BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|4559408 colony stimulating factor 2 receptor, beta precursor [Homo sapiens] (897 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|4559408 colony stimulating factor 2 receptor, beta precursor ... 1868 0.0 gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 70 7e-12 gi|163965366 nascent polypeptide-associated complex alpha subuni... 70 7e-12 gi|4557669 interleukin 4 receptor alpha chain isoform a precurso... 70 9e-12 gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 70 9e-12 gi|19924097 synapsin I isoform Ib [Homo sapiens] 69 2e-11 gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 68 4e-11 gi|110832843 TBP-associated factor 4 [Homo sapiens] 66 1e-10 gi|19924099 synapsin I isoform Ia [Homo sapiens] 66 1e-10 gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 65 3e-10 gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 65 3e-10 gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 65 3e-10 gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 64 5e-10 gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 63 1e-09 gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 63 1e-09 gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 63 1e-09 gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 63 1e-09 gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 63 1e-09 gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 63 1e-09 gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 63 1e-09 gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 62 2e-09 gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 62 2e-09 gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 62 2e-09 gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 62 3e-09 gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 61 4e-09 gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 61 4e-09 gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 61 4e-09 gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 60 9e-09 gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 60 9e-09 gi|38373671 SEC24-related protein C [Homo sapiens] 60 1e-08 >gi|4559408 colony stimulating factor 2 receptor, beta precursor [Homo sapiens] Length = 897 Score = 1868 bits (4840), Expect = 0.0 Identities = 897/897 (100%), Positives = 897/897 (100%) Query: 1 MVLAQGLLSMALLALCWERSLAGAEETIPLQTLRCYNDYTSHITCRWADTQDAQRLVNVT 60 MVLAQGLLSMALLALCWERSLAGAEETIPLQTLRCYNDYTSHITCRWADTQDAQRLVNVT Sbjct: 1 MVLAQGLLSMALLALCWERSLAGAEETIPLQTLRCYNDYTSHITCRWADTQDAQRLVNVT 60 Query: 61 LIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLG 120 LIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLG Sbjct: 61 LIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLG 120 Query: 121 TRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQD 180 TRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQD Sbjct: 121 TRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQD 180 Query: 181 SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 240 SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG Sbjct: 181 SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 240 Query: 241 DEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGEEECSPVLREGLGSL 300 DEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGEEECSPVLREGLGSL Sbjct: 241 DEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGEEECSPVLREGLGSL 300 Query: 301 HTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAPPSLNVTKDGDSYSLRWET 360 HTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAPPSLNVTKDGDSYSLRWET Sbjct: 301 HTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAPPSLNVTKDGDSYSLRWET 360 Query: 361 MKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTG 420 MKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTG Sbjct: 361 MKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTG 420 Query: 421 YNGIWSEWSEARSWDTESVLPMWVLALIVIFLTIAVLLALRFCGIYGYRLRRKWEEKIPN 480 YNGIWSEWSEARSWDTESVLPMWVLALIVIFLTIAVLLALRFCGIYGYRLRRKWEEKIPN Sbjct: 421 YNGIWSEWSEARSWDTESVLPMWVLALIVIFLTIAVLLALRFCGIYGYRLRRKWEEKIPN 480 Query: 481 PSKSHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIE 540 PSKSHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIE Sbjct: 481 PSKSHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIE 540 Query: 541 DPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSR 600 DPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSR Sbjct: 541 DPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSR 600 Query: 601 SLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQ 660 SLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQ Sbjct: 601 SLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQ 660 Query: 661 GAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFT 720 GAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFT Sbjct: 661 GAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFT 720 Query: 721 PNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSP 780 PNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSP Sbjct: 721 PNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSP 780 Query: 781 RNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPS 840 RNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPS Sbjct: 781 RNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPS 840 Query: 841 SPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDYLSLPPWEVNKPGEVC 897 SPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDYLSLPPWEVNKPGEVC Sbjct: 841 SPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDYLSLPPWEVNKPGEVC 897 >gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] Length = 680 Score = 70.5 bits (171), Expect = 7e-12 Identities = 112/401 (27%), Positives = 140/401 (34%), Gaps = 59/401 (14%) Query: 497 PGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTTP 556 PG G P QGP G+ P GF + +P + G P Sbjct: 147 PGPAGISVPGKPGQQGPTGAPGPR-------GFPGEKGAPGVPGMNGQKGEMGYGAPGRP 199 Query: 557 AASDLPTEQPPSPQPGPPAASHTPE---------KQASSFDFNGPYLGPPHSRSLPDILG 607 LP Q P+ GPP E K F +GPP + P G Sbjct: 200 GERGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERG 259 Query: 608 QPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMG-PG-QAVEVERRPSQGAAGS 665 + G + PG LP + P G PG ++ ER P+ G G Sbjct: 260 PEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPA-GLPGG 318 Query: 666 PSLESGGGPA-----PPALGP--RVGGQDQKDSPVA--IPMSSGDTEDPGVASGYVSSAD 716 P + GPA P GP +G Q K P + +P G+T G A GY + Sbjct: 319 PGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPA-GYPGAKG 377 Query: 717 LVFTPNS-GASSVSLVPSL----GLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPP 771 +P S G P L G P P PG+ GPPG PGPV G G +P Sbjct: 378 ERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVG-GPPGLPGPV--GPAGAKGMPG 434 Query: 772 IEGRSPRSPRNNPVPPEAKSPVLN------PGERPADVSPTSPQPEGLLVLQQVGDYCFL 825 G + PR P P + P+ PG + SP P P G+ G Sbjct: 435 HNGEA--GPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTG-- 490 Query: 826 PGLGPGPLSLRSKPSSPG-PGPEIKNLDQAFQVKKPPGQAV 865 P PGP +P PG PGP PPGQAV Sbjct: 491 PPGPPGPRGHSGEPGLPGPPGP-----------PGPPGQAV 520 Score = 47.8 bits (112), Expect = 5e-05 Identities = 81/325 (24%), Positives = 100/325 (30%), Gaps = 64/325 (19%) Query: 571 PGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLEYLC 630 PGPP + S P G P + P + G P P G PG Sbjct: 62 PGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGK----- 116 Query: 631 LPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGGGPAPPAL----GPRVGGQ 686 PG+ + G AG P G P PP + G V G+ Sbjct: 117 -----------------PGERGPYGPKGDVGPAGLPGPR--GPPGPPGIPGPAGISVPGK 157 Query: 687 DQKDSPVAIPMSSG---DTEDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPS 743 + P P G + PGV ++ G + GLP Q P+ Sbjct: 158 PGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEM------GYGAPGRPGERGLPGPQGPT 211 Query: 744 LCPGLASGPPGAPGPVKSGFEGYVELPPIEG-------RSPRSPRNNPVPPEAKSP--VL 794 GP G PG K G G P I+G P P PP + P + Sbjct: 212 -------GPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIG 264 Query: 795 NPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLG----PGPLSLRSKPSSPGPGPEIK- 849 PG A P P +GL + PG G PG R PG GP K Sbjct: 265 KPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPG-GPGAKG 323 Query: 850 -----NLDQAFQVKKPPGQAVPQVP 869 L + PPG PQ P Sbjct: 324 EQGPAGLPGKPGLTGPPGNMGPQGP 348 Score = 47.4 bits (111), Expect = 6e-05 Identities = 83/330 (25%), Positives = 107/330 (32%), Gaps = 61/330 (18%) Query: 497 PGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSP-----LTIEDPKHVCDPPSG 551 PG M G P QGP G R PE G+ G + P + + PP Sbjct: 240 PGEMGPI--GPPGPQGPPGERGPE--GIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGP 295 Query: 552 PDT-TPAASDLPTEQPPSPQPGPPAAS--HTPEKQASSFDFNGP--YLGPPHSRSLPDIL 606 P P L E+ P+ PG P A P GP +GP + +P Sbjct: 296 PGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSH 355 Query: 607 GQPEPPQEGG-SQKSPPPGSLEYLCLPAGGQVQLVPLAQAM----------GPGQAVEVE 655 G P P E G + + PG+ P P + GP V Sbjct: 356 GLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVG 415 Query: 656 RRPSQ----GAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGY 711 P G AG+ + G A P P + G P IP G DPG Sbjct: 416 GPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPG----- 470 Query: 712 VSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPP 771 + G + + + GL +GPPG PGP G G LP Sbjct: 471 ----------SPGPPGPAGIATKGLNG----------PTGPPGPPGP--RGHSGEPGLPG 508 Query: 772 IEGRSPRSPRNNPVPPEAKSPVLNPGERPA 801 G P P V PE + G+RP+ Sbjct: 509 PPG--PPGPPGQAVMPEG---FIKAGQRPS 533 >gi|163965366 nascent polypeptide-associated complex alpha subunit isoform a [Homo sapiens] Length = 2078 Score = 70.5 bits (171), Expect = 7e-12 Identities = 112/426 (26%), Positives = 143/426 (33%), Gaps = 72/426 (16%) Query: 496 PPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSG---- 551 PP + G P P G+ P V P + SP PK PP+ Sbjct: 988 PPAATPPSPKGGPATPSPKGAPTPP--AVTPPS---PKGSPAATPFPKGASTPPAATPPS 1042 Query: 552 PDTTPAASDLPTEQP-------PSPQPGPPAAS----HTPEKQASSFDFNGPYLGPPHSR 600 P +PAA+ LP P PSP+ GP S TP GP P Sbjct: 1043 PKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGA 1102 Query: 601 SLPDILGQPEP------PQEGGSQKSP---PPGSLEYLCLPAGGQVQLVPLAQAMGPGQA 651 +P P P P G+ +P PP L P P A P Sbjct: 1103 PMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGG 1162 Query: 652 VEV---ERRPSQGAAGSPSLESG-------GGPAPPALGP--RVGG------QDQKDSPV 693 + + P+ AA PS + G G P PA P GG + +P Sbjct: 1163 LATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA 1222 Query: 694 AIPMS-SGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGP 752 A P S G P + A +P G ++ + P+ PSL GLA+ P Sbjct: 1223 ATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPP 1282 Query: 753 -PGAPGPVKSGFEGYVELPPIEGRSPRS--PRNNPVPPEA--KSPVLNPGERPADVSP-- 805 GAP P V PP P + P+ P PP A SP +PG P +P Sbjct: 1283 HKGAPNPA-------VVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTP 1335 Query: 806 ---TSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSK--PSSPGPGPEIKNLDQAFQVKKP 860 T P P+G L P GP + SK P+ P P K Sbjct: 1336 