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Search of human proteins with 46047467
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46047467 hypothetical protein LOC389084 [Homo sapiens]
(121 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46047467 hypothetical protein LOC389084 [Homo sapiens] 238 8e-64
gi|118498339 EMI domain containing 2 [Homo sapiens] 36 0.008
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 35 0.010
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 35 0.010
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 35 0.010
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 35 0.010
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 35 0.013
gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 34 0.030
gi|11386197 forkhead box E3 [Homo sapiens] 33 0.039
gi|39930511 collagen and calcium binding EGF domains 1 [Homo sap... 33 0.051
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 33 0.051
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 33 0.051
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 33 0.051
gi|33186895 selenoprotein V [Homo sapiens] 33 0.051
gi|157168329 formin 1 [Homo sapiens] 33 0.067
gi|153791535 general control of amino acid synthesis 5-like 2 [H... 33 0.067
gi|60498978 elastin microfibril interfacer 2 [Homo sapiens] 33 0.067
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 32 0.087
gi|150378549 tangerin [Homo sapiens] 32 0.087
gi|157388941 hypothetical protein LOC55071 [Homo sapiens] 32 0.087
gi|116734689 socius isoform 3 [Homo sapiens] 32 0.11
gi|116734681 socius isoform 1 [Homo sapiens] 32 0.11
gi|116734679 socius isoform 2 [Homo sapiens] 32 0.11
gi|150418009 transforming, acidic coiled-coil containing protein... 32 0.11
gi|45827755 transforming, acidic coiled-coil containing protein ... 32 0.11
gi|45827753 transforming, acidic coiled-coil containing protein ... 32 0.11
gi|11119414 transforming, acidic coiled-coil containing protein ... 32 0.11
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 32 0.11
gi|38348382 spermatogenesis associated 21 [Homo sapiens] 32 0.11
gi|197245373 proline rich 22 isoform 1 [Homo sapiens] 32 0.15
>gi|46047467 hypothetical protein LOC389084 [Homo sapiens]
Length = 121
Score = 238 bits (607), Expect = 8e-64
Identities = 121/121 (100%), Positives = 121/121 (100%)
Query: 1 MASCLALRMALLLVSGVLAPAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVD 60
MASCLALRMALLLVSGVLAPAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVD
Sbjct: 1 MASCLALRMALLLVSGVLAPAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVD 60
Query: 61 TGPPAPTVAPGPEDSTAQERLDQGGGSLGPGAIAAIVIAALLATCVVLALVVVALRKFSA 120
TGPPAPTVAPGPEDSTAQERLDQGGGSLGPGAIAAIVIAALLATCVVLALVVVALRKFSA
Sbjct: 61 TGPPAPTVAPGPEDSTAQERLDQGGGSLGPGAIAAIVIAALLATCVVLALVVVALRKFSA 120
Query: 121 S 121
S
Sbjct: 121 S 121
>gi|118498339 EMI domain containing 2 [Homo sapiens]
Length = 439
Score = 35.8 bits (81), Expect = 0.008
Identities = 32/95 (33%), Positives = 40/95 (42%), Gaps = 12/95 (12%)
Query: 7 LRMALLLVSGVLAPAVLTDDVPQ-EPVPTLWNE---PAELPSGEGPV----ESTSPGREP 58
L +LL+ P+ +D+P E P WNE P +P PV T P P
Sbjct: 144 LEAKVLLLEAAERPSSPDNDLPAPESTPPTWNEDFLPDAIPLAH-PVPRQRRPTGPAGPP 202
Query: 59 VDTGPPAPTVAPGPEDSTAQ--ERLDQG-GGSLGP 90
TGPP P PG + Q E+ G G LGP
Sbjct: 203 GQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGP 237
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 54 PGREPVDTGPPAPTVAPGPEDSTAQERLDQGGGSLGP 90
P P GPP P PGP + + L G++GP
Sbjct: 304 PRGPPGPPGPPGPRGPPGPPGTPGSQGLAGERGTVGP 340
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 35.4 bits (80), Expect = 0.010
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTAQE 79
P+EP PT EPA + P T+P +EP T P PAPT P +T +E
