ E
Sbjct: 320 KKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEE 364
Score = 37.0 bits (84), Expect = 0.003
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 15 KDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDD 74
K K+KK+K EK +++ KK+ + A +E ++ EE + EEE+ + E+
Sbjct: 313 KKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEEL 372
Query: 75 EGPALKRAAEEEDEADPKRQK 95
E + E+++ + K+QK
Sbjct: 373 EAKRKEEERLEQEKRERKKQK 393
Score = 37.0 bits (84), Expect = 0.003
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 15 KDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDD 74
K KE+KEK ++K K K + E EEEE + E+ EE + EE E + +E++
Sbjct: 322 KGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREE-EERIKRLEELEAKRKEEE 380
Query: 75 EGPALKRAAEEEDEADPKRQKTENG 99
KR +++ E + K + + G
Sbjct: 381 RLEQEKRERKKQKEKERKERLKKEG 405
Score = 34.7 bits (78), Expect = 0.017
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 17/91 (18%)
Query: 21 KEKVEEKASRKERKKEVVEEEENGAEE-EEEETAEDGEEEDEGEEEDEEEEEED------ 73
K ++KA +KER+++ +EE+ + +E+E E G+++ ++E + + EE+
Sbjct: 226 KTVAQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKV 285
Query: 74 ----------DEGPALKRAAEEEDEADPKRQ 94
+E AAE+++E D K++
Sbjct: 286 TVDTGVIPASEEKAETPTAAEDDNEGDKKKK 316
Score = 34.7 bits (78), Expect = 0.017
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 11 ELSAKDLKEKKEKVEEKASRKE-----RKKEVVEEEENGAEEEEEETAEDGEEEDEGEEE 65
E+ +KD KK + E RK+ KEV E E A E E +EE E
Sbjct: 432 EVPSKDSLPKKRPIYEDKKRKKIPQQLESKEVSESMELCAAVEVMEQGVPEKEETPPPVE 491
Query: 66 DEEEEEEDDEGPALKRAAEEEDEAD 90
EEEE+ +D G A ++E +
Sbjct: 492 PEEEEDTEDAGLDDWEAMASDEETE 516
Score = 33.9 bits (76), Expect = 0.028
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 19/119 (15%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKAS-RKERKKEVVE-------EEENGAEEEEEETA 53
S K A + + K +E+K++ EEKA RK ++KE +E +++ + EEET
Sbjct: 222 SFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETV 281
Query: 54 EDGEEEDEGEEEDEEEE-------EEDDEGPALKRAAE----EEDEADPKRQKTENGAS 101
+ D G EE+ E+D+EG K+ + E++E + +++K + A+
Sbjct: 282 KSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKAT 340
Score = 33.1 bits (74), Expect = 0.048
Identities = 22/102 (21%), Positives = 49/102 (48%), Gaps = 22/102 (21%)
Query: 11 ELSAKDLKEK-------------KEKVEEKASRKERKKEVVEEEENGAEEEEEET----- 52
E ++KD K+K E++E+K S+ ++ + E +G++++++
Sbjct: 90 EFTSKDKKKKGQKGKKQSFDDNDSEELEDKDSKSKKTAKPKVEMYSGSDDDDDFNKLPKK 149
Query: 53 ----AEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEAD 90
A+ ++ +G EEDE+ ++ E + + E DE+D
Sbjct: 150 AKGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGESGDESD 191
Score = 30.8 bits (68), Expect = 0.24
Identities = 15/75 (20%), Positives = 38/75 (50%)
Query: 27 KASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEE 86
K +K +K + E+G E+++ + + E+++ E ++ D+E L++ E+E
Sbjct: 198 KGQKKNQKNKPGPNIESGNEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKE 257
Query: 87 DEADPKRQKTENGAS 101
+ K+ +++ S
Sbjct: 258 ELETGKKDQSKQKES 272
Score = 30.0 bits (66), Expect = 0.41
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Query: 9 AAELSAKDLKEKKEKVEEKASR-KERKKEVVEEEENGAEEEEEETAEDGEEED------- 60
AAE+ +++E + K + KE+KK+ +E++ E EE G + D