PAVTPPSPKGTPTLPAT-----TPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPK 1390 Query: 861 PGQAVP 866 G A+P Sbjct: 1391 RGPAIP 1396 Score = 60.8 bits (146), Expect = 5e-09 Identities = 96/396 (24%), Positives = 128/396 (32%), Gaps = 92/396 (23%) Query: 526 PVGFGDSEVSPLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPG------------- 572 P+G S VSP+ G +PA + PT PPSP+ Sbjct: 820 PIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPT--PPSPKGAPTPSAVTPLSPKG 877 Query: 573 ---PPAASHTPEKQASSFDFNGPYL--------------GPPHSRSLPDILGQPEPPQEG 615 PP + TP F GP P +R+ P G P P Sbjct: 878 VTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPK 937 Query: 616 GSQKSP---PPGSLEYLCLPAGGQVQLVPLAQAMGP--GQAVEVER-RPSQGAAGSPSLE 669 G+ P PP P+ P A P G A + P+ AA PS + Sbjct: 938 GAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPK 997 Query: 670 SG-------GGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPN 722 G G P PPA+ P K SP A P G + P + Sbjct: 998 GGPATPSPKGAPTPPAVTP----PSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLP 1053 Query: 723 SGASSVSLVPSLGLPSDQTPSLCPGL--ASGPPGAPGPVKSGFEGYVELPPIEGRSPRSP 780 GA + P+ LPS + P L A PP A P G G + SP Sbjct: 1054 KGAPT---TPAATLPSPKGGPATPSLKGAPTPPAATPPSPKG-----------GPATPSP 1099 Query: 781 RNNPVPPEAKSP-----VLNPGERPADVSP--TSPQPEGLLVLQQVGDYCFLPGLGPGPL 833 + P+PP A P + P + A +P T P P+G L P P Sbjct: 1100 KGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLAT-------------PPPK 1146 Query: 834 SLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVP 869 + P++ P P+ + PP + P P Sbjct: 1147 GAPTTPAATPPSPK-------GGLATPPPKGAPTTP 1175 Score = 60.8 bits (146), Expect = 5e-09 Identities = 80/307 (26%), Positives = 105/307 (34%), Gaps = 49/307 (15%) Query: 549 PSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGP-PHSRSLPDILG 607 P TPA +P P P PPAA TP P P P + + P G Sbjct: 918 PKKARATPAPKGIPASPSPKGAPTPPAA--TPPSPKGGPATPSPKWAPTPPAATPPSPKG 975 Query: 608 QPEPPQEGGSQKSP---PPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAG 664 P P G+ P PP P GG P A P + S A Sbjct: 976 GPATPSPKGAPTPPAATPPS-------PKGGPATPSPKG-APTPPAVTPPSPKGSPAATP 1027 Query: 665 SPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSG 724 P G PPA P K SP A P+ G P A + +P G Sbjct: 1028 FPK----GASTPPAATP----PSPKGSPAATPLPKGAPTTP---------AATLPSPKGG 1070 Query: 725 ASSVSLVPSLGLPSDQTPSLCPGLAS-GPPGAPGP---VKSGFEGYVELPPIEGRSPRSP 780 ++ SL + P+ PS G A+ P GAP P +G + PP +G +P +P Sbjct: 1071 PATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKG-APTTP 1129 Query: 781 RNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPS 840 P P+ P P + T P P+G L P P + P+ Sbjct: 1130 AATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLAT-------------PPPKGAPTTPA 1176 Query: 841 SPGPGPE 847 + P P+ Sbjct: 1177 ATPPSPK 1183 Score = 52.4 bits (124), Expect = 2e-06 Identities = 93/396 (23%), Positives = 131/396 (33%), Gaps = 59/396 (14%) Query: 496 PPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSG---- 551 PP + GSP P G+ P V P + P T K PS Sbjct: 1312 PPAATPPSPKGSPGTPPPKGAPTPP--AVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGP 1369 Query: 552 --PDTTPAASDLPTEQPPSPQPGP-----------PAASHTPEKQASSFDFNGPYLGPPH 598 P TP+ P PPSP+ GP PA K+A + P Sbjct: 1370 TPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPS 1429 Query: 599 SRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRP 658 L P ++ + +P G PA + P A+ P E P Sbjct: 1430 KGDLTPPAVTPVSLKKAPATSAPKGG-------PATPSSKGDPTLPAVTPPSPKE-PPAP 1481 Query: 659 SQGAAGSPSLESGGGPAP------PALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYV 712 Q A S ++ PAP PA+ P SP +P + DP + + Sbjct: 1482 KQVATSSSPKKAPATPAPMGAPTLPAVIP--------SSPKEVPATPSSRRDPIAPTATL 1533 Query: 713 SSADLVFTPNSGASSVSLV-PSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPP 771 S TP + A +L+ P++ +PS P P + + P + P Sbjct: 1534 LSKK---TPATLAPKEALIPPAMTVPS---PKKTPAIPTPKEAPATPSSKEASSPPAVTP 1587 Query: 772 IEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPE-GLLVLQQVGDYCFLPGLGP 830 + SP+ +PP SP +P E P + T P PE G G P Sbjct: 1588 STYKGAPSPKELLIPPAVTSP--SPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPP---V 1642 Query: 831 GPLSLRSKPSSPGP-----GPEIKNLDQAFQVKKPP 861 P SL+ P+SP G + + KK P Sbjct: 1643 TPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGP 1678 >gi|4557669 interleukin 4 receptor alpha chain isoform a precursor [Homo sapiens] Length = 825 Score = 70.1 bits (170), Expect = 9e-12 Identities = 153/688 (22%), Positives = 238/688 (34%), Gaps = 143/688 (20%) Query: 246 QNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGEEE-CSPVLREGLGSLHTRH 304 Q C D ++ +C W++ S L Y+ E C P G G + Sbjct: 30 QEPTCVSDYMSISTCEWKMNGPTNCSTELRLLYQLVFLLSEAHTCIPENNGGAGCV---- 85 Query: 305 HCQIPVPDPATHGQYIVSV---QPRRAEKHIKSSVNIQ-MAPPSLNV-TKDGDSYSLRWE 359 C + + D + Y + + Q + K S +++ AP +L V T D+ L W Sbjct: 86 -CHLLMDDVVSADNYTLDLWAGQQLLWKGSFKPSEHVKPRAPGNLTVHTNVSDTLLLTWS 144 Query: 360 TM----KMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVR 415 Y H+ + I D A ++ L+ + +A L+ Y R RVR Sbjct: 145 NPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISY--RARVR 202 Query: 416 TSRTGYNGIWSEWSEARSWDTESVLPMWVLALIVIFLTIAVLLAL-RFCGIYGYRLRRKW 474 YN WSEWS + W P L+ + ++ V+LA+ C + +++++W Sbjct: 203 AWAQCYNTTWSEWSPSTKWHNSYREPFEQHLLLGVSVSCIVILAVCLLCYVSITKIKKEW 262 Query: 475 EEKIPNPSKSHL----FQNGSAELWPPGSMSAFTSGSPPHQGP-WGSRFPELEGVFP--- 526 ++IPNP++S L Q+ W S G P + P W + +L F Sbjct: 263 WDQIPNPARSRLVAIIIQDAQGSQWEKRS-----RGQEPAKCPHWKNCLTKLLPCFLEHN 317 Query: 527 ----------------VGFGDSEVSPLTIEDPKHVCDPPS-----GPDTTPAASDLPTEQ 565 G G S P +E K V P S + A + E+ Sbjct: 318 MKRDEDPHKAAKEMPFQGSGKSAWCP--VEISKTVLWPESISVVRCVELFEAPVECEEEE 375 Query: 566 PPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSL-PDILGQPE----PPQEGGSQKS 620 + G AS PE F + + SL D+LG+ G S Sbjct: 376 EVEEEKGSFCAS--PESSRDDFQEGREGIVARLTESLFLDLLGEENGGFCQQDMGESCLL 433 Query: 621 PPPGS----LEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQG--------------- 661 PP GS + + P+ G + P G Q + +E P Sbjct: 434 PPSGSTSAHMPWDEFPSAGPKEAPP----WGKEQPLHLEPSPPASPTQSPDNLTCTETPL 489 Query: 662 -AAGSPSLES-----GGGPAPPALG-------------PRVGGQDQKDSPVAIPMSSGDT 702 AG+P+ S P P LG P + Q P +P +T Sbjct: 490 VIAGNPAYRSFSNSLSQSPCPRELGPDPLLARHLEEVEPEMPCVPQLSEPTTVPQPEPET 549 Query: 703 EDP---------GVASGYVSS-----ADLVFTPNSGASSVSLVPSLGLPSD----QTPSL 744 + G A+ VS+ + V G + S V LG P + SL Sbjct: 550 WEQILRRNVLQHGAAAAPVSAPTSGYQEFVHAVEQGGTQASAVVGLGPPGEAGYKAFSSL 609 Query: 745 CPGLASGPPGAPGPVKSGFEGY----------------VELP----PIEGRSPRSPRNNP 784 A P SG EGY V +P ++ PRSP+++ Sbjct: 610 LASSAVSPEKCGFGASSGEEGYKPFQDLIPGCPGDPAPVPVPLFTFGLDREPPRSPQSSH 669 Query: 785 VPPEAKSPV-LNPGERPADVSPTSPQPE 811 +P + + L PGE+ D+ P P P+ Sbjct: 670 LPSSSPEHLGLEPGEKVEDM-PKPPLPQ 696 Score = 31.2 bits (69), Expect = 4.5 Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 10/125 (8%) Query: 30 LQTLRCYNDYTSHITCRWADTQDAQRLVNVTLIRRVNEDLLEPVSCDLSDDMPWSACPHP 89 LQ C +DY S TC W + L+ ++ L E +C + ++ + C Sbjct: 29 LQEPTCVSDYMSISTCEWKMNGPTNCSTELRLLYQLVFLLSEAHTC-IPENNGGAGCV-- 85 Query: 90 RCVPRRCVIPCQSFVVTDVDYFSFQPDRPLGTRLTVTLTQHVQPPEPRDLQISTD-QDHF 148 C + V D + L + + ++HV+P P +L + T+ D Sbjct: 86 ------CHLLMDDVVSADNYTLDLWAGQQLLWKGSFKPSEHVKPRAPGNLTVHTNVSDTL 139 Query: 149 LLTWS 153 LLTWS Sbjct: 140 LLTWS 144 >gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo sapiens] Length = 5537 Score = 70.1 bits (170), Expect = 9e-12 Identities = 108/434 (24%), Positives = 152/434 (35%), Gaps = 80/434 (18%) Query: 494 LWPPGSMSAFTSG-----SPPHQGPWGSRF-------PELEGVFPVGFGDSEVSPLTIED 541 L PP S F+ SPP + P PE + P F +S +SP Sbjct: 503 LSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPP-FEESPLSP----P 557 Query: 542 PKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSR- 600 P+ + P S P S P E P SP P S PE F L PP Sbjct: 558 PEEL--PTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEES 615 Query: 601 --SLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRP 658 S P + PP E S SPPP P ++ +P+ + P P Sbjct: 616 PLSPPPEASRLSPPPE-DSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSP--------PP 666 Query: 659 SQGAAGSPSLESGGGPAPPA--LGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSAD 716 + P ES P P A L P +DSP + P P Sbjct: 667 EESPLSPPPEESPTSPPPEASRLSP-----PPEDSPTSPPPEDSPASPP----------- 710 Query: 717 LVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRS 776 P S+ L S LP + P LCP + GP +P P + E P + ++ Sbjct: 711 ----PEDSLMSLPLEESPLLPLPEEPQLCP-RSEGPHLSPRPEEPHLSPRPEEPHLSPQA 765 Query: 777 PRSPRNNPVP---------------PEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGD 821 P +P P P+A+ P L+P +SP + +P V ++ Sbjct: 766 -EEPHLSPQPEEPCLCAVPEEPHLSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEP-- 822 Query: 822 YCFLPGLGPGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQD 881 C P LS +S+ P PE +L +++KPP P+ P + + ++ Sbjct: 823 -CLSPQPEESHLSPQSEEPCLSPRPEESHLSP--ELEKPPLSPRPEKPPEEPGQCPAPEE 879 Query: 882 YLSLPPWEVNKPGE 895 PP PGE Sbjct: 880 LPLFPP-----PGE 888 Score = 60.5 bits (145), Expect = 7e-09 Identities = 107/406 (26%), Positives = 150/406 (36%), Gaps = 65/406 (16%) Query: 491 SAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPS 550 ++ L PP S + PP + P S PE +FP F +S +SP E P + PP Sbjct: 569 ASRLSPPPEESPMSP--PPEESPM-SPPPEASRLFPP-FEESPLSPPPEESP--LSPPPE 622 Query: 551 GPDTTPAASDLPTEQPP--SPQPGPPAASHTP-------------EKQASSFDFNGPYLG 595 +P D P PP SP PP S E S P Sbjct: 623 ASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSP 682 Query: 596 PPHSRSL--PDILGQPEPPQEGGSQKSPPPGSLEYL------CLPAGGQVQLVPLAQAMG 647 PP + L P PP E PP SL L LP + QL P ++ G Sbjct: 683 PPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLPLPEEPQLCPRSE--G 740 Query: 648 PGQAVEVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGV 707 P + E P L +P A P + Q ++ A+P E+P + Sbjct: 741 PHLSPRPEEPHLSPRPEEPHL------SPQAEEPHLSPQPEEPCLCAVP------EEPHL 788 Query: 708 ASGYVSSADLVFTPNSGASSVSLVPS-LGL-PSDQTPSLCPGLASGPPGAPGPVKSGFEG 765 + P + +S P L L P + P L P + P +P P +S Sbjct: 789 S------------PQAEGPHLSPQPEELHLSPQTEEPHLSP-VPEEPCLSPQPEESHLSP 835 Query: 766 YVELPPIEGRSPRSPRNNPVPPEAKSPVLNP-GERPADVSPTSPQPEGLLVLQQVGDYCF 824 E P + SPR ++ + PE + P L+P E+P + P PE L + G+ Sbjct: 836 QSEEPCL---SPRPEESH-LSPELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPSL 891 Query: 825 LPGLGPGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVPV 870 P LG LS +P P PE L + + P Q +P P+ Sbjct: 892 SPLLGEPALSEPGEPPL-SPLPEELPLSPSGEPSLSP-QLMPPDPL 935 Score = 55.8 bits (133), Expect = 2e-07 Identities = 88/366 (24%), Positives = 121/366 (33%), Gaps = 52/366 (14%) Query: 531 DSEVSPLTIEDPKHVCDPPSGPDTTPAASDLPT--------------EQPPSPQPGPPAA 576 +S +SP E P PP +P +LP E P SP P Sbjct: 446 ESPLSPPPEESP--TSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPL 503 Query: 577 SHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGG--------SQKSPPPGSLEY 628 S PE S P P S P + PP E S SPPP L Sbjct: 504 SPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEELPT 563 Query: 629 LCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGGGPAPP---ALGPRVGG 685 P ++ P M P P + + P E PP L P Sbjct: 564 SPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEA 623 Query: 686 QDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLC 745 P PMS E P VS S + +V L P +++P Sbjct: 624 SRLSPPPEDSPMSPPPEESPMSPPPEVSR----------LSPLPVVSRLSPPPEESPLSP 673 Query: 746 PGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSP 805 P S P +P P S + PP + + P ++P P + +++ P + SP Sbjct: 674 PPEES--PTSPPPEAS----RLSPPPEDSPTSPPPEDSPASPPPEDSLMS---LPLEESP 724 Query: 806 TSPQPEGLLVLQQVGDYCFLPGLGPGPLS--LRSKPSSPGPGPEIKNLDQAFQVKKPPGQ 863 P PE Q+ P L P P L +P P P+ + + Q ++P Sbjct: 725 LLPLPEE----PQLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPHLSPQPEEPCLC 780 Query: 864 AVPQVP 869 AVP+ P Sbjct: 781 AVPEEP 786 Score = 54.3 bits (129), Expect = 5e-07 Identities = 90/331 (27%), Positives = 126/331 (38%), Gaps = 44/331 (13%) Query: 507 SPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTTPAA-----SDL 561 SPP + S PE + + + +S + PL E+P+ +C GP +P S Sbjct: 699 SPPPEDSPASPPPE-DSLMSLPLEESPLLPLP-EEPQ-LCPRSEGPHLSPRPEEPHLSPR 755 Query: 562 PTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEP----PQEGGS 617 P E SPQ P S PE+ P+L P P + QPE PQ Sbjct: 756 PEEPHLSPQAEEPHLSPQPEEPCLCAVPEEPHLSPQAEG--PHLSPQPEELHLSPQTEEP 813 Query: 618 QKSPPPGSLEYLCL-PAGGQVQLVPLAQ--AMGPGQ-----AVEVERRPSQGAAGSPSLE 669 SP P E CL P + L P ++ + P + E+E+ P P E Sbjct: 814 HLSPVP---EEPCLSPQPEESHLSPQSEEPCLSPRPEESHLSPELEKPPLSPRPEKPPEE 870 Query: 670 SGGGPAP-----------PALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLV 718 G PAP P+L P +G + P P+S E P SG S + + Sbjct: 871 PGQCPAPEELPLFPPPGEPSLSPLLG-EPALSEPGEPPLSPLPEELPLSPSGEPSLSPQL 929 Query: 719 FTPNSGASSVSLVPSLGLPSDQTPSLCP-GLASGPPGAPGPVKSGFEGYVELPPIEGRSP 777 P+ +S + + P P+L P G P GA G S E + P +E Sbjct: 930 MPPDPLPPPLSPIITAAAP----PALSPLGELEYPFGAKGD--SDPESPLAAPILETPIS 983 Query: 778 RSPRNNPVPPEAKSPVLNPGERPADVSPTSP 808 P N PE P++ P + V P SP Sbjct: 984 PPPEANCTDPEPVPPMILPPSPGSPVGPASP 1014 Score = 51.2 bits (121), Expect = 4e-06 Identities = 87/342 (25%), Positives = 118/342 (34%), Gaps = 75/342 (21%) Query: 502 AFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPD-------- 553 AF +GS H FP P G ++V + + P V P +G Sbjct: 2478 AFKAGSLAHTSLGAGGFPAALPAGPAGELHAKVP--SGQPPNFVRSPGTGAFVGTPSPMR 2535 Query: 554 -TTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPP 612 T P A P+ +PP PQPG P P +S GP LG P S + G P Sbjct: 2536 FTFPQAVGEPSLKPPVPQPGLP-----PPHGINSHFGPGPTLGKPQSTNYTVATGNFHP- 2589 Query: 613 QEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGG 672 GS P GS G L PL RP PS+ Sbjct: 2590 --SGSPLGPSSGS-------TGESYGLSPL--------------RP-------PSVLPP- 2618 Query: 673 GPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGY-VSSADLVFTPNSGASSVSL- 730 PAP P + + S + P+ EDPG G +++A+L T + G S +S Sbjct: 2619 -PAPDGSLPYLSHGASQRSGITSPVEK--REDPGTGMGSSLATAELPGTQDPGMSGLSQT 2675 Query: 731 -------------------VPSLGLPSDQTPSLCPGLASGPPGAPG--PVKSGFEGYVE- 768 + L ++ + A GPPG+ G P FE Sbjct: 2676 ELEKQRQRQRLRELLIRQQIQRNTLRQEKETAAAAAGAVGPPGSWGAEPSSPAFEQLSRG 2735 Query: 769 LPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQP 810 P G +S P + P+L PG P+D + P P Sbjct: 2736 QTPFAGTQDKSSLVGLPPSKLSGPILGPGSFPSDDRLSRPPP 2777 Score = 47.4 bits (111), Expect = 6e-05 Identities = 105/401 (26%), Positives = 142/401 (35%), Gaps = 99/401 (24%) Query: 556 PAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEP-PQE 614 PA S TE P + Q GP A TPE A+ + P S +L QP+P PQ Sbjct: 4031 PAVSSEATEGPSTHQGGPLAIGTTPESMAT----EPGEVKPSLSGDSQLLLVQPQPQPQP 4086 Query: 615 GGSQKSPP---PGSLEY---LCLPAGG------------QVQLVP--LAQ---AMG--PG 649 Q PP PG + L AGG + VP LAQ ++G PG Sbjct: 4087 SSLQLQPPLRLPGQQQQQVSLLHTAGGGSHGQLGSGSSSEASSVPHLLAQPSVSLGDQPG 4146 Query: 650 QAVEVERRPSQGAAGSPSLESGGGPAPPALGPRV-GGQDQKDSPVAIPMSSGDTEDPGVA 708 + P Q P +++ GP PP GP + GQ + + + GV Sbjct: 4147 SMTQNLLGPQQPMLERP-MQNNTGPQPPKPGPVLQSGQGLPGVGIMPTVGQLRAQLQGVL 4205 Query: 709 SGYVS------------SADLVFTPNSGASSVSLVPSLGLPSDQTPSL------------ 744 + A L+ + +V P P QT L Sbjct: 4206 AKNPQLRHLSPQQQQQLQALLMQRQLQQSQAVRQTPPYQEPGTQTSPLQGLLGCQPQLGG 4265 Query: 745 CPGLASGP----------------PGAPGPVKSG---FEGYVELPPIEGRSPRSPRNNP- 784 PG +GP P PG + +G + PP + P+ P P Sbjct: 4266 FPGPQTGPLQELGAGPRPQGPPRLPAPPGALSTGPVLGPVHPTPPPSSPQEPKRPSQLPS 4325 Query: 785 ----VPPEAKSPVLNPGERPADVSPTSPQPEGLL--VLQQVGDYCFLPGLG----PGPLS 834 +P EA+ P +PG P PT P G + Q+ D F GLG P L+ Sbjct: 4326 PSSQLPTEAQLPPTHPG-TPKPQGPTLEPPPGRVSPAAAQLADTLFSKGLGPWDPPDNLA 4384 Query: 835 LRSKP--SSPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQL 873 KP SS PG +LDQ GQ VP+ + + Sbjct: 4385 ETQKPEQSSLVPG----HLDQV------NGQVVPEASQLSI 4415 Score = 39.7 bits (91), Expect = 0.013 Identities = 75/291 (25%), Positives = 102/291 (35%), Gaps = 63/291 (21%) Query: 612 PQEGGSQKSPPPGSLEYLCL--PAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAG---SP 666 P E G + P +L C P GG V + Q PG ++ E +P G AG P Sbjct: 374 PPEPGDTPTDEPDALYVACQGQPKGGHVTSM---QPKEPGP-LQCEAKPL-GKAGVQLEP 428 Query: 667 SLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGAS 726 LE+ P L P ++SP++ P T P AS Sbjct: 429 QLEAPLNEEMPLLPP------PEESPLSPPPEESPTSPPPEAS----------------- 465 Query: 727 SVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSPRNNPVP 786 L P ++ P AS P A + E + PP E P ++P Sbjct: 466 ------RLSPPPEELP------ASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFS 513 Query: 787 PEAKSPVLNPGE---RPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSPG 843 P +SP+ P E PA +P SP PE + P PLS + Sbjct: 514 PLEESPLSPPEESPPSPALETPLSPPPEASPL---------SPPFEESPLSPPPEELPTS 564 Query: 844 PGPEIKNLDQAFQVK--KPPGQAVPQVP---VIQLFKALKQQDYLSLPPWE 889 P PE L + PP + P P +LF ++ LS PP E Sbjct: 565 PPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESP-LSPPPEE 614 Score = 37.0 bits (84), Expect = 0.082 Identities = 81/297 (27%), Positives = 110/297 (37%), Gaps = 36/297 (12%) Query: 571 PGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGSQKSPP-PGSLEYL 629 P P A +P A+ F G P + D G +PP GS P PG L +L Sbjct: 2107 PPQPGALGSPPPAAAPTIFIGSPTTPAGLSTSAD--GFLKPP--AGSVPGPDSPGEL-FL 2161 Query: 630 CLPAGGQVQLVPLAQAMGPGQAVEVERR-PSQGAAGSPSLESGGGPA-PPALG----PRV 683 LP Q VP G A +E R P+ P G PA PP LG P Sbjct: 2162 KLPPQVPAQ-VPSQDPFGLAPAYPLEPRFPTAPPTYPPYPSPTGAPAQPPMLGASSRPGA 2220 Query: 684 GGQDQ-KDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSG-----ASSVSLVP----- 732 G + +P P T DP + S +L + G AS L P Sbjct: 2221 GQPGEFHTTPPGTPRHQPSTPDPFLKPRCPSLDNLAVPESPGVGGGKASEPLLSPPPFGE 2280 Query: 733 ---SLGLPSDQTPSLCPGLASGPPG---APGPVKSGFEGYVELP-PIEGRSPRSPRNNPV 785 +L + ++ + P GPP P G +EL P ++P +PR + V Sbjct: 2281 SRKALEVKKEELGASSPSY--GPPNLGFVDSPSSGTHLGGLELKTPDVFKAPLTPRASQV 2338 Query: 786 PPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSP 842 P++ L P E P +P P + + G Y P P PL+ R +P P Sbjct: 2339 EPQSPGLGLRPQE-PPPAQALAPSPPSHPDIFRPGSYTD-PYAQP-PLTPRPQPPPP 2392 Score = 35.4 bits (80), Expect = 0.24 Identities = 49/176 (27%), Positives = 64/176 (36%), Gaps = 26/176 (14%) Query: 508 PPHQGPWGSRFPELEGVFPVGFGDSEVSPL----TIEDPKHVCDPPSGPDTTPAASDLPT 563 P QGP R P G G V P + ++PK PS P + LP Sbjct: 4281 PRPQGP--PRLPAPPGALSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPP 4338 Query: 564 EQPPSPQP-----GPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGSQ 618 P +P+P PP +P + LGP PD L + + P+ Q Sbjct: 4339 THPGTPKPQGPTLEPPPGRVSPAAAQLADTLFSKGLGP---WDPPDNLAETQKPE----Q 4391 Query: 619 KSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGGGP 674 S PG L+ + GQV VP A + Q E P A S E+ G P Sbjct: 4392 SSLVPGHLDQV----NGQV--VPEASQLSIKQ--EPREEPCALGAQSVKREANGEP 4439 Score = 34.3 bits (77), Expect = 0.53 Identities = 54/228 (23%), Positives = 84/228 (36%), Gaps = 36/228 (15%) Query: 686 QDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLC 745 Q KD+ A ++ + + D+ + A + + P G P+ Sbjct: 2062 QKAKDNRAAHRINKVQKQAESQINKQTKVGDIARKTDRPALHLRIPPQPGALGSPPPAAA 2121 Query: 746 PGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSPRN--NPVPPE--AKSPVLNP-GERP 800 P + G P P + + +G+++ P P SP +PP+ A+ P +P G P Sbjct: 2122 PTIFIGSPTTPAGLSTSADGFLKPPAGSVPGPDSPGELFLKLPPQVPAQVPSQDPFGLAP 2181 Query: 801 A-----------DVSPTSPQPEGLLVLQQVGDYCFLPGLG-PG------PLSLRSKPSSP 842 A P P P G + PG G PG P + R +PS+P Sbjct: 2182 AYPLEPRFPTAPPTYPPYPSPTGAPAQPPMLGASSRPGAGQPGEFHTTPPGTPRHQPSTP 2241 Query: 843 GP--GPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDYLSLPPW 888 P P +LD AVP+ P + KA + LS PP+ Sbjct: 2242 DPFLKPRCPSLDNL---------AVPESPGVGGGKA--SEPLLSPPPF 2278 Score = 30.4 bits (67), Expect = 7.7 Identities = 50/215 (23%), Positives = 73/215 (33%), Gaps = 18/215 (8%) Query: 501 SAFTSGSPPHQGPWGSR-----FPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTT 555 +A +G+ G WG+ F +L G + S L P + P GP + Sbjct: 2707 AAAAAGAVGPPGSWGAEPSSPAFEQLSRGQTPFAGTQDKSSLVGLPPSKLSGPILGPGSF 2766 Query: 556 PAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEG 615 P+ L PP+ S + +F PY G + L Q + Sbjct: 2767 PSDDRLSRPPPPATPSSMDVNSRQLVGGSQAFYQRAPYPGSLPLQQQQQQLWQQQQATAA 2826 Query: 616 GSQKSPPPGSLEYLCLPAGGQVQL-VPLA----QAMGPGQAVEVERRPSQGAAGSPSLES 670 S + P G+ L PLA + GPG+ V P+Q +++ Sbjct: 2827 TSMRFAMSARFPSTPGPELGRQALGSPLAGISTRLPGPGEPVPGPAGPAQFIELRHNVQK 2886 Query: 671 GGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDP 705 G GP G GQ P P+S EDP Sbjct: 2887 GLGPG----GTPFPGQGPPQRPRFYPVS----EDP 2913 Score = 30.4 bits (67), Expect = 7.7 Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 31/112 (27%) Query: 519 PELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTTPAAS------DLPTE---QPPSP 569 P + + + +V L+ P+ PPS +PA+ +LPTE +PP P Sbjct: 4888 PPTQHSYTYNVSNLDVRQLSAPPPEEPSPPPSPLAPSPASPPTEPLVELPTEPLAEPPVP 4947 Query: 570 QPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGSQKSP 621 P P A+S P +R P + PP+EG + P Sbjct: 4948 SPLPLASS------------------PESARPKP----RARPPEEGEDSRPP 4977 >gi|19924097 synapsin I isoform Ib [Homo sapiens] Length = 669 Score = 68.9 bits (167), Expect = 2e-11 Identities = 77/276 (27%), Positives = 92/276 (33%), Gaps = 63/276 (22%) Query: 549 PSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGP--------YLGPPHSR 600 P G T+ + P +Q P PQ GPP P++Q P LGPP Sbjct: 443 PLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGS 502 Query: 601 SLPDILGQP-EPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPS 659 LP L P PQ+ SQ +PP G Q P+A G A PS Sbjct: 503 PLPQRLPSPTSAPQQPASQAAPP---------TQGQGRQSRPVAGGPGAPPAARPPASPS 553 Query: 660 -QGAAGSPSL---ESGGGPAPP-ALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSS 714 Q AG P S GPAPP A G GGQ ++ P P +G Sbjct: 554 PQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAG-------------- 599 Query: 715 ADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEG 774 P AS VP G P+ Q P P PGP + P Sbjct: 600 ------PTRQASQAGPVPRTGPPTTQQPR---------PSGPGPAGRPKPQLAQKP---- 640 Query: 775 RSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQP 810 + VPP A + P SP QP Sbjct: 641 -------SQDVPPPATAAAGGPPHPQLKASPAQAQP 669 Score = 33.9 bits (76), Expect = 0.70 Identities = 48/194 (24%), Positives = 65/194 (33%), Gaps = 29/194 (14%) Query: 681 PRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSLGL-PSD 739 P G Q SP A+P+ ++ P P G P L P Sbjct: 