Sbjct: 275 PKEPAPTTTKEPAPTTTKSAP---TTP-KEPAPTTPKKPAPTTPKEPAPTTPKE 324
Score = 35.4 bits (80), Expect = 0.010
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTAQE 79
P+EP PT EPA P+ + P +T +EP T P PAPT P +T +E
Sbjct: 322 PKEPTPTTPKEPA--PTTKEPAPTTP--KEPAPTAPKKPAPTTPKEPAPTTPKE 371
Score = 34.7 bits (78), Expect = 0.018
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 20 PAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTA 77
P L P+EP PT EPA P+ +P +EP T P PAPT P +T
Sbjct: 511 PEELAPTTPEEPTPTTPEEPA--PTTPKAAAPNTP-KEPAPTTPKEPAPTTPKEPAPTTP 567
Query: 78 QE 79
+E
Sbjct: 568 KE 569
Score = 33.1 bits (74), Expect = 0.051
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 20 PAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPG----REPVDTGP--PAPTVAPGPE 73
P T P+EP PT P P P +EP T P PAPT P
Sbjct: 322 PKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPS 381
Query: 74 DSTAQE 79
+T +E
Sbjct: 382 PTTPKE 387
Score = 32.0 bits (71), Expect = 0.11
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTAQE 79
P+EP PT EP P E +EP T P PAPT P +T +E
Sbjct: 314 PKEPAPTTPKEPTPTT----PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKE 363
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 12/60 (20%)
Query: 28 PQEPVPTLWNEPA-ELPSGEGPVESTSPGREPVDTGPP-------APTVAPGPEDSTAQE 79
P+EP PT EPA P G P +EP T P APT GP +T+ +
Sbjct: 628 PKEPAPTTPKEPAPTTPKGTAPTTL----KEPAPTTPKKPAPKELAPTTTKGPTSTTSDK 683
Score = 29.3 bits (64), Expect = 0.74
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 19 APAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQ 78
AP P+EP PT EPA P+ T+P T APT P +T +
Sbjct: 352 APKKPAPTTPKEPAPTTPKEPA--PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 409
Score = 29.3 bits (64), Expect = 0.74
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 8/69 (11%)
Query: 19 APAVLTDDVP---QEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP-----PAPTVAP 70
AP + P +EP PT EPA + P + P + P P+PT
Sbjct: 365 APTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 424
Query: 71 GPEDSTAQE 79
P +T +E
Sbjct: 425 EPAPTTPKE 433
Score = 28.9 bits (63), Expect = 0.97
Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQ 78
P+EP PT P P + P P PAPT P +T +
Sbjct: 244 PKEPAPTTTKSAPTTPKEPAPTTTKEPA--PTTPKEPAPTTTKEPAPTTTK 292
Score = 28.5 bits (62), Expect = 1.3
Identities = 18/65 (27%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Query: 20 PAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP-----PAPTVAPGPED 74
P T P+EP T EP P P + P PAPT P
Sbjct: 213 PKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 272
Query: 75 STAQE 79
+T +E
Sbjct: 273 TTPKE 277
Score = 26.9 bits (58), Expect = 3.7
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 17/52 (32%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQE 79
P+EP PT EPA P T PAPT P +T +E
Sbjct: 447 PKEPAPTTPKEPA-----------------PTTTKKPAPTTPKEPAPTTPKE 481
Score = 26.2 bits (56), Expect = 6.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 29 QEPVPTLWNEPA--ELP--SGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQE 79
+EP PT +PA EL + +GP +TS P APT P +T ++
Sbjct: 653 KEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKK 707
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 35.4 bits (80), Expect = 0.010
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTAQE 79
P+EP PT EPA + P T+P +EP T P PAPT P +T +E
Sbjct: 316 PKEPAPTTTKEPAPTTTKSAP---TTP-KEPAPTTPKKPAPTTPKEPAPTTPKE 365
Score = 35.4 bits (80), Expect = 0.010
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTAQE 79
P+EP PT EPA P+ + P +T +EP T P PAPT P +T +E
Sbjct: 363 PKEPTPTTPKEPA--PTTKEPAPTTP--KEPAPTAPKKPAPTTPKEPAPTTPKE 412
Score = 34.7 bits (78), Expect = 0.018
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 20 PAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTA 77