Sbjct: 23 AAEIEGAGAAKEQEPQKSKGKKKKEKKKQDFDEDDILKELEELSLEAQGIKADRETVAVK 82
Query: 61 --EGEEEDEEEEEEDDEGPALKRA------AEEEDEADPKRQKT 96
E EE+ +++ +G K+ +EE ++ D K +KT
Sbjct: 83 PTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELEDKDSKSKKT 126
Score = 28.9 bits (63), Expect = 0.91
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 18/101 (17%)
Query: 2 SEKSVEAAAEL-SAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEE- 59
S+K+ + E+ S D + K+ +KA K +K ++ +G+EE+E+ + + E
Sbjct: 123 SKKTAKPKVEMYSGSDDDDDFNKLPKKAKGKAQKSN---KKWDGSEEDEDNSKKIKERSR 179
Query: 60 --DEGEEEDEEEE-----------EEDDEGPALKRAAEEED 87
GE DE +E +++ GP ++ E++D
Sbjct: 180 INSSGESGDESDEFLQSRKGQKKNQKNKPGPNIESGNEDDD 220
>gi|28274705 family with sequence similarity 9, member A [Homo
sapiens]
Length = 332
Score = 56.6 bits (135), Expect = 4e-09
Identities = 30/67 (44%), Positives = 43/67 (64%)
Query: 9 AAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEE 68
AA +A+ + + E+ EEK +E+++E E EE G EE EE GE E+ EEE+EE
Sbjct: 209 AAAAAAEVIVVEDEEEEEKEEEEEKEEEEEEGEEEGGGEEGEEGGGGGEGEETEEEEEEE 268
Query: 69 EEEEDDE 75
EEEE++E
Sbjct: 269 EEEEEEE 275
Score = 55.8 bits (133), Expect = 7e-09
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 4 KSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGE 63
++ AAAE+ + +E++EK EE+ KE ++E EEE G E EE +GEE +E E
Sbjct: 208 EAAAAAAEVIVVEDEEEEEKEEEE--EKEEEEEEGEEEGGGEEGEEGGGGGEGEETEEEE 265
Query: 64 EEDEEEEEED 73
EE+EEEEEE+
Sbjct: 266 EEEEEEEEEE 275
Score = 53.5 bits (127), Expect = 3e-08
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 5 SVEAAAELSAKDLKEKKEKVE-EKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGE 63
+ EAAA A + VE E+ KE ++E EEEE G EE E E+G EGE
Sbjct: 200 AAEAAAAAEAAAAAAEVIVVEDEEEEEKEEEEEKEEEEEEGEEEGGGEEGEEGGGGGEGE 259
Query: 64 EEDEEEEEEDDEGPALKRAAEEEDEADPKRQK 95
E +EEEEEE++E EE+ +A ++QK
Sbjct: 260 ETEEEEEEEEEE------EEEEQIKAFQEKQK 285
Score = 50.1 bits (118), Expect = 4e-07
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED 60
++EK + AE + + +A+ + VVE+EE EEE+EE E EEE+
Sbjct: 182 IAEKQKDDEAEEAEAAAAAAEAAAAAEAAAAAAEVIVVEDEE---EEEKEEEEEKEEEEE 238
Query: 61 EGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTE 97
EGEEE EE E+ G EEE+E + + ++ E
Sbjct: 239 EGEEEGGGEEGEEGGGGGEGEETEEEEEEEEEEEEEE 275
Score = 48.1 bits (113), Expect = 1e-06
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E AAA +A + E E ++E EEEE EEEE E GEE +EG
Sbjct: 193 EAEAAAAAAEAAAAAEAAAAAAEVIVVEDEEEEEKEEEEEKEEEEEEGEEEGGGEEGEEG 252
Query: 63 --------EEEDEEEEEEDDEGPALKRAAEEE 86
EE+EEEEEE++E +K E++
Sbjct: 253 GGGGEGEETEEEEEEEEEEEEEEQIKAFQEKQ 284
Score = 45.4 bits (106), Expect = 9e-06
Identities = 29/88 (32%), Positives = 41/88 (46%)
Query: 7 EAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEED 66
+ A E A + E A+ V +EEE EEEEE+ E+ E E+EG E+
Sbjct: 189 DEAEEAEAAAAAAEAAAAAEAAAAAAEVIVVEDEEEEEKEEEEEKEEEEEEGEEEGGGEE 248
Query: 67 EEEEEEDDEGPALKRAAEEEDEADPKRQ 94
EE EG + EEE+E + + Q
Sbjct: 249 GEEGGGGGEGEETEEEEEEEEEEEEEEQ 276
Score = 42.7 bits (99), Expect = 6e-05
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAE----EEEEETAEDGE 57
+ K + E A+ K+ + + E A+ E AE E+EEE ++ E
Sbjct: 171 TRKLLNVLKEYIAEKQKDDEAEEAEAAAAAAEAAAAAEAAAAAAEVIVVEDEEEEEKEEE 230