428 PGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPP 487 Query: 740 QTPSLCPGLASGPP-GAPGPVKSGFEGYVELPPIEGRSPRSPRNNPVPP------EAKSP 792 Q GL GPP G+P P + P +P+ P + PP +++ Sbjct: 488 QGQQHLSGL--GPPAGSPLPQRL---------PSPTSAPQQPASQAAPPTQGQGRQSRPV 536 Query: 793 VLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSPGPGPEIKNLD 852 PG PA P SP P+ Q + G P K S PG + Sbjct: 537 AGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAP------PKASGAPPGGQ----Q 586 Query: 853 QAFQVKKPPGQAVP 866 + +KPPG A P Sbjct: 587 RQGPPQKPPGPAGP 600 >gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] Length = 1466 Score = 67.8 bits (164), Expect = 4e-11 Identities = 102/383 (26%), Positives = 129/383 (33%), Gaps = 74/383 (19%) Query: 505 SGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDT--TPAASDLP 562 +G+P +GP P L G + G P E K PP P TP +P Sbjct: 677 AGAPGERGP-----PGLAGAPGLRGGAGPPGP---EGGKGAAGPPGPPGAAGTPGLQGMP 728 Query: 563 TEQ----PPSP-----QPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQ 613 E+ P P +PG P A P K +GP GP P GQP Sbjct: 729 GERGGLGSPGPKGDKGEPGGPGADGVPGK-------DGPR-GPTGPIGPPGPAGQPGDKG 780 Query: 614 EGGSQKSP----PPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLE 669 EGG+ P P GS G + + P A PG + +G G+P + Sbjct: 781 EGGAPGLPGIAGPRGS-------PGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEK 833 Query: 670 SGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVS 729 GGP A P G P + G PG A+G+ + L P S + Sbjct: 834 GEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPG-AAGFPGARGLPGPPGSNGNPGP 892 Query: 730 LVPSLGLPSDQTPSLC--------PGL-----------------ASGPPGAPGPVK---- 760 PS D P PG+ A GPPGAPGP+ Sbjct: 893 PGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGI 952 Query: 761 SGFEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVG 820 +G G P + G PR +P P K PG P P+GL L Sbjct: 953 TGARGLAGPPGMPG-----PRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTA 1007 Query: 821 DYCFLPGLGPGPLSLRSKPSSPG 843 G PG L + SPG Sbjct: 1008 GEPGRDG-NPGSDGLPGRDGSPG 1029 Score = 58.9 bits (141), Expect = 2e-08 Identities = 99/385 (25%), Positives = 126/385 (32%), Gaps = 70/385 (18%) Query: 496 PPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTT 555 PPGS SG P GP G R FP G+ E P GP Sbjct: 553 PPGSQGE--SGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGP--- 607 Query: 556 PAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEG 615 P + + GPP + + + GPP + L + G PP E Sbjct: 608 ------PGKNGETGPQGPPGPTGPGGDKGDT--------GPPGPQGLQGLPGTGGPPGEN 653 Query: 616 GSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGGGPA 675 G P P GG+ A PG+ R G AG+P L G GP Sbjct: 654 GKPGEPGPKGDAGAPGAPGGK------GDAGAPGE------RGPPGLAGAPGLRGGAGPP 701 Query: 676 PPALG---------------PRVGGQDQKDSPVAIPMSSGDTEDP-GVASGYVSSADLVF 719 P G P + G + + P GD +P G + V D Sbjct: 702 GPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKD--- 758 Query: 720 TPNSGASSVSLVPSLGLPSDQTPSLCPGL--ASGPPGAPGPVKSGFEGYVELPPIEGRSP 777 P + G P D+ PGL +GP G+PG + G G PP P Sbjct: 759 GPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPG--ERGETG----PPGPAGFP 812 Query: 778 RSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRS 837 +P N P K PGE+ P P G G P PGP ++ Sbjct: 813 GAPGQNG-EPGGKGERGAPGEKGEGGPPGVAGPPG-------GSG---PAGPPGPQGVKG 861 Query: 838 KPSSPGPGPEIKNLDQAFQVKKPPG 862 + SPG GP A + PPG Sbjct: 862 ERGSPG-GPGAAGFPGARGLPGPPG 885 Score = 58.2 bits (139), Expect = 3e-08 Identities = 87/341 (25%), Positives = 106/341 (31%), Gaps = 53/341 (15%) Query: 549 PSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGP-YLGPPHSRSLPDILG 607 P G P P E +PGP + P D P GPP P + G Sbjct: 637 PQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRG 696 Query: 608 QPEPP-QEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSP 666 PP EGG + PPG P G Q PG + GA G P Sbjct: 697 GAGPPGPEGGKGAAGPPGPPGAAGTP-GLQGMPGERGGLGSPGPKGDKGEPGGPGADGVP 755 Query: 667 SLESGGGPAPPALGPRVGGQ--DQKDS----------PVAIPMSSGDTEDPGVASGYVSS 714 + GP P P GQ D+ + P P G+T PG A G+ + Sbjct: 756 GKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPA-GFPGA 814 Query: 715 ADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLA-----SGPPGAPGPVKSGFEGYVEL 769 P G P ++ PG+A SGP G PGP G +G Sbjct: 815 PGQNGEPGGKGER-------GAPGEKGEGGPPGVAGPPGGSGPAGPPGP--QGVKGERGS 865 Query: 770 PPIEGRSP-RSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGL 828 P G + R P PP + NPG SP P Sbjct: 866 PGGPGAAGFPGARGLPGPPGSNG---NPGPPGPSGSPGKDGP------------------ 904 Query: 829 GPGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVP 869 PGP P SPG + Q + P Q P P Sbjct: 905 -PGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAP 944 Score = 55.1 bits (131), Expect = 3e-07 Identities = 100/356 (28%), Positives = 131/356 (36%), Gaps = 56/356 (15%) Query: 567 PSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGSQKSP-PPGS 625 P P PGPP + P + + GP G P S P G+P P G+Q P PPG Sbjct: 332 PGP-PGPPGTAGFPGSPGAKGEV-GP-AGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPG- 387 Query: 626 LEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGGGP-----APPALG 680 + GG+ ++ P PG GA G+P L G G A G Sbjct: 388 ---INGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPG 444 Query: 681 PRVGGQDQKDSPVAIPMSSGD------TEDPGVASGYVSSADLVFTPN-SGASSVSLVPS 733 PR G+ + +P + G+ +PG A+G +A P G + + +P Sbjct: 445 PR--GERGEAGIPGVPGAKGEDGKDGSPGEPG-ANGLPGAAGERGAPGFRGPAGPNGIPG 501 Query: 734 LGLPSDQTPSLCPGLASGPPGAPG-PVKSGFEGYVELPPIEGRSPRSPRNNPVPPEAKSP 792 P+ + + PG A GP GA G P + G G G R +P P + Sbjct: 502 EKGPAGERGA--PGPA-GPRGAAGEPGRDGVPG--------GPGMRGMPGSPGGPGSDGK 550 Query: 793 VLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGL-----GPGPLSLRSKPSSPGP-GP 846 PG + P P P G Q G F PG PG R P PGP GP Sbjct: 551 PGPPGSQGESGRPGPPGPSG--PRGQPGVMGF-PGPKGNDGAPGKNGERGGPGGPGPQGP 607 Query: 847 EIKNLDQAFQVKKPP-------GQAVPQVPVIQLFKALKQQDYLSLPPWEVNKPGE 895 KN + Q P G P P + L+ PP E KPGE Sbjct: 608 PGKNGETGPQGPPGPTGPGGDKGDTGPPGP-----QGLQGLPGTGGPPGENGKPGE 658 Score = 50.8 bits (120), Expect = 6e-06 Identities = 110/430 (25%), Positives = 142/430 (33%), Gaps = 116/430 (26%) Query: 488 QNGSAELWPPGSMSAFTS----GSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPK 543 + G PPG A + G P +G GS P+ + P G G V + P+ Sbjct: 704 EGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGK--DGPR 761 Query: 544 HVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASH---TPEKQASSFDFNGPYLGPPHSR 600 P+GP P + P ++ PG P + +P ++ + GPP Sbjct: 762 G----PTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGET--------GPPGPA 809 Query: 601 SLPDILGQPEPPQEGGSQKSP-------PPGSLEYLCLPAGGQVQLVPLAQAMGPG-QAV 652 P GQ P G + +P PPG + P GG P PG Q V Sbjct: 810 GFPGAPGQNGEPGGKGERGAPGEKGEGGPPG----VAGPPGGSGPAGP------PGPQGV 859 Query: 653 EVERRP--SQGAAGSPSLE-------SGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTE 703 + ER GAAG P S G P PP GP G KD P ++G Sbjct: 860 KGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPP--GP--SGSPGKDGPPGPAGNTGAPG 915 Query: 704 DPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLA-----------SGP 752 PGV+ P A G P Q P PG +GP Sbjct: 916 SPGVSG-----------PKGDAGQPG---EKGSPGAQGPPGAPGPLGIAGITGARGLAGP 961 Query: 753 PGAPGPVKS----GFEGYVELPPIEG----RSPRSPRNNP-------------------V 785 PG PGP S G +G P G R P P+ P + Sbjct: 962 PGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGL 1021 Query: 786 PPEAKSPVLNPGERPADVSPTSPQPEG-------LLVLQQVGDYCFL----PGLGPGPLS 834 P SP G+R + SP +P G + + GD P PGP Sbjct: 1022 PGRDGSPG-GKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAG 1080 Query: 835 LRSKPSSPGP 844 R P GP Sbjct: 1081 SRGAPGPQGP 1090 Score = 43.9 bits (102), Expect = 7e-04 Identities = 75/265 (28%), Positives = 87/265 (32%), Gaps = 35/265 (13%) Query: 569 PQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGSQKSP-PPGSLE 627 PQP P A + P Q P GPP +P G P P + GS SP PPG E Sbjct: 89 PQP-PTAPTRPPNGQGPQGPKGDP--GPP---GIPGRNGDPGIPGQPGSPGSPGPPGICE 142 Query: 628 YLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQ-GAAGSPSLESGGGPAPPALGPRVG-- 684 P G Q P + V V G AG P G P PP G Sbjct: 143 --SCPTGPQ-NYSPQYDSYDVKSGVAVGGLAGYPGPAGPP-----GPPGPPGTSGHPGSP 194 Query: 685 GQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSL-GLPSDQTPS 743 G P P +G + PG S SG L G P + P+ Sbjct: 195 GSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPA 254 Query: 744 LCPGLAS--------------GPPGAPG-PVKSGFEGYVELP-PIEGRSPRSPRNNPVPP 787 PG G GAPG ++G G P P+ R R P P Sbjct: 255 GIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLP 314 Query: 788 EAKSPVLNPGERPADVSPTSPQPEG 812 A N G R +D P P P G Sbjct: 315 GAAGARGNDGARGSDGQPGPPGPPG 339 Score = 40.8 bits (94), Expect = 0.006 Identities = 85/354 (24%), Positives = 108/354 (30%), Gaps = 76/354 (21%) Query: 549 PSGPDTTPAASDLPTEQPPSPQPGPPAASHTP----------------EKQASSFDF-NG 591 P GP P +P PG P + +P Q S+D +G Sbjct: 104 PQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSG 163 Query: 592 PYLGPPHSRSLPDILGQPEPPQEGGSQKSP-PPGSLEYLCLPAGGQVQLVPLAQAMGPGQ 650 +G P G P PP G+ P PGS Y P PGQ Sbjct: 164 VAVG--GLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPG-------------EPGQ 208 Query: 651 AVEVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASG 710 A G +G P GP+ PA G+ + +P G G+ Sbjct: 209 A---------GPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGF 259 Query: 711 YVSSADLVFTPNSGASSVSLVPSL----GLPSDQTPSLCPGLASGPPGAPG-------PV 759 F +G + P L GLP + PG GP GAPG P Sbjct: 260 PGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENG---APG-PMGPRGAPGERGRPGLPG 315 Query: 760 KSGFEGYVELPPIEGR----SPRSPRNNPVPPEAK---SPVLNPGERPADVSPTSPQPEG 812 +G G +G+ P P P AK P +PG A P P+G Sbjct: 316 AAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQG 375 Query: 813 LLVLQQVGDYCFLPGLGPGPLSLRSKPSSPGP-GPE-IKNLDQAFQVKKPPGQA 864 Q PGP + P G GP I + PPG A Sbjct: 376 HAGAQG----------PPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPA 419 Score = 39.3 bits (90), Expect = 0.017 Identities = 69/280 (24%), Positives = 78/280 (27%), Gaps = 77/280 (27%) Query: 491 SAELWPPGSMS----AFTSGSPPHQG-PWGSRFPELEGVFPVGFGD--SEVSPLTIEDPK 543 S E PPG A T+G P G P P +G P G GD SP P Sbjct: 989 SGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGS-PGGKGDRGENGSPGAPGAPG 1047 Query: 544 HVCDP-PSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSL 602 H P P GP P+ PGP + P Q D G R Sbjct: 1048 HPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGD-----KGETGERGA 1102 Query: 603 PDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGA 662 I G P G+ SP P QGA Sbjct: 1103 AGIKGHRGFPGNPGAPGSPGPAG---------------------------------QQGA 1129 Query: 663 AGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPN 722 GSP GP P+ P G P+ P G+ + G Sbjct: 1130 IGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEG------------- 1176 Query: 723 SGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSG 762 S G P P GPPGAPGP G Sbjct: 1177 ----------SPGHPGQPGP-------PGPPGAPGPCCGG 1199 Score = 37.4 bits (85), Expect = 0.063 Identities = 105/426 (24%), Positives = 134/426 (31%), Gaps = 91/426 (21%) Query: 496 PPGSMSAFTS-GSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDT 554 PPG+ S