Guide to the Human Genome
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Name: TACC2 Sequence: fasta or formatted (996aa) NCBI GI: 45827753
Description:

transforming, acidic coiled-coil containing protein 2 isoform c

Referenced in:

Coiled-Coil Proteins

Other entries for this name:
alt prot [1026aa] transforming, acidic coiled-coil containing protein 2 isoform d
alt prot [2948aa] transforming, acidic coiled-coil containing protein 2 isoform a
alt prot [1094aa] transforming, acidic coiled-coil containing protein 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         85           2
 C cysteine            0.8          8           1
 D aspartate           5.9         59           3
 E glutamate          10.6        106           2
 F phenylalanine       2.4         24           1
 G glycine             4.0         40           3
 H histidine           0.9          9           1
 I isoleucine          2.6         26           2
 K lysine              8.4         84           4
 L leucine             7.1         71           2
 M methionine          1.6         16           1
 N asparagine          2.8         28           1
 P proline            10.7        107           6
 Q glutamine           4.8         48           2
 R arginine            3.9         39           2
 S serine             11.1        111           3
 T threonine           6.3         63           2
 V valine              5.1         51           2
 W tryptophan          0.4          4           1
 Y tyrosine            1.7         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transforming, acidic coiled-coil containing protein ... 
TACC2                 0.992   transforming, acidic coiled-coil containing protein ...
TACC2                 0.971   transforming, acidic coiled-coil containing protein...
TACC2                 0.970   transforming, acidic coiled-coil containing protein ...
TACC1                 0.148   transforming, acidic coiled-coil containing protein...
TACC1                 0.144   transforming, acidic coiled-coil containing protein...
TACC1                 0.140   transforming, acidic coiled-coil containing protein...
TACC3                 0.095   transforming, acidic coiled-coil containing protein 3...
NACA                  0.028   nascent polypeptide-associated complex alpha subuni...
PRG4                  0.028   proteoglycan 4 isoform D 
PRG4                  0.028   proteoglycan 4 isoform C 
PRG4                  0.028   proteoglycan 4 isoform B 
PRG4                  0.028   proteoglycan 4 isoform A 
TTN                   0.023   titin isoform N2-A 
FLJ22184              0.023   PREDICTED: hypothetical protein FLJ22184 
NEFH                  0.022   neurofilament, heavy polypeptide 200kDa 
MLL2                  0.022   myeloid/lymphoid or mixed-lineage leukemia 2 
ZAN                   0.022   zonadhesin isoform 3 
ZAN                   0.022   zonadhesin isoform 6 
SRRM1                 0.020   serine/arginine repetitive matrix 1 
NCOR2                 0.019   nuclear receptor co-repressor 2 isoform 1 
NCOR2                 0.019   nuclear receptor co-repressor 2 isoform 2 
MDC1                  0.019   mediator of DNA-damage checkpoint 1 
MUC17                 0.018   mucin 17 
FLJ22184              0.018   PREDICTED: hypothetical protein FLJ22184 
SMC1A                 0.018   structural maintenance of chromosomes 1A 
KIAA0754              0.017   hypothetical protein LOC643314 
MUC2                  0.017   mucin 2 precursor 
FLJ22184              0.017   PREDICTED: hypothetical protein LOC80164 
LOC727832             0.017   golgi autoantigen, golgin subfamily a-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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