C9orf40 6174

Name: C9orf40	Sequence: fasta or formatted (194aa)		NCBI GI: 157388941
Description: hypothetical protein LOC55071		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 17 2 C cysteine 0.5 1 1 D aspartate 7.2 14 2 E glutamate 8.8 17 2 F phenylalanine 2.1 4 1 G glycine 11.3 22 4 H histidine 2.6 5 1 I isoleucine 2.1 4 1 K lysine 2.6 5 1 L leucine 8.2 16 3 M methionine 1.5 3 1 N asparagine 2.6 5 1 P proline 14.4 28 5 Q glutamine 4.1 8 1 R arginine 7.7 15 2 S serine 4.6 9 1 T threonine 3.6 7 1 V valine 3.6 7 1 W tryptophan 2.6 5 1 Y tyrosine 1.0 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC55071 LOC100293055 0.046 PREDICTED: similar to COL22A1 protein VASP 0.041 vasodilator-stimulated phosphoprotein PELP1 0.041 proline, glutamic acid and leucine rich protein 1 [... BPTF 0.041 bromodomain PHD finger transcription factor isoform ... BPTF 0.041 bromodomain PHD finger transcription factor isoform ... COL7A1 0.038 alpha 1 type VII collagen precursor WASF1 0.038 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.038 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.038 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.038 Wiskott-Aldrich syndrome protein family member 1 [Hom... KIAA1522 0.038 hypothetical protein LOC57648 ARID1A 0.036 AT rich interactive domain 1A isoform a ARID1A 0.036 AT rich interactive domain 1A isoform b PRB1 0.036 proline-rich protein BstNI subfamily 1 isoform 1 pre... COL2A1 0.036 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.036 collagen, type II, alpha 1 isoform 2 precursor [Hom... WNK1 0.036 WNK lysine deficient protein kinase 1 LOC100127891 0.036 PREDICTED: hypothetical protein FAM171A2 0.033 family with sequence similarity 171, member A2 [Hom... LOC100134240 0.033 PREDICTED: hypothetical protein LOC339742 0.033 PREDICTED: hypothetical protein COL19A1 0.033 alpha 1 type XIX collagen precursor SAMD1 0.033 sterile alpha motif domain containing 1 COL1A1 0.033 alpha 1 type I collagen preproprotein LOC100291220 0.033 PREDICTED: hypothetical protein XP_002347633 LOC100287224 0.033 PREDICTED: hypothetical protein XP_002343483 MAP4K1 0.033 mitogen-activated protein kinase kinase kinase kina... MAP4K1 0.033 mitogen-activated protein kinase kinase kinase kinase... C16orf11 0.031 hypothetical protein LOC146325 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.