Query: 58 EEDEGEEEDEEEE---EEDDEGPALKRAAEEEDEADPKRQKTE 97
EE E EEE+ EEE EE +EG E E+E + + ++ E
Sbjct: 231 EEKEEEEEEGEEEGGGEEGEEGGGGGEGEETEEEEEEEEEEEE 273
Score = 34.7 bits (78), Expect = 0.017
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 16/98 (16%)
Query: 17 LKEKKEKVEEKASRKERK-----KEVVEEEENGAEEEEEETAEDGEEEDEGEEE------ 65
LK+K+ K +++ R RK KE + E++ E EE E A E E
Sbjct: 156 LKKKQLKRQKRDYRHTRKLLNVLKEYIAEKQKDDEAEEAEAAAAAAEAAAAAEAAAAAAE 215
Query: 66 ----DEEEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
++EEEEE +E K EEE E + ++ E G
Sbjct: 216 VIVVEDEEEEEKEEEEE-KEEEEEEGEEEGGGEEGEEG 252
>gi|239050813 lipoxygenase homology domains 1 isoform 1 [Homo
sapiens]
Length = 2211
Score = 56.2 bits (134), Expect = 5e-09
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Query: 4 KSVEAAAELSAKDLKEK--------KEKVEEKASRKERKKEVVEEEENGAEEEEEETAED 55
+ V+ E A+ KEK KE+++ K RK++K++ +EE+ G EEE + E
Sbjct: 904 REVDLTPEEEARKKKEKDKLRQLLKKERLKAKLQRKKKKRKGSDEEDEGEEEESSSSEES 963
Query: 56 GEEEDEGEEEDEEEEEEDDEGPALKRAAEE 85
EE+E EEE+EEEE GP ++ E+
Sbjct: 964 SSEEEEMEEEEEEEE----FGPGMQEVIEQ 989
Score = 41.2 bits (95), Expect = 2e-04
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 12 LSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDG-EEEDEGEEEDEEEE 70
L +++ E+ K K++ ++++++E A+ + ++ G +EEDEGEEE+
Sbjct: 901 LVVREVDLTPEEEARKKKEKDKLRQLLKKERLKAKLQRKKKKRKGSDEEDEGEEEESSSS 960
Query: 71 EEDDEGPALKRAAEEEDEADPKRQK 95
EE EEE+E P Q+
Sbjct: 961 EESSSEEEEMEEEEEEEEFGPGMQE 985
>gi|4504425 high-mobility group box 1 [Homo sapiens]
Length = 215
Score = 55.8 bits (133), Expect = 7e-09
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 11 ELSAKDLKEKKEK----VEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEED 66
E A LKEK EK K KK VV+ E++ ++EEEE ED E+E+E E+E+
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 204
Query: 67 EEEEEEDDE 75
+E+EEEDD+
Sbjct: 205 DEDEEEDDD 213
Score = 49.3 bits (116), Expect = 7e-07
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED 60
+ EK + A AK + +K KA + ++KKE E+EE+ +EEEEE +EED
Sbjct: 151 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE-----DEED 205
Query: 61 EGEEEDEEEE 70
E EEED+++E
Sbjct: 206 EDEEEDDDDE 215
Score = 48.5 bits (114), Expect = 1e-06
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRK-----ERKKEVVEEEENGAEEEEEETAEDGE 57
EK E KD+ + K + A++K E+ K+ EEEE+ +EE+EE ED E
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 204
Query: 58 EEDEGEEEDEE 68
+EDE E++D+E
Sbjct: 205 DEDEEEDDDDE 215
Score = 37.4 bits (85), Expect = 0.003
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 13 SAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEE 72
+A D K+ EK K K K + + ++ + + + + EEE++EE+EE
Sbjct: 136 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 195
Query: 73 DDEGPALKRAAEEEDEADPKRQKTEN 98
D+E EEEDE D ++ ++
Sbjct: 196 DEE--------EEEDEEDEDEEEDDD 213
Score = 30.4 bits (67), Expect = 0.31
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 19 EKKEKVEEKASRKERK--KEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEG 76
+ K+ E+KA++ + K K++ G + + A+ G + E ++ +EEEE++++
Sbjct: 139 DDKQPYEKKAAKLKEKYEKDIAAYRAKG----KPDAAKKGVVKAEKSKKKKEEEEDEEDE 194
Query: 77 PALKRAAEEEDEADPKRQKTE 97