P L P+EP PT EPA P+ +P +EP T P PAPT P +T
Sbjct: 552 PEELAPTTPEEPTPTTPEEPA--PTTPKAAAPNTP-KEPAPTTPKEPAPTTPKEPAPTTP 608
Query: 78 QE 79
+E
Sbjct: 609 KE 610
Score = 33.1 bits (74), Expect = 0.051
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 20 PAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPG----REPVDTGP--PAPTVAPGPE 73
P T P+EP PT P P P +EP T P PAPT P
Sbjct: 363 PKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPS 422
Query: 74 DSTAQE 79
+T +E
Sbjct: 423 PTTPKE 428
Score = 32.0 bits (71), Expect = 0.11
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTAQE 79
P+EP PT EP P E +EP T P PAPT P +T +E
Sbjct: 355 PKEPAPTTPKEPTPTT----PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKE 404
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 12/60 (20%)
Query: 28 PQEPVPTLWNEPA-ELPSGEGPVESTSPGREPVDTGPP-------APTVAPGPEDSTAQE 79
P+EP PT EPA P G P +EP T P APT GP +T+ +
Sbjct: 669 PKEPAPTTPKEPAPTTPKGTAPTTL----KEPAPTTPKKPAPKELAPTTTKGPTSTTSDK 724
Score = 29.3 bits (64), Expect = 0.74
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 19 APAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQ 78
AP P+EP PT EPA P+ T+P T APT P +T +
Sbjct: 393 APKKPAPTTPKEPAPTTPKEPA--PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 450
Score = 29.3 bits (64), Expect = 0.74
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 8/69 (11%)
Query: 19 APAVLTDDVP---QEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP-----PAPTVAP 70
AP + P +EP PT EPA + P + P + P P+PT
Sbjct: 406 APTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 465
Query: 71 GPEDSTAQE 79
P +T +E
Sbjct: 466 EPAPTTPKE 474
Score = 28.9 bits (63), Expect = 0.97
Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQ 78
P+EP PT P P + P P PAPT P +T +
Sbjct: 285 PKEPAPTTTKSAPTTPKEPAPTTTKEPA--PTTPKEPAPTTTKEPAPTTTK 333
Score = 28.5 bits (62), Expect = 1.3
Identities = 18/65 (27%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Query: 20 PAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP-----PAPTVAPGPED 74
P T P+EP T EP P P + P PAPT P
Sbjct: 254 PKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 313
Query: 75 STAQE 79
+T +E
Sbjct: 314 TTPKE 318
Score = 26.9 bits (58), Expect = 3.7
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 17/52 (32%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQE 79
P+EP PT EPA P T PAPT P +T +E
Sbjct: 488 PKEPAPTTPKEPA-----------------PTTTKKPAPTTPKEPAPTTPKE 522
Score = 26.2 bits (56), Expect = 6.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 29 QEPVPTLWNEPA--ELP--SGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQE 79
+EP PT +PA EL + +GP +TS P APT P +T ++
Sbjct: 694 KEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKK 748
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 35.4 bits (80), Expect = 0.010
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTAQE 79
P+EP PT EPA + P T+P +EP T P PAPT P +T +E
Sbjct: 368 PKEPAPTTTKEPAPTTTKSAP---TTP-KEPAPTTPKKPAPTTPKEPAPTTPKE 417
Score = 35.4 bits (80), Expect = 0.010
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTAQE 79
P+EP PT EPA P+ + P +T +EP T P PAPT P +T +E
Sbjct: 415 PKEPTPTTPKEPA--PTTKEPAPTTP--KEPAPTAPKKPAPTTPKEPAPTTPKE 464
Score = 34.7 bits (78), Expect = 0.018
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 20 PAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTA 77
P L P+EP PT EPA P+ +P +EP T P PAPT P +T
Sbjct: 604 PEELAPTTPEEPTPTTPEEPA--PTTPKAAAPNTP-KEPAPTTPKEPAPTTPKEPAPTTP 660
Query: 78 QE 79
+E
Sbjct: 661 KE 662
Score = 33.1 bits (74), Expect = 0.051
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 20 PAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPG----REPVDTGP--PAPTVAPGPE 73
