LOXHD1 16251

Name: LOXHD1	Sequence: fasta or formatted (2211aa)		NCBI GI: 239050813
Description: lipoxygenase homology domains 1 isoform 1		Referenced in: Arachidonate, Prostaglandins, and Leukotrienes Auditory and Vestibular Functions
Other entries for this name: alt prot [1114aa] lipoxygenase homology domains 1 isoform 2 alt prot [512aa] lipoxygenase homology domains 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 97 2 C cysteine 1.5 33 1 D aspartate 7.6 168 2 E glutamate 8.7 192 8 F phenylalanine 4.7 105 2 G glycine 8.5 189 3 H histidine 1.5 34 1 I isoleucine 5.5 121 3 K lysine 7.1 158 4 L leucine 8.2 182 2 M methionine 1.8 39 2 N asparagine 4.9 108 2 P proline 2.7 59 1 Q glutamine 2.3 50 2 R arginine 6.3 140 3 S serine 5.2 115 4 T threonine 6.6 147 2 V valine 6.7 148 2 W tryptophan 2.2 49 1 Y tyrosine 3.5 77 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lipoxygenase homology domains 1 isoform 1 LOXHD1 0.454 lipoxygenase homology domains 1 isoform 2 LOXHD1 0.229 lipoxygenase homology domains 1 isoform 3 LOC100293597 0.023 PREDICTED: similar to hCG2036697 LOC100291435 0.023 PREDICTED: hypothetical protein XP_002347033 LOC100287651 0.023 PREDICTED: hypothetical protein XP_002342894 PKD1L3 0.012 PREDICTED: polycystic kidney disease 1-like 3 [Homo... PKD1L3 0.012 PREDICTED: polycystic kidney disease 1-like 3 [Homo... PKD1L3 0.012 PREDICTED: polycystin 1-like 3 PKD1L3 0.012 polycystin 1-like 3 PKD1L1 0.012 polycystin-1L1 PKD1 0.012 polycystin 1 isoform 2 precursor PKD1 0.012 polycystin 1 isoform 1 precursor PKD1L2 0.011 polycystin 1-like 2 isoform a PKDREJ 0.010 receptor for egg jelly-like protein precursor DENND5B 0.009 DENN/MADD domain containing 5B DENND5A 0.009 RAB6 interacting protein 1 WDR87 0.008 NYD-SP11 protein ALOX5 0.008 arachidonate 5-lipoxygenase LOC100294088 0.007 PREDICTED: hypothetical protein, partial MYT1 0.007 myelin transcription factor 1 PTMS 0.007 parathymosin CDC2L2 0.006 cell division cycle 2-like 2 isoform 4 CDC2L2 0.006 cell division cycle 2-like 2 isoform 1 CDC2L1 0.006 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.006 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.006 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.006 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.006 cell division cycle 2-like 1 (PITSLRE proteins) isof... RPGR 0.006 retinitis pigmentosa GTPase regulator isoform C [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.