+ +EEDE + + E
Sbjct: 195 EDEEEEEDEEDEDEEEDDDDE 215
>gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens]
Length = 569
Score = 55.8 bits (133), Expect = 7e-09
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 15 KDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDD 74
+++KEK+E+ +K ++K+E EEEE +++EEE + E+EGE +DEE+E+ED
Sbjct: 371 QEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDEEDEDEDG 430
Query: 75 EGPALKRAAEEEDEADPKRQKT 96
+ E E + DP ++T
Sbjct: 431 -----GQKPEGEPQQDPGTEET 447
Score = 47.8 bits (112), Expect = 2e-06
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 15 KDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDD 74
+D + ++ ++ K RK + ++E EEEE + E+ ++++E EEE+EEE ++ +
Sbjct: 348 EDQEARRHRLHSKDQRKRMR--AFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKE 405
Query: 75 EGPALKRAAEEEDEADPKRQKTENG 99
E ++ EEE E+ + + E+G
Sbjct: 406 EEEEIRNKNEEEGESKDEEDEDEDG 430
Score = 46.2 bits (108), Expect = 6e-06
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 1 MSEKSVEAAA-ELSAKDLKEKKEKVEEKASRKERKKEV-VEEEENGAEEEEEETAEDGEE 58
M EK E E K +EK+E+ EE+ +KE ++E+ + EE G ++EE+ EDG +
Sbjct: 373 MKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDEEDEDEDGGQ 432
Query: 59 EDEGEEEDEEEEEE 72
+ EGE + + EE
Sbjct: 433 KPEGEPQQDPGTEE 446
Score = 45.8 bits (107), Expect = 7e-06
Identities = 27/88 (30%), Positives = 44/88 (50%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
++ ++ E K +E K+K E++ +E K+ EEEE + EEE ++D E+EDE
Sbjct: 370 QQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDEEDEDED 429
Query: 63 EEEDEEEEEEDDEGPALKRAAEEEDEAD 90
+ E E + D G EE+ D
Sbjct: 430 GGQKPEGEPQQDPGTEETYGEVEEEPLD 457
Score = 44.3 bits (103), Expect = 2e-05
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 12 LSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEE-- 69
L +KD +++ +++ KE ++ EEE EE+EEE EEE+ ++E+EEE
Sbjct: 357 LHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEE-----EEEEMKQKEEEEEIR 411
Query: 70 EEEDDEGPALKRAAEEEDEADPKRQKTE 97
+ ++EG + +EEDE + QK E
Sbjct: 412 NKNEEEG----ESKDEEDEDEDGGQKPE 435
Score = 42.4 bits (98), Expect = 8e-05
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAED-GEEE 59
M +K + E KE++E++ K + K+ +E+E+G ++ E E +D G EE
Sbjct: 387 MKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDEEDEDEDGGQKPEGEPQQDPGTEE 446
Query: 60 DEGEEEDEEEEEEDDE 75
GE E+E +E D+
Sbjct: 447 TYGEVEEEPLDEAQDD 462
Score = 30.8 bits (68), Expect = 0.24
Identities = 21/91 (23%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 11 ELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDE--- 67
E ++D + E +++A R + + ++E +E +EE+E ++E+E
Sbjct: 335 EEESEDEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKE-----KEEEEMKKEEEMKK 389
Query: 68 EEEEEDDEGPALKRAAEEEDEADPKRQKTEN 98
+EE+E++E +K+ EEE+ + ++ E+
Sbjct: 390 KEEKEEEEEEEMKQKEEEEEIRNKNEEEGES 420
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 55.5 bits (132), Expect = 9e-09
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 19 EKKEKVEEKASRKERKKEVVEEEENGAEEEE-----EETAEDGEEEDEGEEEDEEEEEED 73
E +E+ EE+ +E + E EEEE G EEEE EE E+ E E+EG+ + +EEEEED
Sbjct: 404 EGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEED 463
Query: 74 DEGPALKRAAEE 85
+E + AE+