GSP +QGP G + P P P SGP Sbjct: 184 PPGTSGHPGSPGSPGYQGPPGE--------------PGQAGPSGPPGPPGAIGP-SGPAG 228 Query: 555 TPAASDLPTEQPPSPQPGPPAASHTPE-------KQASSFDFNGPYLGPPHSRSLPDILG 607 S P PGPP K FD G P + G Sbjct: 229 KDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRN---GEKGETGAPGLKG 285 Query: 608 QPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPS 667 + P E G+ PG + P G + PG R + GA GS Sbjct: 286 ENGLPGENGA-----PGPMG----PRGAP------GERGRPGLPGAAGARGNDGARGSDG 330 Query: 668 LESGGGPAPPALGPRVGGQDQKDSPVAIPMSS---GDTEDPGV-----ASGYVSSADLVF 719 GP A P G + P P S+ G +PG A G + Sbjct: 331 QPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGING 390 Query: 720 TPNS----GASSVSLVPSL----GLPSDQTPSLCPGL--ASGPPGAPG----PVKSGFEG 765 +P G + + P L G P + PGL +G PG G P G G Sbjct: 391 SPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERG 450 Query: 766 YVELPPIEGR--------SPRSPRNNPVPPEA-----------KSPVLNPGERPADVSPT 806 +P + G SP P N +P A P PGE+ Sbjct: 451 EAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERG 510 Query: 807 SPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSP-GPGPEIKNLDQAFQVKK----PP 861 +P P G +PG GPG +R P SP GPG + K Q + PP Sbjct: 511 APGPAGPRGAAGEPGRDGVPG-GPG---MRGMPGSPGGPGSDGKPGPPGSQGESGRPGPP 566 Query: 862 GQAVPQ 867 G + P+ Sbjct: 567 GPSGPR 572 Score = 35.8 bits (81), Expect = 0.18 Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 26/124 (20%) Query: 732 PSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSPRNNPVPPEAKS 791 P+ +P + ++CP PP AP P G+ P+ P+ +P PP Sbjct: 75 PNPEIPFGECCAVCPQ----PPTAP------------TRPPNGQGPQGPKGDPGPPGIPG 118 Query: 792 PVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLP---------GLGPGPLSLRSKPSSP 842 +PG SP SP P G+ G + P G+ G L+ P+ P Sbjct: 119 RNGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGP 178 Query: 843 GPGP 846 PGP Sbjct: 179 -PGP 181 >gi|110832843 TBP-associated factor 4 [Homo sapiens] Length = 1085 Score = 66.2 bits (160), Expect = 1e-10 Identities = 92/382 (24%), Positives = 130/382 (34%), Gaps = 61/382 (15%) Query: 498 GSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTTPA 557 GS+ + + S H R PE+ G+ VS P PA Sbjct: 27 GSLESQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSG----------SPAGAAGAGPA 76 Query: 558 ASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGS 617 A P E P P PP A GP P S P + P PP + Sbjct: 77 A---PAEGAPGAAPEPPPAGRARPGGG------GPQRPGPPSPRRPLVPAGPAPP---AA 124 Query: 618 QKSPPPGSLEYLCLPAGGQVQLVPLAQAM--GPGQAVEVERRPSQGAAGSPSLESGGGPA 675 + PPP C P VP A A+ GP A +P+ AA + G GP Sbjct: 125 KLRPPPEGSAGSCAP-------VPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPG 177 Query: 676 P-PALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSL 734 P P GP G + P A +G + + + ++A V N+G +++ +P Sbjct: 178 PGPGPGP---GPGKPAGPGAAQTLNGSA---ALLNSHHAAAPAVSLVNNGPAALLPLPKP 231 Query: 735 GLPSD--QTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSPRNNPVPPEAKSP 792 P QTP A P AP P + P +P P PP A + Sbjct: 232 AAPGTVIQTPPFVGAAAPPAPAAPSPPAA---------PAPAAPAAAP---PPPPPAPAT 279 Query: 793 VLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGP---GPLSLRSKP------SSPG 843 + P PA +P Q G P P GP + +P ++P Sbjct: 280 LARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPA 339 Query: 844 PGPEIKNLDQAFQVKKPPGQAV 865 PG + ++ + Q P Q + Sbjct: 340 PGVKAESPKRVVQAAPPAAQTL 361 Score = 48.5 bits (114), Expect = 3e-05 Identities = 73/282 (25%), Positives = 105/282 (37%), Gaps = 29/282 (10%) Query: 548 PPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILG 607 PP+ +P A+ P +P P PPA + G GPP + + Sbjct: 249 PPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPP-------GHPAGPP---TAAPAVP 298 Query: 608 QPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVE--RRPSQGAAGS 665 P Q GGS P PAG Q P A A P V+ E +R Q A + Sbjct: 299 PPAAAQNGGS-AGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPA 357 Query: 666 PSLESGGGPAPPA----LGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTP 721 + GPA A +GP + G + V P T P A+G V+ + L TP Sbjct: 358 AQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQS-LSRTP 416 Query: 722 NSGASSV--SLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFE-GYVELPPIEGRSPR 778 + S + +L P++ P P P PG V E G + + P + + Sbjct: 417 TATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQM 476 Query: 779 SPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVG 820 + + P +P RPA +PTS P + +Q G Sbjct: 477 QAQAHAQPQTTMAP------RPA--TPTSAPPVQISTVQAPG 510 >gi|19924099 synapsin I isoform Ia [Homo sapiens] Length = 705 Score = 66.2 bits (160), Expect = 1e-10 Identities = 78/277 (28%), Positives = 96/277 (34%), Gaps = 47/277 (16%) Query: 549 PSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGP--------YLGPPHSR 600 P G T+ + P +Q P PQ GPP P++Q P LGPP Sbjct: 443 PLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGS 502 Query: 601 SLPDILGQP-EPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPS 659 LP L P PQ+ SQ +PP G Q P+A G A PS Sbjct: 503 PLPQRLPSPTSAPQQPASQAAPP---------TQGQGRQSRPVAGGPGAPPAARPPASPS 553 Query: 660 -QGAAGSPSL---ESGGGPAPP-ALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSS 714 Q AG P S GPAPP A G GGQ ++ P P +G Sbjct: 554 PQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAG-------------- 599 Query: 715 ADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEG 774 P AS VP G P+ Q P GP G P P + PP Sbjct: 600 ------PTRQASQAGPVPRTGPPTTQQPR---PSGPGPAGRPKPQLAQKPSQDVPPPATA 650 Query: 775 RSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPE 811 + P ++ + N E PA P+ Q E Sbjct: 651 AAGGPPHPQLNKSQSLTNAFNLPE-PAPPRPSLSQDE 686 >gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] Length = 1838 Score = 65.1 bits (157), Expect = 3e-10 Identities = 95/367 (25%), Positives = 126/367 (34%), Gaps = 41/367 (11%) Query: 547 DPPSGP--DTTPAASDLPTEQP-PSPQPGPPAAS----HTPEKQASSFDFNGPYLGPPHS 599 D P+GP + P PT P P PGPP H ++ + F GPP Sbjct: 939 DGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGV 998 Query: 600 RSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPS 659 G+ P E G P P + L AG + A PG+ R Sbjct: 999 VGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGF 1058 Query: 660 QGAAGSPSL---------ESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASG 710 G G P E GP PA P G P+ IP G PG A Sbjct: 1059 PGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGE 1118 Query: 711 YVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELP 770 + + P A L +GLP +GP G PG + G +G + P Sbjct: 1119 KGAPGEK--GPQGPAGRDGLQGPVGLPG----------PAGPVGPPG--EDGDKGEIGEP 1164 Query: 771 PIEG-RSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLG 829 +G + + + P P + P+ PG AD P +GL + PG Sbjct: 1165 GQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPG-P 1223 Query: 830 PGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDYLSLPPWE 889 PGP+ L+ P PG E ++ Q PPG P+ P D PP Sbjct: 1224 PGPVGLQGLPGPPGEKGETGDVGQ----MGPPGPPGPRGP-----SGAPGADGPQGPPGG 1274 Query: 890 VNKPGEV 896 + PG V Sbjct: 1275 IGNPGAV 1281 Score = 61.6 bits (148), Expect = 3e-09 Identities = 108/402 (26%), Positives = 131/402 (32%), Gaps = 104/402 (25%) Query: 496 PPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSG---- 551 PPG A G+P +GP G P G D P+ + P PP Sbjct: 1112 PPGP--AGEKGAPGEKGPQG----------PAG-RDGLQGPVGLPGPAGPVGPPGEDGDK 1158 Query: 552 -----PDTTPAASDLPTEQPPSP--------QPGPPAASHTPEKQASSFDFN-----GP- 592 P + D + PP P QPGP A P + F GP Sbjct: 1159 GEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPR 1218 Query: 593 -YLGPPHSRSLPDILGQPEPPQEGGS--QKSPP--PGSLEYLCLPAGGQVQLVPLAQAMG 647 + GPP L + G P E G Q PP PG P+G P G Sbjct: 1219 GFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRG----PSGAPGADGPQGPPGG 1274 Query: 648 PGQAVEVERRPSQGAAGSPSLESGGGPAPP--------------ALGPR-----VGGQDQ 688 G V + G AG P L GGP P A GP G Sbjct: 1275 IGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGP 1334 Query: 689 KDSP--VAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCP 746 K SP V P G +PG A D G + S G + PS P Sbjct: 1335 KGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTG-----SPGPTGEPGPSGPP 1389 Query: 747 GLASGPPGAPGPV-KSGFEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSP 805 G GPPG GP + G +G +EG PP P+ G +P Sbjct: 1390 G-KRGPPGPAGPEGRQGEKGAKGEAGLEG-----------PPGKTGPIGPQG------AP 1431 Query: 806 TSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSPGP-GP 846 P P+GL + PGP+ + P SPGP GP Sbjct: 1432 GKPGPDGLRGI-------------PGPVGEQGLPGSPGPDGP 1460 Score = 54.7 bits (130), Expect = 4e-07 Identities = 94/374 (25%), Positives = 123/374 (32%), Gaps = 63/374 (16%) Query: 540 EDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPA---ASHTPEKQASSFDFN--GPYL 594 E+P DP +G + + +D P+P PG A E+ + D N PY Sbjct: 362 ENPDQPTDPGAGAEIPTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYY 421 Query: 595 GPPHSRS------------LPDILGQP--EPPQEG-------GSQKSPPPGSLEYLCLPA 633 P S S + + +G P E Q+G G PPG LP Sbjct: 422 DPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLP- 480 Query: 634 GGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPS---------LESGGGPAPPALGPRVG 684 G + P Q PG+ R GA G P GGG + GP V Sbjct: 481 GPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVS 540 Query: 685 GQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGA-----SSVSLVPSLGLPSD 739 Q+ + + + + P G V P SG V G+ Sbjct: 541 AQESQAQAI-LQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGP 599 Query: 740 QTPSLCPGL--------ASGPPGAPGPV-KSGFEGYVELPPIEG-RSPRSPRNNPVPPEA 789 P+ PG A G PG GP GF+G LP +G R P P PP Sbjct: 600 PGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGD 659 Query: 790 KSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSPGPGPEIK 849 + GE P P P GLL + P PGP + PGP + Sbjct: 660 DGERGDDGEVGPRGLPGEPGPRGLLGPKG-------PPGPPGPPGVTGMDGQPGPKGNVG 712 Query: 850 NLDQAFQVKKPPGQ 863 + PPGQ Sbjct: 713 PQGE----PGPPGQ 722 Score = 49.3 bits (116), Expect = 2e-05 Identities = 111/388 (28%), Positives = 131/388 (33%), Gaps = 58/388 (14%) Query: 505 SGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTT-------PA 557 SG P G G R + E V P G E P + PK PP P T P Sbjct: 651 SGPPGPPGDDGERGDDGE-VGPRGL-PGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPK 708 Query: 558 ASDLPTEQPPSP-QPGPPAASHTPEKQASSFD--FNGPYLGPPHSRSLPDILGQPE---- 610 + P +P P Q G P A P Q + GP LG P +P G P Sbjct: 709 GNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGP-LGKPGLPGMPGADGPPGHPGK 767 Query: 611 --PPQEGGSQKSP-PPGSLEYLCLPAG--GQVQLVPLAQAMG-------PGQAVEVERRP 658 PP E G Q P P G + Y P G G + L G PG ++ + Sbjct: 768 EGPPGEKGGQGPPGPQGPIGYPG-PRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKG 826 Query: 659 SQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYV------ 712 +G G P GP P GG + P+ P G PG+ GY Sbjct: 827 DRGEIGPPGPRGEDGPEGP---KGRGGPNGDPGPLGPPGEKGKLGVPGL-PGYPGRQGPK 882 Query: 713 -SSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGP---PGAPGPV-KSGFEGYV 767 S F +G P P Q P GP G PGP SG +G Sbjct: 883 GSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPA 942 Query: 768 ELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPG 827 PP E R P P+ P K P PG D P P G Q PG Sbjct: 943 