P T P+EP PT P P P +EP T P PAPT P
Sbjct: 415 PKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPS 474
Query: 74 DSTAQE 79
+T +E
Sbjct: 475 PTTPKE 480
Score = 32.0 bits (71), Expect = 0.11
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTAQE 79
P+EP PT EP P E +EP T P PAPT P +T +E
Sbjct: 407 PKEPAPTTPKEPTPTT----PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKE 456
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 12/60 (20%)
Query: 28 PQEPVPTLWNEPA-ELPSGEGPVESTSPGREPVDTGPP-------APTVAPGPEDSTAQE 79
P+EP PT EPA P G P +EP T P APT GP +T+ +
Sbjct: 721 PKEPAPTTPKEPAPTTPKGTAPTTL----KEPAPTTPKKPAPKELAPTTTKGPTSTTSDK 776
Score = 29.3 bits (64), Expect = 0.74
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 19 APAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQ 78
AP P+EP PT EPA P+ T+P T APT P +T +
Sbjct: 445 APKKPAPTTPKEPAPTTPKEPA--PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 502
Score = 29.3 bits (64), Expect = 0.74
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 8/69 (11%)
Query: 19 APAVLTDDVP---QEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP-----PAPTVAP 70
AP + P +EP PT EPA + P + P + P P+PT
Sbjct: 458 APTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 517
Query: 71 GPEDSTAQE 79
P +T +E
Sbjct: 518 EPAPTTPKE 526
Score = 28.9 bits (63), Expect = 0.97
Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQ 78
P+EP PT P P + P P PAPT P +T +
Sbjct: 337 PKEPAPTTTKSAPTTPKEPAPTTTKEPA--PTTPKEPAPTTTKEPAPTTTK 385
Score = 28.5 bits (62), Expect = 1.3
Identities = 18/65 (27%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Query: 20 PAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP-----PAPTVAPGPED 74
P T P+EP T EP P P + P PAPT P
Sbjct: 306 PKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 365
Query: 75 STAQE 79
+T +E
Sbjct: 366 TTPKE 370
Score = 26.9 bits (58), Expect = 3.7
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 17/52 (32%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQE 79
P+EP PT EPA P T PAPT P +T +E
Sbjct: 540 PKEPAPTTPKEPA-----------------PTTTKKPAPTTPKEPAPTTPKE 574
Score = 26.2 bits (56), Expect = 6.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 29 QEPVPTLWNEPA--ELP--SGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQE 79
+EP PT +PA EL + +GP +TS P APT P +T ++
Sbjct: 746 KEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKK 800
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 35.4 bits (80), Expect = 0.010
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTAQE 79
P+EP PT EPA + P T+P +EP T P PAPT P +T +E
Sbjct: 409 PKEPAPTTTKEPAPTTTKSAP---TTP-KEPAPTTPKKPAPTTPKEPAPTTPKE 458
Score = 35.4 bits (80), Expect = 0.010
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTAQE 79
P+EP PT EPA P+ + P +T +EP T P PAPT P +T +E
Sbjct: 456 PKEPTPTTPKEPA--PTTKEPAPTTP--KEPAPTAPKKPAPTTPKEPAPTTPKE 505
Score = 34.7 bits (78), Expect = 0.018
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 20 PAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTA 77
P L P+EP PT EPA P+ +P +EP T P PAPT P +T
Sbjct: 645 PEELAPTTPEEPTPTTPEEPA--PTTPKAAAPNTP-KEPAPTTPKEPAPTTPKEPAPTTP 701
Query: 78 QE 79
+E
Sbjct: 702 KE 703
Score = 33.1 bits (74), Expect = 0.051
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 20 PAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPG----REPVDTGP--PAPTVAPGPE 73
P T P+EP PT P P P +EP T P PAPT P
Sbjct: 456 PKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPS 515
Query: 74 DSTAQE 79
+T +E
Sbjct: 516 PTTPKE 521
Score = 32.0 bits (71), Expect = 0.11
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP--PAPTVAPGPEDSTAQE 79
P+EP PT EP P E +EP T P PAPT P +T +E
Sbjct: 448 PKEPAPTTPKEPTPTT----PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKE 497