Sbjct: 464 EESSSEGLEAED 475
Score = 53.9 bits (128), Expect = 3e-08
Identities = 31/59 (52%), Positives = 35/59 (59%), Gaps = 9/59 (15%)
Query: 39 EEEENGAEEEEEETAEDGEEEDEGEEEDE---------EEEEEDDEGPALKRAAEEEDE 88
EEEE EEEEEE E EEE+EGEEE+E EEEE ++EG EEEDE
Sbjct: 406 EEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDE 464
Score = 50.8 bits (120), Expect = 2e-07
Identities = 30/58 (51%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 40 EEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTE 97
EEE EEEEEE +GEEE EEE EEEEEE EG L E E+E D + E
Sbjct: 406 EEEEEEEEEEEEEEGEGEEE---EEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEE 460
Score = 50.1 bits (118), Expect = 4e-07
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 15/75 (20%)
Query: 34 KKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEED------ 87
K E EEEE EEEEEE EEE EGEEE+EE EEE++EG + EEE+
Sbjct: 402 KSEGEEEEE---EEEEEE-----EEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGD 453
Query: 88 -EADPKRQKTENGAS 101
++D + ++ E +S
Sbjct: 454 VDSDEEEEEDEESSS 468
Score = 40.0 bits (92), Expect = 4e-04
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 42 ENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGP 77
E G + + + ED EEED+ +E+D+++EE+ DE P
Sbjct: 505 EGGEDSDSDSEEEDDEEEDDEDEDDDDDEEDGDEVP 540
Score = 39.3 bits (90), Expect = 7e-04
Identities = 26/97 (26%), Positives = 42/97 (43%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEG 62
E+ E E ++ +E+ E+ EE+ E E E EE G + +EE ED E EG
Sbjct: 411 EEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDEESSSEG 470
Query: 63 EEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENG 99
E ++ + + G + +E+ P E G
Sbjct: 471 LEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGG 507
Score = 35.4 bits (80), Expect = 0.010
Identities = 35/129 (27%), Positives = 49/129 (37%), Gaps = 58/129 (44%)
Query: 18 KEKKEKVEEKASRKERKKEVVEEEENGAEEEE----EETAEDG-----EEEDEGEE---- 64
+E++E+ EE+ +E ++E EEEE G E EE EE E+G EEE+E EE
Sbjct: 410 EEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDEESSSE 469
Query: 65 ---------------------------------------------EDEEEEEEDDEGPAL 79
E+E++EEEDDE
Sbjct: 470 GLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDSDSEEEDDEEEDDEDEDD 529
Query: 80 KRAAEEEDE 88
E+ DE
Sbjct: 530 DDDEEDGDE 538
Score = 35.0 bits (79), Expect = 0.013
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 39 EEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPAL 79
E+ ++ +EEE++E +D +E+D+ +EED +E G A+
Sbjct: 508 EDSDSDSEEEDDEEEDDEDEDDDDDEEDGDEVPVPSFGEAM 548
Score = 34.3 bits (77), Expect = 0.022
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 52 TAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDE 88
T+ E E+E EEE+EEEEEE EG + EEE+E
Sbjct: 399 TSLKSEGEEEEEEEEEEEEEE-GEGEEEEEEGEEEEE 434
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 55.5 bits (132), Expect = 9e-09
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 11/89 (12%)
Query: 19 EKKEK----VEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDD 74
EK EK VEE+ + +EV EEEE A+EEE G+EE+ GEEE+ E EE+
Sbjct: 448 EKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEE------GKEEEGGEEEEAEGGEEET 501
Query: 75 EGPALKRAAEEEDEA-DPKRQKTENGASA 102