G-PPGE-RGPNGPQGPTGFPGPKGP---PGPPGKDGLPGHPGQRGETGFQGKTGPPGPPG 997 Query: 828 -LGP-------GPLSLRSKPSSPGPGPE 847 +GP GP+ R P PGP E Sbjct: 998 VVGPQGPTGETGPMGERGHPGPPGPPGE 1025 Score = 44.7 bits (104), Expect = 4e-04 Identities = 78/311 (25%), Positives = 94/311 (30%), Gaps = 56/311 (18%) Query: 506 GSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPS--GPDTTPAASDLPT 563 G PP GP G R + E P P PP GP +P P Sbjct: 1299 GGPP--GPKGERGEK-----------GESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPG 1345 Query: 564 EQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGSQKSPPP 623 + P +PGP P + G P P G+P P G + P P Sbjct: 1346 DPGPPGEPGPAGQDGPPGDKGDD--------GEPGQTGSPGPTGEPGPSGPPGKRGPPGP 1397 Query: 624 GSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPS---LESGGGPAPPALG 680 P G Q + +A G + QGA G P L GP Sbjct: 1398 AG------PEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGL 1451 Query: 681 PRVGGQDQKDSPVAIPMSSGDTEDPGVAS--GYVSSADLVFTPNSGASSVSLVPSLGLPS 738 P G D P+ P G D G G+ L+ P GLP Sbjct: 1452 PGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEK----GDRGLPG 1507 Query: 739 DQTPSLCPGLAS-----------GPPGAPGPVKSGFEGYVELPPIEGRSPRSPRNNPVPP 787 Q S G GPPG PGP G +G G P+ +P PP Sbjct: 1508 PQGSSGPKGEQGITGPSGPIGPPGPPGLPGP--PGPKGAKGSSGPTG--PKGEAGHPGPP 1563 Query: 788 EAKSPVLNPGE 798 P PGE Sbjct: 1564 GPPGP---PGE 1571 Score = 35.0 bits (79), Expect = 0.31 Identities = 64/300 (21%), Positives = 102/300 (34%), Gaps = 67/300 (22%) Query: 552 PDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPP-------------- 597 PD A D P Q P+P + + ++ + PY P Sbjct: 242 PDCDTAVPDTPQSQDPNPDEYYTEG----DGEGETYYYEYPYYEDPEDLGKEPTPSKKPV 297 Query: 598 ----HSRSLPDIL------GQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMG 647 + +P+ L P P G+ K G +Y +P+ P + Sbjct: 298 EAAKETTEVPEELTPTPTEAAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPY-DDLT 356 Query: 648 PGQAVEVERRPSQGAAG------SPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGD 701 G+ E +P+ AG + + PAPP P G D + G+ Sbjct: 357 YGEGEENPDQPTDPGAGAEIPTSTADTSNSSNPAPP---PGEGADDLE----------GE 403 Query: 702 TEDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLA-----SGPPGAP 756 + + + + D + P S S + G+P++Q ++ G+ G G P Sbjct: 404 FTEETIRNLDENYYDPYYDPTSSPSEI----GPGMPANQ-DTIYEGIGGPRGEKGQKGEP 458 Query: 757 GPVKSGFEGYVELPPIEGRSPRSPRNNPVPPEAKSP---VLNPGERPADVSPTSPQPEGL 813 ++ G +E PP P P P PP P V +PGER P P +GL Sbjct: 459 AIIEPGM--LIEGPP----GPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGL 512 >gi|116284398 WAS/WASL interacting protein family, member 1 [Homo sapiens] Length = 503 Score = 65.1 bits (157), Expect = 3e-10 Identities = 98/398 (24%), Positives = 129/398 (32%), Gaps = 75/398 (18%) Query: 481 PSKSHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRF--------PELEGVFPVGFGDS 532 P LFQ G +L + + GS P P G R P G FPV Sbjct: 98 PGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGH 157 Query: 533 EVSPLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGP 592 P +P+ PP PD +P P +P+ P Sbjct: 158 RSGP---PEPQRNRMPPPRPDVGSKPDSIPPPVPSTPR---------------------P 193 Query: 593 YLGPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAV 652 PH+R P + G P P G +PPP GG ++ PL+ + Sbjct: 194 IQSSPHNRGSPPVPGGPRQPSPG---PTPPPFPGNRGTALGGGSIRQSPLSSSS------ 244 Query: 653 EVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYV 712 RP S +L+ P PP +G R + A+P P V S Sbjct: 245 PFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHRE-----AVPPPPPQNNKPPVPSTPR 299 Query: 713 SSADLVFTPNSGASSVSLVPSLGLPS---DQTPSLCP---GLASGPPGAPGPVKSGFEGY 766 SA P S P L S D+TP L L+S P P P +SG Sbjct: 300 PSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSG---- 355 Query: 767 VELPPIEGRSPRSP------RNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVG 820 LPP P P R+ P+PP R +P P G+ Sbjct: 356 -PLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGV------- 407 Query: 821 DYCFLPGLGPGPLSLRSKPS--SPGPGPEIKNLDQAFQ 856 P GP P +PS +P P P ++ FQ Sbjct: 408 ---DSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQ 442 Score = 39.3 bits (90), Expect = 0.017 Identities = 54/216 (25%), Positives = 70/216 (32%), Gaps = 49/216 (22%) Query: 496 PPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTT 555 PP A PP P G+R + + P + P P T Sbjct: 253 PPTPSRALDDKPPPPPPPVGNR--------------PSIHREAVPPPPPQNNKPPVPSTP 298 Query: 556 --PAASDLPTEQPPSPQPGPP----------AASHTPEKQAS---------SFDFNGPYL 594 A+S P PP +PGPP P++ S S +GP Sbjct: 299 RPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLP 358 Query: 595 GPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLE---YLCLPAGGQVQLVPLAQAMGPGQA 651 PP R P + +PP G PPP S LPA QL + P Sbjct: 359 PPPSERPPPPV---RDPPGRSGPLPPPPPVSRNGSTSRALPA--TPQLPSRSGVDSPRSG 413 Query: 652 VEVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQD 687 P + +AG+P P PP+ R G QD Sbjct: 414 PRPPLPPDRPSAGAPP------PPPPSTSIRNGFQD 443 >gi|38373695 WAS/WASL interacting protein family, member 1 [Homo sapiens] Length = 503 Score = 65.1 bits (157), Expect = 3e-10 Identities = 98/398 (24%), Positives = 129/398 (32%), Gaps = 75/398 (18%) Query: 481 PSKSHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRF--------PELEGVFPVGFGDS 532 P LFQ G +L + + GS P P G R P G FPV Sbjct: 98 PGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGH 157 Query: 533 EVSPLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGP 592 P +P+ PP PD +P P +P+ P Sbjct: 158 RSGP---PEPQRNRMPPPRPDVGSKPDSIPPPVPSTPR---------------------P 193 Query: 593 YLGPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAV 652 PH+R P + G P P G +PPP GG ++ PL+ + Sbjct: 194 IQSSPHNRGSPPVPGGPRQPSPG---PTPPPFPGNRGTALGGGSIRQSPLSSSS------ 244 Query: 653 EVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYV 712 RP S +L+ P PP +G R + A+P P V S Sbjct: 245 PFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHRE-----AVPPPPPQNNKPPVPSTPR 299 Query: 713 SSADLVFTPNSGASSVSLVPSLGLPS---DQTPSLCP---GLASGPPGAPGPVKSGFEGY 766 SA P S P L S D+TP L L+S P P P +SG Sbjct: 300 PSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSG---- 355 Query: 767 VELPPIEGRSPRSP------RNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVG 820 LPP P P R+ P+PP R +P P G+ Sbjct: 356 -PLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGV------- 407 Query: 821 DYCFLPGLGPGPLSLRSKPS--SPGPGPEIKNLDQAFQ 856 P GP P +PS +P P P ++ FQ Sbjct: 408 ---DSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQ 442 Score = 39.3 bits (90), Expect = 0.017 Identities = 54/216 (25%), Positives = 70/216 (32%), Gaps = 49/216 (22%) Query: 496 PPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTT 555 PP A PP P G+R + + P + P P T Sbjct: 253 PPTPSRALDDKPPPPPPPVGNR--------------PSIHREAVPPPPPQNNKPPVPSTP 298 Query: 556 --PAASDLPTEQPPSPQPGPP----------AASHTPEKQAS---------SFDFNGPYL 594 A+S P PP +PGPP P++ S S +GP Sbjct: 299 RPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLP 358 Query: 595 GPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLE---YLCLPAGGQVQLVPLAQAMGPGQA 651 PP R P + +PP G PPP S LPA QL + P Sbjct: 359 PPPSERPPPPV---RDPPGRSGPLPPPPPVSRNGSTSRALPA--TPQLPSRSGVDSPRSG 413 Query: 652 VEVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQD 687 P + +AG+P P PP+ R G QD Sbjct: 414 PRPPLPPDRPSAGAPP------PPPPSTSIRNGFQD 443 >gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] Length = 416 Score = 64.3 bits (155), Expect = 5e-10 Identities = 96/357 (26%), Positives = 117/357 (32%), Gaps = 41/357 (11%) Query: 542 PKHVCDPPSGPDTTPAASDLPTEQPP----SPQPGPPAASHTPEKQASSFDFNGPYLGPP 597 P+ PP P P + PP PQ PP + P+ GP Sbjct: 47 PQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD 106 Query: 598 HSRSLPDILGQPE-PPQEGGSQKS---PPPGSLEYLCLPAGGQVQ-LVPLAQAMGPGQAV 652 SRS G+P+ PP +GG+Q PPPG + G + Q P + GP Sbjct: 107 KSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 166 Query: 653 EVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTED----PGVA 708 + + R S+ G P GP P G P P G+ PG Sbjct: 167 DNKSRSSRSPPGKPQ-----GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP 221 Query: 709 SGYVSSAD-LVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPP--GAPGPVKSGFEG 765 G D + S P G Q P PG GPP G P G Sbjct: 222 QGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 281 Query: 766 YVELPPIEG----RSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGD 821 + PP +G RS RSP P P + G P P P P+G Q Sbjct: 282 KPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPP 341 Query: 822 YCFLPGLGPGP--------LSLRSKPSSP-GPGPEIKNLDQAFQVKKPPGQAVPQVP 869 PG GP S RS P P GP + N Q PP PQ P Sbjct: 342 ----PGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQG---PPPPAGGNPQQP 391 >gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo sapiens] Length = 1818 Score = 63.2 bits (152), Expect = 1e-09 Identities = 98/376 (26%), Positives = 135/376 (35%), Gaps = 58/376 (15%) Query: 504 TSGSPPHQGPWGSRFPE-LEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTTPAASDLP 562 TSG GP G R P+ +G PVGF PK PP G D P Sbjct: 917 TSGGDGPPGPPGERGPQGPQG--PVGF----------PGPKGPPGPP-GKDGLPGHPGQR 963 Query: 563 TEQPPSPQPGPPAASHTPEKQASSFDFNGPY--------LGPPHSRSLPDILGQPEPPQE 614 E + GPP Q + + GP GPP + LP G+ Sbjct: 964 GETGFQGKTGPPGPGGVVGPQGPTGE-TGPIGERGHPGPPGPPGEQGLPGAAGKE----- 1017 Query: 615 GGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGGGP 674 G++ P P + PAG ++ P + + PG +QGA G E GP Sbjct: 1018 -GAKGDPGPQGISGKDGPAG--LRGFPGERGL-PG---------AQGAPGLKGGEGPQGP 1064 Query: 675 APPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSL 734 P P G P+ +P G PG A + + P A + + Sbjct: 1065 PGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEK--GPQGPAGRDGVQGPV 1122 Query: 735 GLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEG-RSPRSPRNNPVPPEAKSPV 793 GLP +GP G+PG + G +G + P +G + + P PP + PV Sbjct: 1123 GLPG----------PAGPAGSPG--EDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPV 1170 Query: 794 LNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSPGPGPEIKNLDQ 853 PG D P +G+ + PG PGP+ L+ P PG E ++ Sbjct: 1171 GAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPG-PPGPIGLQGLPGPPGEKGENGDVG- 1228 Query: 854 AFQVKKPPGQAVPQVP 869 PPG PQ P Sbjct: 1229 PMGPPGPPGPRGPQGP 1244 Score = 50.8 bits (120), Expect = 6e-06 Identities = 88/333 (26%), Positives = 112/333 (33%), Gaps = 43/333 (12%) Query: 496 PPGSMSAFTS-GSPPHQGPWGSRFPELEGVFPVGFGD----SEVSPLTIEDPKHVCDPPS 550 PPGS+ + G G G+ P E G+ E P P PP Sbjct: 1253 PPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPG 1312 Query: 551 --GPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQ 608 GP P P + P +PGP + D P GPP G Sbjct: 1313 DDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQP--GPPGPSGEA---GP 1367 Query: 609 PEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSL 668 P PP + G PPG+ G Q + +A G + QG AG P Sbjct: 1368 PGPPGKRG-----PPGAAG----AEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGP 1418 Query: 669 ESGGGPAPPALG----PRVGGQDQKDSPVAIPMSSGDTEDPGV--ASGYVSSADLVFTPN 722 E G P +G P GQD P+ P G DPG G+ L+ P Sbjct: 1419 EGLRG-IPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPG 1477 Query: 723 SGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSPRN 782 GLP Q PG A G G