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 12/60 (20%)
Query: 28 PQEPVPTLWNEPA-ELPSGEGPVESTSPGREPVDTGPP-------APTVAPGPEDSTAQE 79
P+EP PT EPA P G P +EP T P APT GP +T+ +
Sbjct: 762 PKEPAPTTPKEPAPTTPKGTAPTTL----KEPAPTTPKKPAPKELAPTTTKGPTSTTSDK 817
Score = 29.3 bits (64), Expect = 0.74
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 19 APAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQ 78
AP P+EP PT EPA P+ T+P T APT P +T +
Sbjct: 486 APKKPAPTTPKEPAPTTPKEPA--PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 543
Score = 29.3 bits (64), Expect = 0.74
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 8/69 (11%)
Query: 19 APAVLTDDVP---QEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP-----PAPTVAP 70
AP + P +EP PT EPA + P + P + P P+PT
Sbjct: 499 APTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 558
Query: 71 GPEDSTAQE 79
P +T +E
Sbjct: 559 EPAPTTPKE 567
Score = 28.9 bits (63), Expect = 0.97
Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQ 78
P+EP PT P P + P P PAPT P +T +
Sbjct: 378 PKEPAPTTTKSAPTTPKEPAPTTTKEPA--PTTPKEPAPTTTKEPAPTTTK 426
Score = 28.5 bits (62), Expect = 1.3
Identities = 18/65 (27%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Query: 20 PAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP-----PAPTVAPGPED 74
P T P+EP T EP P P + P PAPT P
Sbjct: 347 PKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 406
Query: 75 STAQE 79
+T +E
Sbjct: 407 TTPKE 411
Score = 26.9 bits (58), Expect = 3.7
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 17/52 (32%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQE 79
P+EP PT EPA P T PAPT P +T +E
Sbjct: 581 PKEPAPTTPKEPA-----------------PTTTKKPAPTTPKEPAPTTPKE 615
Score = 26.2 bits (56), Expect = 6.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 29 QEPVPTLWNEPA--ELP--SGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQE 79
+EP PT +PA EL + +GP +TS P APT P +T ++
Sbjct: 787 KEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKK 841
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 35.0 bits (79), Expect = 0.013
Identities = 19/56 (33%), Positives = 24/56 (42%)
Query: 39 PAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQERLDQGGGSLGPGAIA 94
PA G+GP T P P + GPP P G + S + G+ GP IA
Sbjct: 900 PAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIA 955
Score = 25.8 bits (55), Expect = 8.2
Identities = 15/49 (30%), Positives = 20/49 (40%)
Query: 46 EGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQERLDQGGGSLGPGAIA 94
+GP S P + GPP P A GP + + G+ G IA
Sbjct: 358 QGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIA 406
>gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 1006
Score = 33.9 bits (76), Expect = 0.030
Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 24 TDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGP---PAPTVAPGPEDSTAQER 80
++D P T +P PS E P SPG P T P PAP A P DS A +R
Sbjct: 306 SEDCPPFRAGTPPQQPTA-PSSEWPGPQRSPGTGPRWTAPLPRPAPLPAKRPGDSPASKR 364
Query: 81 LDQGGGS 87
GG S
Sbjct: 365 PRPGGVS 371
>gi|11386197 forkhead box E3 [Homo sapiens]
Length = 319
Score = 33.5 bits (75), Expect = 0.039
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 39 PAELPSGE--GPVESTSPGREPVDT----GPPAPTVAPGP 72
PA PSG P+ PGREP + G APT APGP
Sbjct: 20 PAVAPSGPPPSPLAGAEPGREPEEAAAGRGEAAPTPAPGP 59
>gi|39930511 collagen and calcium binding EGF domains 1 [Homo
sapiens]
Length = 406
Score = 33.1 bits (74), Expect = 0.051
Identities = 16/37 (43%), Positives = 17/37 (45%)
Query: 39 PAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDS 75
P LP G+GP S P P G P P PGP S
Sbjct: 248 PPGLPGGQGPPGSPGPKGSPGFPGMPGPPGQPGPRGS 284
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein
[Homo sapiens]
Length = 1650