+ P + AA E EA P +++ ++ A A
Sbjct: 502 KSPPAEEAASPEKEAKSPVKEEAKSPAEA 530
Score = 43.5 bits (101), Expect = 4e-05
Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 18/117 (15%)
Query: 3 EKSVEAAAELSAKDLKEKKE------------KVEEKASRKERKKEVVEEEENGAEEEEE 50
EK E+ E ++ ++KK+ +V+E A KE+ + +E ++ +E
Sbjct: 883 EKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPS 942
Query: 51 ETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDE------ADPKRQKTENGAS 101
+ AE E E ++ EE+ ++ +E P + A+E+D+ + PK +K E +S
Sbjct: 943 KPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSS 999
Score = 42.7 bits (99), Expect = 6e-05
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 18 KEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGP 77
+E E+ E++A +E K+E EEE EEE + EE E+E + +E+ + P
Sbjct: 468 EEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSP 527
Query: 78 ALKRAAEEEDEADPKRQKTENGASA 102
A ++ E+E+ P K+ A +
Sbjct: 528 AEAKSPEKEEAKSPAEVKSPEKAKS 552
Score = 40.4 bits (93), Expect = 3e-04
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 11 ELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEE-----DEGEEE 65
E + LKE + E++ +KE K V+EEE E + +E + EEE + EE+
Sbjct: 797 EKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEK 856
Query: 66 DEEEEEEDDEGPALKRAAEEEDE---ADPKRQKTE 97
+ ++EE + A K EE+ E PK K E
Sbjct: 857 KDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVE 891
Score = 38.9 bits (89), Expect = 9e-04
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEED 60
+ EK A + ++ KKE+ E+K KK E+E A+ E +E A+ E+ +
Sbjct: 874 VEEKKEPAVEKPKESKVEAKKEEAEDK------KKVPTPEKEAPAKVEVKEDAKPKEKTE 927
Query: 61 EGEEEDEEEEEEDDEGPALKR--AAEEEDEADPKRQKTE 97
++E ++ + ++ PA K+ A E++D + K +K E
Sbjct: 928 VAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPE 966
Score = 38.5 bits (88), Expect = 0.001
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 30 RKERKKEVVEEEENGA---EEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRA--AE 84
+ E K +VVE+ E EE+ EET E +E E+E +EEE +++EG + A E
Sbjct: 439 KSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGE 498
Query: 85 EEDEADPKRQ 94
EE ++ P +
Sbjct: 499 EETKSPPAEE 508
Score = 38.5 bits (88), Expect = 0.001
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 7 EAAAELSAKDLKEKKEKVEEKA-SRKERKKEVVEEEENGAEEEEEETAEDG-EEEDEGEE 64
EA + AK ++ K V+E+A S E K V EE ++ AE + E A+ +EE + E
Sbjct: 591 EAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPE 650
Query: 65 EDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENGASA 102
+ + E+E+ + P ++ + + P++ K+ A A
Sbjct: 651 KAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEA 688
Score = 38.5 bits (88), Expect = 0.001
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEE-ENGAEEEEEETAEDGEEEDE 61
+K+ E A + K +EKK+ +E+A +KE K VEE+ E E+ +E E +EE E
Sbjct: 840 KKAEEEKAPATPKT-EEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAE 898
Query: 62 GEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTE 97
+++ E+ E PA E +++A PK +KTE
Sbjct: 899 DKKKVPTPEK---EAPA---KVEVKEDAKPK-EKTE 927
Score = 38.1 bits (87), Expect = 0.002
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKA--SRKERKKEVVEEEENGAEEEEEETAEDGEEE 59
S+K E ++EKKE EK S+ E KKE E+++ E+E A+ +E