PGP +G G P + G P+ P+ Sbjct: 1478 EQGEK----GDRGLPGTQG---SPG-AKGDGGIPGP--AGPLGPPGPPGLPG--PQGPKG 1525 Query: 783 NPVPPEAKSPVLNPGERPADVSPTSPQPEGLLV 815 N + P G+ P SP P G ++ Sbjct: 1526 N---KGSTGPAGQKGDSGLPGPPGSPGPPGEVI 1555 Score = 47.4 bits (111), Expect = 6e-05 Identities = 87/347 (25%), Positives = 111/347 (31%), Gaps = 80/347 (23%) Query: 539 IEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPH 598 + +P + + P GP P Q P+ PG P GPP Sbjct: 445 VVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDR-----------------GPPG 487 Query: 599 SRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRP 658 LP G P PPG++ L GG G + + Sbjct: 488 RPGLPGADGLP-----------GPPGTMLMLPFRYGGD---------GSKGPTISAQEAQ 527 Query: 659 SQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSS---GDTEDPGVASGYVSSA 715 +Q + G P P L R G PV P SS G++ DPG Sbjct: 528 AQAILQQARIALRGPPGPMGLTGRPG-------PVGGPGSSGAKGESGDPG--------- 571 Query: 716 DLVFTPNSGASSVSLVPS-LGLPSDQTPSLCPGLASGPPGAPGPV-KSGFEGYVELPPIE 773 G V P G P + G G PG PG GF+G LP + Sbjct: 572 ------PQGPRGVQGPPGPTGKPGKRGRPGADG-GRGMPGEPGAKGDRGFDGLPGLPGDK 624 Query: 774 G-RSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLG--- 829 G R R P+ P PP GE P P GLL + PG+ Sbjct: 625 GHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVD 684 Query: 830 --PGP---LSLRSKPSSPG----PGPEIKNLDQAFQVKKPPGQAVPQ 867 PGP + + +P PG PGP+ L PPG+ PQ Sbjct: 685 GPPGPKGNMGPQGEPGPPGQQGNPGPQ--GLPGPQGPIGPPGEKGPQ 729 Score = 42.7 bits (99), Expect = 0.001 Identities = 82/326 (25%), Positives = 106/326 (32%), Gaps = 46/326 (14%) Query: 547 DPPSGPDTTPAASDLPTEQPP-------SPQPGPPAASHTPEKQASSFDFNGPYLGPPHS 599 D P+G P LP Q PQ GPP +P ++ S+ GP Sbjct: 1032 DGPAGLRGFPGERGLPGAQGAPGLKGGEGPQ-GPPGPVGSPGERGSAGT-----AGPIGL 1085 Query: 600 RSLPDILGQPEPPQEGGS--QKSPP-PGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVER 656 P G P P E G+ +K P P + + P G P G E+ Sbjct: 1086 PGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGE 1145 Query: 657 RPSQGAAGSPSLESGGGPAPPAL-----GPRVGGQDQKDSPVAIPMSSGDTEDPGVAS-- 709 +G+ G G P PP L P + G D + P G D G Sbjct: 1146 PGQKGSKGDKG--ENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFP 1203 Query: 710 ---GYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPS--LCPGLASGPPGAPGPVKSGFE 764 G + L P + + P +G P P P A GP G PG V S Sbjct: 1204 GPPGPIGLQGLPGPPGEKGENGDVGP-MGPPGPPGPRGPQGPNGADGPQGPPGSVGS--- 1259 Query: 765 GYVELPPIEGRSPRSPRNNPVPP---EAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGD 821 + + + NP PP P GE+ P + P G GD Sbjct: 1260 ----VGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPG--AKGPPGD 1313 Query: 822 YCFLPGLGPGPLSLRSKPSSPG-PGP 846 P PGP+ P PG PGP Sbjct: 1314 DG--PKGNPGPVGFPGDPGPPGEPGP 1337 Score = 41.2 bits (95), Expect = 0.004 Identities = 81/296 (27%), Positives = 101/296 (34%), Gaps = 42/296 (14%) Query: 595 GPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLP-AGGQVQLVPLAQAMGP-GQAV 652 GP LG P P G Q P GS + P A G+ +A GP GQ Sbjct: 838 GPSGQAGEKGKLGVPGLPGYPGRQG--PKGSTGFPGFPGANGEKGARGVAGKPGPRGQRG 895 Query: 653 EVERRPSQGA---AGSPSLE-SGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDP--- 705 R S+GA G P + + GG PP P G PV P G P Sbjct: 896 PTGPRGSRGARGPTGKPGPKGTSGGDGPPG-PPGERGPQGPQGPVGFPGPKGPPGPPGKD 954 Query: 706 GVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPG----PVKS 761 G+ + F +G V P+ +T + GPPG PG P + Sbjct: 955 GLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAA 1014 Query: 762 GFEGYVELPPIEGRSPRS--------PRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGL 813 G EG P +G S + P +P +P L GE P P P G Sbjct: 1015 GKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQG----PPGPVG- 1069 Query: 814 LVLQQVGDYCFLPGLGPGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVP 869 G+ GP L R P P PGP + K PG+ PQ P Sbjct: 1070 ----SPGERGSAGTAGPIGLPGRPGPQGP-PGPAGE--------KGAPGEKGPQGP 1112 Score = 38.5 bits (88), Expect = 0.028 Identities = 59/233 (25%), Positives = 82/233 (35%), Gaps = 29/233 (12%) Query: 548 PPSGPDTTPAASDL--PTEQPPSPQPGPPAASHTPEKQASSFDFNGPYL-GPPHSRS--- 601 P GP ++ A + P Q P GPP + P K+ G + G P ++ Sbjct: 554 PVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRG 613 Query: 602 ---LPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRP 658 LP + G E G Q P P + + G ++ P G + R Sbjct: 614 FDGLPGLPGDKGHRGERGPQGPPGPPGDDGM---RGEDGEIGPRGLPGEAGPRGLLGPRG 670 Query: 659 SQGAAGSPSLESGGGPAPPA--LGPR----VGGQDQKDSPVAIPMSSGDTEDPGVASGYV 712 + GA G P + GP P +GP+ GQ P +P G PG G Sbjct: 671 TPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPG-EKGPQ 729 Query: 713 SSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEG 765 L P + G P + S G A GPPG GP+ G+ G Sbjct: 730 GKPGLAGLPGADGPP-------GHPGKEGQSGEKG-ALGPPGPQGPI--GYPG 772 Score = 31.6 bits (70), Expect = 3.5 Identities = 93/390 (23%), Positives = 121/390 (31%), Gaps = 87/390 (22%) Query: 540 EDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHS 599 + P+ V PP GP P P PG P A K FD G Sbjct: 573 QGPRGVQGPP-GPTGKPGKRGRPGADGGRGMPGEPGA-----KGDRGFDGLPGLPGDKGH 626 Query: 600 RSLPDILGQPEPPQEGGSQ-------------KSPPPGSLEYLCLP-AGGQVQLVPLAQA 645 R G P PP + G + ++ P G L P A GQ + + Sbjct: 627 RGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGP 686 Query: 646 MGPGQAVEVERRPSQ-GAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTED 704 GP + + P G G+P + GP P P G K +P + G Sbjct: 687 PGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGH 746 Query: 705 PGVAS-----------------GY-----VSSADLV--FTPNSGASSVSLVP----SLGL 736 PG GY V AD V + G P +GL Sbjct: 747 PGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGL 806 Query: 737 -----------PSDQTPSLCPGLASGPPGAPGPV-KSGFEGYVELPPIEG----RSPRSP 780 P + P +GP G PGP ++G +G + +P + G + P+ Sbjct: 807 KGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGS 866 Query: 781 RNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGP-GPLSLRSKP 839 P P A GE+ A P P G Q G GP G R Sbjct: 867 TGFPGFPGAN------GEKGARGVAGKPGPRG-----QRGP------TGPRGSRGARGPT 909 Query: 840 SSPGPGPEIKNLDQAFQVKKPPGQAVPQVP 869 PGP K PPG+ PQ P Sbjct: 910 GKPGP----KGTSGGDGPPGPPGERGPQGP 935 >gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo sapiens] Length = 1767 Score = 63.2 bits (152), Expect = 1e-09 Identities = 98/376 (26%), Positives = 135/376 (35%), Gaps = 58/376 (15%) Query: 504 TSGSPPHQGPWGSRFPE-LEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTTPAASDLP 562 TSG GP G R P+ +G PVGF PK PP G D P Sbjct: 866 TSGGDGPPGPPGERGPQGPQG--PVGF----------PGPKGPPGPP-GKDGLPGHPGQR 912 Query: 563 TEQPPSPQPGPPAASHTPEKQASSFDFNGPY--------LGPPHSRSLPDILGQPEPPQE 614 E + GPP Q + + GP GPP + LP G+ Sbjct: 913 GETGFQGKTGPPGPGGVVGPQGPTGE-TGPIGERGHPGPPGPPGEQGLPGAAGKE----- 966 Query: 615 GGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGGGP 674 G++ P P + PAG ++ P + + PG +QGA G E GP Sbjct: 967 -GAKGDPGPQGISGKDGPAG--LRGFPGERGL-PG---------AQGAPGLKGGEGPQGP 1013 Query: 675 APPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSL 734 P P G P+ +P G PG A + + P A + + Sbjct: 1014 PGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEK--GPQGPAGRDGVQGPV 1071 Query: 735 GLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEG-RSPRSPRNNPVPPEAKSPV 793 GLP +GP G+PG + G +G + P +G + + P PP + PV Sbjct: 1072 GLPG----------PAGPAGSPG--EDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPV 1119 Query: 794 LNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSPGPGPEIKNLDQ 853 PG D P +G+ + PG PGP+ L+ P PG E ++ Sbjct: 1120 GAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPG-PPGPIGLQGLPGPPGEKGENGDVG- 1177 Query: 854 AFQVKKPPGQAVPQVP 869 PPG PQ P Sbjct: 1178 PMGPPGPPGPRGPQGP 1193 Score = 50.8 bits (120), Expect = 6e-06 Identities = 88/333 (26%), Positives = 112/333 (33%), Gaps = 43/333 (12%) Query: 496 PPGSMSAFTS-GSPPHQGPWGSRFPELEGVFPVGFGD----SEVSPLTIEDPKHVCDPPS 550 PPGS+ + G G G+ P E G+ E P P PP Sbjct: 1202 PPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPG 1261 Query: 551 --GPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQ 608 GP P P + P +PGP + D P GPP G Sbjct: 1262 DDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQP--GPPGPSGEA---GP 1316 Query: 609 PEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSL 668 P PP + G PPG+ G Q + +A G + QG AG P Sbjct: 1317 PGPPGKRG-----PPGAAG----AEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGP 1367 Query: 669 ESGGGPAPPALG----PRVGGQDQKDSPVAIPMSSGDTEDPGV--ASGYVSSADLVFTPN 722 E G P +G P GQD P+ P G DPG G+ L+ P Sbjct: 1368 EGLRG-IPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPG 1426 Query: 723 SGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSPRN 782 GLP Q PG A G G PGP +G G P + G P+ P+ Sbjct: 1427 EQGEK----GDRGLPGTQG---SPG-AKGDGGIPGP--AGPLGPPGPPGLPG--PQGPKG 1474 Query: 783 NPVPPEAKSPVLNPGERPADVSPTSPQPEGLLV 815 N + P G+ P SP P G ++ Sbjct: 1475 N---KGSTGPAGQKGDSGLPGPPGSPGPPGEVI 1504 Score = 47.4 bits (111), Expect = 6e-05 Identities = 87/347 (25%), Positives = 111/347 (31%), Gaps = 80/347 (23%) Query: 539 IEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPH 598 + +P + + P GP P Q P+ PG P GPP Sbjct: 394 VVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDR-----------------GPPG 436 Query: 599 SRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRP 658 LP G P PPG++ L GG G + + Sbjct: 437 RPGLPGADGLP-----------GPPGTMLMLPFRYGGD---------GSKGPTISAQEAQ 476 Query: 659 SQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSS---GDTEDPGVASGYVSSA 715 +Q + G P P L R G PV P SS G++ DPG Sbjct: 477 AQAILQQARIALRGPPGPMGLTGRPG-------PVGGPGSSGAKGESGDPG--------- 520 Query: 716 DLVFTPNSGASSVSLVPS-LGLPSDQTPSLCPGLASGPPGAPGPV-KSGFEGYVELPPIE 773 G V P G P + G G PG PG GF+G LP + Sbjct: 521 ------PQGPRGVQGPPGPTGKPGKRGRPGADG-GRGMPGEPGAKGDRGFDGLPGLPGDK 573 Query: 774 G-RSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLG--- 829 G R R P+ P PP GE P P GLL + PG+ Sbjct: 574 GHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVD 633 Query: 830 --PGP---LSLRSKPSSPG----PGPEIKNLDQAFQVKKPPGQAVPQ 867 PGP + + +P PG PGP+ L PPG+ PQ Sbjct: 634 GPPGPKGNMGPQGEPGPPGQQGNPGPQ--GLPGPQGPIGPPGEKGPQ 678 Score = 42.7 bits (99), Expect = 0.001 Identities = 82/326 (25%), Positives = 106/326 (32%), Gaps = 46/326 (14%) Query: 547 DPPSGPDTTPAASDLPTEQPP-------SPQPGPPAASHTPEKQASSFDFNGPYLGPPHS 599 D P+G P LP Q PQ GPP +P ++ S+ GP Sbjct: 981 DGPAGLRGFPGERGLPGAQGAPGLKGGEGPQ-GPPGPVGSPGERGSAGT-----AGPIGL 1034 Query: 600 RSLPDILGQPEPPQEGGS--QKSPP-PGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVER 656 P G P P E G+ +K P P + + P G P G E+ Sbjct: 1035 PGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGE 1094 Query: 657 RPSQGAAGSPSLESGGGPAPPAL-----GPRVGGQDQKDSPVAIPMSSGDTEDPGVAS-- 709 +G+ G G P PP L P + G D + P G D G Sbjct: 1095 PGQKGSKGDKG--ENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFP 1152 Query: 710 ---GYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPS--LCPGLASGPPGAPGPVKSGFE 764 G + L P + + P +G P P P A GP G PG V S Sbjct: 1153 GPPGPIGLQGLPGPPGEKGENGDVGP-MGPPGPPGPRGPQGPNGADGPQGPPGSVGS--- 1208 Query: 765 GYVELPPIEGRSPRSPRNNPVPP---EAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGD 821 + + + NP PP P GE+ P + P G GD Sbjct: 