Score = 33.1 bits (74), Expect = 0.051
Identities = 28/96 (29%), Positives = 34/96 (35%), Gaps = 2/96 (2%)
Query: 17 VLAPAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDST 76
VL P +L + P P P + GPV P G P APGP ++
Sbjct: 304 VLEPGMLVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTS 363
Query: 77 AQ--ERLDQGGGSLGPGAIAAIVIAALLATCVVLAL 110
R GGG GP A A + LAL
Sbjct: 364 LMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLAL 399
Score = 30.0 bits (66), Expect = 0.43
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 48 PVESTSPGREPVDTGPPAPTVAPGPEDSTAQERLDQGGGSLG-PGAIAA 95
P + SPG + GPP P GP S E G G+ G PGAI A
Sbjct: 1213 PGQPGSPGPTG-ENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGA 1260
Score = 27.7 bits (60), Expect = 2.2
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Query: 43 PSGE-GPVESTSPGREPVDTGPPAPTVAPGPEDSTAQERLDQGGGSLGP 90
PSGE G P P GPP P GP + + G G+LGP
Sbjct: 1077 PSGEKGETGDVGPMGPP---GPPGPRGPAGPNGADGPQGPPGGVGNLGP 1122
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein
[Homo sapiens]
Length = 1629
Score = 33.1 bits (74), Expect = 0.051
Identities = 28/96 (29%), Positives = 34/96 (35%), Gaps = 2/96 (2%)
Query: 17 VLAPAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDST 76
VL P +L + P P P + GPV P G P APGP ++
Sbjct: 283 VLEPGMLVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTS 342
Query: 77 AQ--ERLDQGGGSLGPGAIAAIVIAALLATCVVLAL 110
R GGG GP A A + LAL
Sbjct: 343 LMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLAL 378
Score = 30.0 bits (66), Expect = 0.43
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 48 PVESTSPGREPVDTGPPAPTVAPGPEDSTAQERLDQGGGSLG-PGAIAA 95
P + SPG + GPP P GP S E G G+ G PGAI A
Sbjct: 1192 PGQPGSPGPTG-ENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGA 1239
Score = 27.7 bits (60), Expect = 2.2
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Query: 43 PSGE-GPVESTSPGREPVDTGPPAPTVAPGPEDSTAQERLDQGGGSLGP 90
PSGE G P P GPP P GP + + G G+LGP
Sbjct: 1056 PSGEKGETGDVGPMGPP---GPPGPRGPAGPNGADGPQGPPGGVGNLGP 1101
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein
[Homo sapiens]
Length = 1736
Score = 33.1 bits (74), Expect = 0.051
Identities = 28/96 (29%), Positives = 34/96 (35%), Gaps = 2/96 (2%)
Query: 17 VLAPAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDST 76
VL P +L + P P P + GPV P G P APGP ++
Sbjct: 390 VLEPGMLVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTS 449
Query: 77 AQ--ERLDQGGGSLGPGAIAAIVIAALLATCVVLAL 110
R GGG GP A A + LAL
Sbjct: 450 LMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLAL 485
Score = 30.0 bits (66), Expect = 0.43
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 48 PVESTSPGREPVDTGPPAPTVAPGPEDSTAQERLDQGGGSLG-PGAIAA 95
P + SPG + GPP P GP S E G G+ G PGAI A
Sbjct: 1299 PGQPGSPGPTG-ENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGA 1346
Score = 27.7 bits (60), Expect = 2.2
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Query: 43 PSGE-GPVESTSPGREPVDTGPPAPTVAPGPEDSTAQERLDQGGGSLGP 90
PSGE G P P GPP P GP + + G G+LGP
Sbjct: 1163 PSGEKGETGDVGPMGPP---GPPGPRGPAGPNGADGPQGPPGGVGNLGP 1208
>gi|33186895 selenoprotein V [Homo sapiens]
Length = 346
Score = 33.1 bits (74), Expect = 0.051
Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 14/75 (18%)
Query: 7 LRMALLLVSGVLAPAVLTDDVPQEPVPTLWNEPAELP-------------SGEGPVESTS 53
+R AL ++ LAPA L D P EP P L P E P S GP
Sbjct: 134 IRAALPVLDSYLAPA-LPLDPPPEPAPELPLLPEEDPEPAPSLKLIPSVSSEAGPAPGPL 192
Query: 54 PGREPVDTGPPAPTV 68
P R P+ P PT+
Sbjct: 193 PTRTPLAANSPGPTL 207
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 32.7 bits (73), Expect = 0.067
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 31 PVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGP 72