Sbjct: 859 SKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKE 918
Query: 60 D-EGEEEDEEEEEEDDEGPALK--RAAEEEDEADPKRQKTENGA 100
D + +E+ E ++E D+ A + + AE+++ A K+ E A
Sbjct: 919 DAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKA 962
Score = 37.7 bits (86), Expect = 0.002
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDE 61
S + ++ + AK ++ K V+ +A E+ K V+EE E+ + E+ + ++
Sbjct: 662 SPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEK 721
Query: 62 GEEEDEEEEE--EDDEGPALKRAAEEEDEADPKRQKT 96
+ +EE + E + P + A E P++ KT
Sbjct: 722 AKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKT 758
Score = 37.7 bits (86), Expect = 0.002
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 15/108 (13%)
Query: 4 KSVEAAAELSAKDLKE------KKEKVEEKASRKERKKEV-VEEEENGAEEEEE------ 50
KS E A +D K KKE+V+ +E+ +EV V+E AEEE+
Sbjct: 794 KSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKT 853
Query: 51 ETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTEN 98
E +D ++E+ ++E + + E+ + PA+++ E + EA K+++ E+
Sbjct: 854 EEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEA--KKEEAED 899
Score = 37.4 bits (85), Expect = 0.003
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 3 EKSVEAAAELSAKDLKEKKEKVEEKA-SRKERKKEVVEEEENGAEEEEEETAED-GEEED 60
E++ AE +A KE K V+E+A S E K EE ++ AE + E A+ +EE
Sbjct: 499 EETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEA 558
Query: 61 EGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENGASA 102
+ E + E+E+ + PA ++ E+ P +++ ++ A A
Sbjct: 559 KSPPEAKSPEKEEAKSPAEVKSPEK--AKSPAKEEAKSPAEA 598
Score = 35.4 bits (80), Expect = 0.010
Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 7 EAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEE---EEETAEDGEEEDEGE 63
E A + K ++ K V+E+ E+ K ++E+ E+E +EE +EE++ +
Sbjct: 772 EEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQ 831
Query: 64 E---EDEEEEEEDDEGPALKRAAEEEDEADPKRQKTE 97
E ++ ++ E+++ PA + E++D + K E
Sbjct: 832 EVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKE 868
Score = 33.1 bits (74), Expect = 0.048
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
Query: 7 EAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENG-----AEEEEEETAEDGEEEDE 61
E E K+ KE++ K EE +E + E EEE A E+E +EE +
Sbjct: 468 EEVTEEEEKEAKEEEGKEEEGG--EEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAK 525
Query: 62 GEEEDEEEEEEDDEGPA-------LKRAAEEEDEADPKRQKTE 97
E + E+E+ + PA K A+EE ++ P+ + E
Sbjct: 526 SPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPE 568
Score = 33.1 bits (74), Expect = 0.048
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 19 EKKEKVEEKASRKERK----KEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDD 74
EKK+ EEKA + E K + E+++ ++E + AE E+ +++D + E+
Sbjct: 953 EKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKAT 1012
Query: 75 EGPALK 80
E A K
Sbjct: 1013 EDKAAK 1018
Score = 32.3 bits (72), Expect = 0.082
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENG---AEEEEEETAEDGEE 58
S + ++ + AK ++ K V+E+A E+ K V+EE A+ E+ D +
Sbjct: 704 SPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKS 763
Query: 59 EDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKT 96
+ EE D+ P ++ +E+ P++ K+
