Guide to the Human Genome
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Name: UNQ830 Sequence: fasta or formatted (121aa) NCBI GI: 46047467
Description:

hypothetical protein LOC389084

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.9         18           2
 C cysteine            1.7          2           1
 D aspartate           4.1          5           2
 E glutamate           6.6          8           1
 F phenylalanine       0.8          1           1
 G glycine             9.1         11           3
 H histidine           0.0          0           0
 I isoleucine          2.5          3           1
 K lysine              0.8          1           1
 L leucine            13.2         16           3
 M methionine          1.7          2           1
 N asparagine          0.8          1           1
 P proline            12.4         15           2
 Q glutamine           2.5          3           1
 R arginine            3.3          4           1
 S serine              7.4          9           1
 T threonine           5.8          7           1
 V valine             11.6         14           3
 W tryptophan          0.8          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC389084 
EMID2                 0.052   EMI domain containing 2 
PRG4                  0.047   proteoglycan 4 isoform D 
PRG4                  0.047   proteoglycan 4 isoform C 
PRG4                  0.047   proteoglycan 4 isoform B 
PRG4                  0.047   proteoglycan 4 isoform A 
COL1A1                0.047   alpha 1 type I collagen preproprotein 
ANKRD33B              0.042   PREDICTED: ankyrin repeat domain 33B 
FOXE3                 0.038   forkhead box E3 
CCBE1                 0.038   collagen and calcium binding EGF domains 1 
COL11A2               0.038   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.038   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.038   collagen, type XI, alpha 2 isoform 1 preproprotein ...
SELV                  0.038   selenoprotein V 
FMN1                  0.038   formin 1 
KAT2A                 0.038   general control of amino acid synthesis 5-like 2 [H...
EMILIN2               0.038   elastin microfibril interfacer 2 
PELP1                 0.033   proline, glutamic acid and leucine rich protein 1 [...
EHBP1L1               0.033   tangerin 
C9orf40               0.033   hypothetical protein LOC55071 
UBXN11                0.033   socius isoform 3 
UBXN11                0.033   socius isoform 1 
UBXN11                0.033   socius isoform 2 
TACC2                 0.033   transforming, acidic coiled-coil containing protein...
TACC2                 0.033   transforming, acidic coiled-coil containing protein ...
TACC2                 0.033   transforming, acidic coiled-coil containing protein ...
TACC2                 0.033   transforming, acidic coiled-coil containing protein ...
KNDC1                 0.033   kinase non-catalytic C-lobe domain (KIND) containin...
SPATA21               0.033   spermatogenesis associated 21 
PRR22                 0.033   proline rich 22 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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