P P P LPSG G + S +P PV GPP P P P
Sbjct: 647 PPPASIPPPPPLPSGLGSL-SPAPPMPPVSAGPPLPPPPPPP 687
Score = 26.6 bits (57), Expect = 4.8
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 18 LAPAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTA 77
L P P P P L N PA G P PG P PP P + G S++
Sbjct: 690 LPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAP----PPPPGLFFGLGSSSS 745
Query: 78 Q 78
Q
Sbjct: 746 Q 746
>gi|153791535 general control of amino acid synthesis 5-like 2
[Homo sapiens]
Length = 837
Score = 32.7 bits (73), Expect = 0.067
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 31 PVPTLWNEPAELPS-GEGPVESTSPGREPVDTGPPAPTVAP--GPEDSTAQERLDQGGGS 87
P P P + P+ P + SP P+ T PAP AP P ST G G
Sbjct: 10 PAPAAQPRPLQSPAPAPTPTPAPSPASAPIPTPTPAPAPAPAAAPAGSTGTGGPGVGSGG 69
Query: 88 LGPG 91
G G
Sbjct: 70 AGSG 73
Score = 25.8 bits (55), Expect = 8.2
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 38 EPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTA 77
EP++ P+ P + P P+ + PAPT P P ++A
Sbjct: 3 EPSQAPT---PAPAAQP--RPLQSPAPAPTPTPAPSPASA 37
>gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
Length = 1053
Score = 32.7 bits (73), Expect = 0.067
Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 10/72 (13%)
Query: 26 DVPQEPVPTLWNEPAELPSGEGPVESTSPGREPV------DTGPPAPTVAPGPEDSTAQE 79
+ P+EP L EPA P GP + PGR PV + PP P + G T Q
Sbjct: 796 EAPKEP---LQPEPAP-PRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQA 851
Query: 80 RLDQGGGSLGPG 91
G G G G
Sbjct: 852 GPPAGAGVSGRG 863
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 32.3 bits (72), Expect = 0.087
Identities = 25/74 (33%), Positives = 29/74 (39%), Gaps = 9/74 (12%)
Query: 15 SGVLAPAVLTDDVP--QEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGP 72
SG P + P PVP EP ELP+ GP+ P PV P P P P
Sbjct: 804 SGATPPPIAPTGPPTASPPVPAK-EEPEELPAAPGPLPPPPPPPPPV----PGPVTLPPP 858
Query: 73 EDSTAQERLDQGGG 86
+ E GGG
Sbjct: 859 Q--LVPEGTPGGGG 870
Score = 29.6 bits (65), Expect = 0.57
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
Query: 1 MASCLAL---RMALLLVSGVLAPAVLTDDVPQEPVPTL---WNEPAELPS-GEGPVESTS 53
+ +C AL R+ L G P P+ P P ++ P +PS G P
Sbjct: 624 LVTCAALTHPRVPPLQPMGPTCPTPAPVPPPEAPSPFRAPPFHPPGPMPSVGSMPSAGPM 683
Query: 54 PGREPVDTGPPAPTVAPGP 72
P P+ + P P+ PGP
Sbjct: 684 PSAGPMPSAGPVPSARPGP 702
>gi|150378549 tangerin [Homo sapiens]
Length = 1523
Score = 32.3 bits (72), Expect = 0.087
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query: 28 PQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQ----ERLDQ 83
P + TL E E G+G + + PAP AP P T++ ER ++
Sbjct: 213 PSRELKTLCEEEEE---GQGRPQQAVASPSNAEDTSPAPVSAPAPPARTSRGQGSERANE 269
Query: 84 GGGSLGPGA 92
GG +GP A
Sbjct: 270 AGGQVGPEA 278
>gi|157388941 hypothetical protein LOC55071 [Homo sapiens]
Length = 194
Score = 32.3 bits (72), Expect = 0.087
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 43 PSGEGPVESTSPGREPVDTGPPAPTVAPGPEDSTAQERLDQGGGSLGPG 91
PSG+ E G E D P P V PGP + RL GGG G G
Sbjct: 82 PSGQ---EREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAG 127
>gi|116734689 socius isoform 3 [Homo sapiens]
Length = 400
Score = 32.0 bits (71), Expect = 0.11
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 12 LLVSGVLAPAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPG 71
L +G++ A L + P +L P P G GP S PG P P P+ PG
Sbjct: 336 LQAAGLVPKAALLLRARRAPKSSLKFSPGPCP-GPGPGPSPGPGPGPSPGPGPGPSPCPG 394
Query: 72 PEDS 75
P S
Sbjct: 395 PSPS 398
>gi|116734681 socius isoform 1 [Homo sapiens]
Length = 487
Score = 32.0 bits (71), Expect = 0.11
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 12 LLVSGVLAPAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPG 71
L +G++ A L + P +L P P G GP S PG P P P+ PG
Sbjct: 423 LQAAGLVPKAALLLRARRAPKSSLKFSPGPCP-GPGPGPSPGPGPGPSPGPGPGPSPCPG 481