Sbjct: 764 PEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKS 801
Score = 31.6 bits (70), Expect = 0.14
Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 16/110 (14%)
Query: 7 EAAAELSAKDLKEKKEKVE---------------EKASRKERKKEVVEEEENGAEEEEEE 51
EA A++ K+ + KEK E + A +KE E + +E A++ EE+
Sbjct: 909 EAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEK 968
Query: 52 TAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENGAS 101
+ + +++ + +E + E A K ++ ++ ++ P + TE+ A+
Sbjct: 969 PKTEAKAKEDDKTLSKEPSKPKAE-KAEKSSSTDQKDSKPPEKATEDKAA 1017
Score = 29.3 bits (64), Expect = 0.70
Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 20/121 (16%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRK------------------ERKKEVVEEEEN 43
+++ ++ E + + +E K E K+ K E+ K V+EE
Sbjct: 554 AKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAK 613
Query: 44 GAEEEEEETAEDGEE--EDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQKTENGAS 101
E + E+ + E + E+ + +E+ + P ++ E+E+ P++ K+ A
Sbjct: 614 SPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAE 673
Query: 102 A 102
A
Sbjct: 674 A 674
Score = 28.1 bits (61), Expect = 1.6
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 3 EKSVEAAAELSAKDLKEKKE---KVEEKASRKERKKEVVE---EEENGAEEEEEETAEDG 56
EK + E+ + +E+K KV+E + E +K EE+ +++EE E
Sbjct: 811 EKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAP 870
Query: 57 EEEDEGEEEDEEEEEEDDEGPALKRAAEEE 86
+ + E ++E E+ ++ + A K AE++
Sbjct: 871 KPKVEEKKEPAVEKPKESKVEAKKEEAEDK 900
Score = 26.9 bits (58), Expect = 3.5
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 11/100 (11%)
Query: 7 EAAAELSAKDLKEKKEKVEEKASRKERKKEV-----------VEEEENGAEEEEEETAED 55
EA AK +++ K EKA E+ K + EE + A++ E+
Sbjct: 729 EAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSP 788
Query: 56 GEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPKRQK 95
+EE + E+ + +ED + P + +EE ++ K ++
Sbjct: 789 VKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEE 828
Score = 26.6 bits (57), Expect = 4.5
Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 2 SEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDE 61
S ++ + AK E K + K+ KE K E+ E+EE ++ E + +
Sbjct: 614 SPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKS--PEKAKSPEKEEAKSPEKAKSPVK 671
Query: 62 GEEEDEEEEEE----DDEGPALKRAAEEEDEADPKRQKT 96
E + E+ + + + P ++ +E+ P++ K+
Sbjct: 672 AEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKS 710
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.281 0.110 0.256
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,033,305
Number of Sequences: 37866
Number of extensions: 370758
Number of successful extensions: 45560
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2205
Number of HSP's successfully gapped in prelim test: 542
Number of HSP's that attempted gapping in prelim test: 2557
Number of HSP's gapped (non-prelim): 17900
length of query: 102
length of database: 18,247,518
effective HSP length: 73
effective length of query: 29
effective length of database: 15,483,300
effective search space: 449015700
effective search space used: 449015700
T: 11
A: 40
X1: 18 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 46 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.