Query: 72 PEDS 75
P S
Sbjct: 482 PSPS 485
>gi|116734679 socius isoform 2 [Homo sapiens]
Length = 520
Score = 32.0 bits (71), Expect = 0.11
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 12 LLVSGVLAPAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPAPTVAPG 71
L +G++ A L + P +L P P G GP S PG P P P+ PG
Sbjct: 456 LQAAGLVPKAALLLRARRAPKSSLKFSPGPCP-GPGPGPSPGPGPGPSPGPGPGPSPCPG 514
Query: 72 PEDS 75
P S
Sbjct: 515 PSPS 518
>gi|150418009 transforming, acidic coiled-coil containing protein 2
isoform a [Homo sapiens]
Length = 2948
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 50 ESTSPGREPVDTGPPAPTVAPGPEDSTAQERLDQGGGS 87
EST+P + P PP P V P PE ST + G GS
Sbjct: 1957 ESTTPVKAPPAPPPPPPEVIPEPEVSTQPPPEEPGCGS 1994
Score = 26.6 bits (57), Expect = 4.8
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 43 PSGE-GP---VESTSPGREPVDTGPPAPT--VAPGPEDSTAQERLDQGGGSLGPGAIAAI 96
P GE GP + PG P T P+P V PE ++ LD GG PG A I
Sbjct: 1609 PHGEDGPGDFAHTGVPGHVPRSTCAPSPQREVLTVPEANSEPWTLDTLGGERRPGVTAGI 1668
Query: 97 V 97
+
Sbjct: 1669 L 1669
>gi|45827755 transforming, acidic coiled-coil containing protein 2
isoform b [Homo sapiens]
Length = 1094
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 50 ESTSPGREPVDTGPPAPTVAPGPEDSTAQERLDQGGGS 87
EST+P + P PP P V P PE ST + G GS
Sbjct: 103 ESTTPVKAPPAPPPPPPEVIPEPEVSTQPPPEEPGCGS 140
>gi|45827753 transforming, acidic coiled-coil containing protein 2
isoform c [Homo sapiens]
Length = 996
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 50 ESTSPGREPVDTGPPAPTVAPGPEDSTAQERLDQGGGS 87
EST+P + P PP P V P PE ST + G GS
Sbjct: 35 ESTTPVKAPPAPPPPPPEVIPEPEVSTQPPPEEPGCGS 72
>gi|11119414 transforming, acidic coiled-coil containing protein 2
isoform d [Homo sapiens]
Length = 1026
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 50 ESTSPGREPVDTGPPAPTVAPGPEDSTAQERLDQGGGS 87
EST+P + P PP P V P PE ST + G GS
Sbjct: 35 ESTTPVKAPPAPPPPPPEVIPEPEVSTQPPPEEPGCGS 72
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 32.0 bits (71), Expect = 0.11
Identities = 29/85 (34%), Positives = 33/85 (38%), Gaps = 11/85 (12%)
Query: 20 PAVLTDDVPQEPVPTLWNEPAELPSGEGPVESTSPGREPVDTGPPA--PTVA-------P 70
P + P PVP + + LP +GP E PG P A PT A P
Sbjct: 770 PEGASSAAPGSPVPAPPTKASALPVEQGPAEPIPPGVASGGLRPDALGPTTAHHGPRHPP 829
Query: 71 GPEDSTAQERLDQGGGSLGPGAIAA 95
P S A ER G GPGA A
Sbjct: 830 KPPRSKATER--PGQEPEGPGATPA 852
>gi|38348382 spermatogenesis associated 21 [Homo sapiens]
Length = 469
Score = 32.0 bits (71), Expect = 0.11
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 19 APAVLTDDVPQEPVPTLWNEPAELP-SGEGPVESTSPGREPVDTGPPAPTVAPGP 72
+P LT VP P+L PA +P SG +PG EP G P PT P P
Sbjct: 113 SPRTLTP-VPTS-APSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCP 165
>gi|197245373 proline rich 22 isoform 1 [Homo sapiens]
Length = 422
Score = 31.6 bits (70), Expect = 0.15
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 23 LTDDVPQEPVPTLWNEPAELPSGE---GPVESTSPGREPVDTGPPAPTVAPGPED 74
L ++ P P P N PA + SG+ + PGR+ PA PGP +
Sbjct: 361 LDEEQPPHPGPPATNTPAPILSGKRKASTAKKGKPGRKARQPAGPASATPPGPRE 415
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.133 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,068,502
Number of Sequences: 37866
Number of extensions: 404150
Number of successful extensions: 4065
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 348
Number of HSP's that attempted gapping in prelim test: 2772
Number of HSP's gapped (non-prelim): 1559
length of query: 121
length of database: 18,247,518
effective HSP length: 89
effective length of query: 32
effective length of database: 14,877,444
effective search space: 476078208
effective search space used: 476078208
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.