1209 ----VGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPG--AKGPPGD 1262 Query: 822 YCFLPGLGPGPLSLRSKPSSPG-PGP 846 P PGP+ P PG PGP Sbjct: 1263 DG--PKGNPGPVGFPGDPGPPGEPGP 1286 Score = 41.2 bits (95), Expect = 0.004 Identities = 81/296 (27%), Positives = 101/296 (34%), Gaps = 42/296 (14%) Query: 595 GPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLP-AGGQVQLVPLAQAMGP-GQAV 652 GP LG P P G Q P GS + P A G+ +A GP GQ Sbjct: 787 GPSGQAGEKGKLGVPGLPGYPGRQG--PKGSTGFPGFPGANGEKGARGVAGKPGPRGQRG 844 Query: 653 EVERRPSQGA---AGSPSLE-SGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDP--- 705 R S+GA G P + + GG PP P G PV P G P Sbjct: 845 PTGPRGSRGARGPTGKPGPKGTSGGDGPPG-PPGERGPQGPQGPVGFPGPKGPPGPPGKD 903 Query: 706 GVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPG----PVKS 761 G+ + F +G V P+ +T + GPPG PG P + Sbjct: 904 GLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAA 963 Query: 762 GFEGYVELPPIEGRSPRS--------PRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGL 813 G EG P +G S + P +P +P L GE P P P G Sbjct: 964 GKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQG----PPGPVG- 1018 Query: 814 LVLQQVGDYCFLPGLGPGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVP 869 G+ GP L R P P PGP + K PG+ PQ P Sbjct: 1019 ----SPGERGSAGTAGPIGLPGRPGPQGP-PGPAGE--------KGAPGEKGPQGP 1061 Score = 38.5 bits (88), Expect = 0.028 Identities = 59/233 (25%), Positives = 82/233 (35%), Gaps = 29/233 (12%) Query: 548 PPSGPDTTPAASDL--PTEQPPSPQPGPPAASHTPEKQASSFDFNGPYL-GPPHSRS--- 601 P GP ++ A + P Q P GPP + P K+ G + G P ++ Sbjct: 503 PVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRG 562 Query: 602 ---LPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRP 658 LP + G E G Q P P + + G ++ P G + R Sbjct: 563 FDGLPGLPGDKGHRGERGPQGPPGPPGDDGM---RGEDGEIGPRGLPGEAGPRGLLGPRG 619 Query: 659 SQGAAGSPSLESGGGPAPPA--LGPR----VGGQDQKDSPVAIPMSSGDTEDPGVASGYV 712 + GA G P + GP P +GP+ GQ P +P G PG G Sbjct: 620 TPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPG-EKGPQ 678 Query: 713 SSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEG 765 L P + G P + S G A GPPG GP+ G+ G Sbjct: 679 GKPGLAGLPGADGPP-------GHPGKEGQSGEKG-ALGPPGPQGPI--GYPG 721 Score = 31.6 bits (70), Expect = 3.5 Identities = 93/390 (23%), Positives = 121/390 (31%), Gaps = 87/390 (22%) Query: 540 EDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHS 599 + P+ V PP GP P P PG P A K FD G Sbjct: 522 QGPRGVQGPP-GPTGKPGKRGRPGADGGRGMPGEPGA-----KGDRGFDGLPGLPGDKGH 575 Query: 600 RSLPDILGQPEPPQEGGSQ-------------KSPPPGSLEYLCLP-AGGQVQLVPLAQA 645 R G P PP + G + ++ P G L P A GQ + + Sbjct: 576 RGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGP 635 Query: 646 MGPGQAVEVERRPSQ-GAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTED 704 GP + + P G G+P + GP P P G K +P + G Sbjct: 636 PGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGH 695 Query: 705 PGVAS-----------------GY-----VSSADLV--FTPNSGASSVSLVP----SLGL 736 PG GY V AD V + G P +GL Sbjct: 696 PGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGL 755 Query: 737 -----------PSDQTPSLCPGLASGPPGAPGPV-KSGFEGYVELPPIEG----RSPRSP 780 P + P +GP G PGP ++G +G + +P + G + P+ Sbjct: 756 KGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGS 815 Query: 781 RNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGP-GPLSLRSKP 839 P P A GE+ A P P G Q G GP G R Sbjct: 816 TGFPGFPGAN------GEKGARGVAGKPGPRG-----QRGP------TGPRGSRGARGPT 858 Query: 840 SSPGPGPEIKNLDQAFQVKKPPGQAVPQVP 869 PGP K PPG+ PQ P Sbjct: 859 GKPGP----KGTSGGDGPPGPPGERGPQGP 884 >gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo sapiens] Length = 1806 Score = 63.2 bits (152), Expect = 1e-09 Identities = 98/376 (26%), Positives = 135/376 (35%), Gaps = 58/376 (15%) Query: 504 TSGSPPHQGPWGSRFPE-LEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTTPAASDLP 562 TSG GP G R P+ +G PVGF PK PP G D P Sbjct: 905 TSGGDGPPGPPGERGPQGPQG--PVGF----------PGPKGPPGPP-GKDGLPGHPGQR 951 Query: 563 TEQPPSPQPGPPAASHTPEKQASSFDFNGPY--------LGPPHSRSLPDILGQPEPPQE 614 E + GPP Q + + GP GPP + LP G+ Sbjct: 952 GETGFQGKTGPPGPGGVVGPQGPTGE-TGPIGERGHPGPPGPPGEQGLPGAAGKE----- 1005 Query: 615 GGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGGGP 674 G++ P P + PAG ++ P + + PG +QGA G E GP Sbjct: 1006 -GAKGDPGPQGISGKDGPAG--LRGFPGERGL-PG---------AQGAPGLKGGEGPQGP 1052 Query: 675 APPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSL 734 P P G P+ +P G PG A + + P A + + Sbjct: 1053 PGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEK--GPQGPAGRDGVQGPV 1110 Query: 735 GLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEG-RSPRSPRNNPVPPEAKSPV 793 GLP +GP G+PG + G +G + P +G + + P PP + PV Sbjct: 1111 GLPG----------PAGPAGSPG--EDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPV 1158 Query: 794 LNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSPGPGPEIKNLDQ 853 PG D P +G+ + PG PGP+ L+ P PG E ++ Sbjct: 1159 GAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPG-PPGPIGLQGLPGPPGEKGENGDVG- 1216 Query: 854 AFQVKKPPGQAVPQVP 869 PPG PQ P Sbjct: 1217 PMGPPGPPGPRGPQGP 1232 Score = 50.8 bits (120), Expect = 6e-06 Identities = 88/333 (26%), Positives = 112/333 (33%), Gaps = 43/333 (12%) Query: 496 PPGSMSAFTS-GSPPHQGPWGSRFPELEGVFPVGFGD----SEVSPLTIEDPKHVCDPPS 550 PPGS+ + G G G+ P E G+ E P P PP Sbjct: 1241 PPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPG 1300 Query: 551 --GPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQ 608 GP P P + P +PGP + D P GPP G Sbjct: 1301 DDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQP--GPPGPSGEA---GP 1355 Query: 609 PEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSL 668 P PP + G PPG+ G Q + +A G + QG AG P Sbjct: 1356 PGPPGKRG-----PPGAAG----AEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGP 1406 Query: 669 ESGGGPAPPALG----PRVGGQDQKDSPVAIPMSSGDTEDPGV--ASGYVSSADLVFTPN 722 E G P +G P GQD P+ P G DPG G+ L+ P Sbjct: 1407 EGLRG-IPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPG 1465 Query: 723 SGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSPRN 782 GLP Q PG A G G PGP +G G P + G P+ P+ Sbjct: 1466 EQGEK----GDRGLPGTQG---SPG-AKGDGGIPGP--AGPLGPPGPPGLPG--PQGPKG 1513 Query: 783 NPVPPEAKSPVLNPGERPADVSPTSPQPEGLLV 815 N + P G+ P SP P G ++ Sbjct: 1514 N---KGSTGPAGQKGDSGLPGPPGSPGPPGEVI 1543 Score = 47.4 bits (111), Expect = 6e-05 Identities = 87/347 (25%), Positives = 111/347 (31%), Gaps = 80/347 (23%) Query: 539 IEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPH 598 + +P + + P GP P Q P+ PG P GPP Sbjct: 433 VVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDR-----------------GPPG 475 Query: 599 SRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRP 658 LP G P PPG++ L GG G + + Sbjct: 476 RPGLPGADGLP-----------GPPGTMLMLPFRYGGD---------GSKGPTISAQEAQ 515 Query: 659 SQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSS---GDTEDPGVASGYVSSA 715 +Q + G P P L R G PV P SS G++ DPG Sbjct: 516 AQAILQQARIALRGPPGPMGLTGRPG-------PVGGPGSSGAKGESGDPG--------- 559 Query: 716 DLVFTPNSGASSVSLVPS-LGLPSDQTPSLCPGLASGPPGAPGPV-KSGFEGYVELPPIE 773 G V P G P + G G PG PG GF+G LP + Sbjct: 560 ------PQGPRGVQGPPGPTGKPGKRGRPGADG-GRGMPGEPGAKGDRGFDGLPGLPGDK 612 Query: 774 G-RSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLG--- 829 G R R P+ P PP GE P P GLL + PG+ Sbjct: 613 GHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVD 672 Query: 830 --PGP---LSLRSKPSSPG----PGPEIKNLDQAFQVKKPPGQAVPQ 867 PGP + + +P PG PGP+ L PPG+ PQ Sbjct: 673 GPPGPKGNMGPQGEPGPPGQQGNPGPQ--GLPGPQGPIGPPGEKGPQ 717 Score = 42.7 bits (99), Expect = 0.001 Identities = 82/326 (25%), Positives = 106/326 (32%), Gaps = 46/326 (14%) Query: 547 DPPSGPDTTPAASDLPTEQPP-------SPQPGPPAASHTPEKQASSFDFNGPYLGPPHS 599 D P+G P LP Q PQ GPP +P ++ S+ GP Sbjct: 1020 DGPAGLRGFPGERGLPGAQGAPGLKGGEGPQ-GPPGPVGSPGERGSAGT-----AGPIGL 1073 Query: 600 RSLPDILGQPEPPQEGGS--QKSPP-PGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVER 656 P G P P E G+ +K P P + + P G P G E+ Sbjct: 1074 PGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGE 1133 Query: 657 RPSQGAAGSPSLESGGGPAPPAL-----GPRVGGQDQKDSPVAIPMSSGDTEDPGVAS-- 709 +G+ G G P PP L P + G D + P G D G Sbjct: 1134 PGQKGSKGDKG--ENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFP 1191 Query: 710 ---GYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPS--LCPGLASGPPGAPGPVKSGFE 764 G + L P + + P +G P P P A GP G PG V S Sbjct: 1192 GPPGPIGLQGLPGPPGEKGENGDVGP-MGPPGPPGPRGPQGPNGADGPQGPPGSVGS--- 1247 Query: 765 GYVELPPIEGRSPRSPRNNPVPP---EAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGD 821 + + + NP PP P GE+ P + P G GD Sbjct: 1248 ----VGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPG--AKGPPGD 1301 Query: 822 YCFLPGLGPGPLSLRSKPSSPG-PGP 846 P PGP+ P PG PGP Sbjct: 1302 DG--PKGNPGPVGFPGDPGPPGEPGP 1325 Score = 41.2 bits (95), Expect = 0.004 Identities = 81/296 (27%), Positives = 101/296 (34%), Gaps = 42/296 (14%) Query: 595 GPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLP-AGGQVQLVPLAQAMGP-GQAV 652 GP LG P P G Q P GS + P A G+ +A GP GQ Sbjct: 826 GPSGQAGEKGKLGVPGLPGYPGRQG--PKGSTGFPGFPGANGEKGARGVAGKPGPRGQRG 883 Query: 653 EVERRPSQGA---AGSPSLE-SGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDP--- 705 R S+GA G P + + GG PP P G PV P G P Sbjct: 884 PTGPRGSRGARGPTGKPGPKGTSGGDGPPG-PPGERGPQGPQGPVGFPGPKGPPGPPGKD 942 Query: 706 GVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPG----PVKS 761 G+ + F +G V P+ +T + GPPG PG P + Sbjct: 943 GLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAA 1002 Query: 762 GFEGYVELPPIEGRSPRS--------PRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGL 813 G EG P +G S + P +P +P L GE P P P G Sbjct: 1003 GKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQG----PPGPVG- 1057 Query: 814 LVLQQVGDYCFLPGLGPGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVP 869 G+ GP L R P P PGP + K PG+ PQ P Sbjct: 1058 ----SPGERGSAGTAGPIGLPGRPGPQGP-PGPAGE--------KGAPGEKGPQGP 1100 Score = 38.5 bits (88), Expect = 0.028 Identities = 59/233 (25%), Positives = 82/233 (35%), Gaps = 29/233 (12%) Query: 548 PPSGPDTTPAASDL--PTEQPPSPQPGPPAASHTPEKQASSFDFNGPYL-GPPHSRS--- 601 P GP ++ A + P Q P GPP + P K+ G + G P ++ Sbjct: 542 PVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRG 601 Query: 602 ---LPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRP 658 LP + G E G Q P P + + G ++ P G + R Sbjct: 602 FDGLPGLPGDKGHRGERGPQGPPGPPGDDGM---RGEDGEIGPRGLPGEAGPRGLLGPRG 658 Query: 659 SQGAAGSPSLESGGGPAPPA--LGPR----VGGQDQKDSPVAIPMSSGDTEDPGVASGYV 712 + GA G P + GP P +GP+ GQ P +P G PG G Sbjct: 659 TPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPG-EKGPQ 717 Query: 713 SSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEG 765 L P + G P + S G A GPPG GP+ G+ G Sbjct: 718 GKPGLAGLPGADGPP-------GHPGKEGQSGEKG-ALGPPGPQGPI--GYPG 760 Score = 31.6 bits (70), Expect = 3.5 Identities = 93/390 (23%), Positives = 121/390 (31%), Gaps = 87/390 (22%) Query: 540 EDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHS 599 + P+ V PP GP P P PG P A K FD G Sbjct: 561 QGPRGVQGPP-GPTGKPGKRGRPGADGGRGMPGEPGA-----KGDRGFDGLPGLPGDKGH 614 Query: 600 RSLPDILGQPEPPQEGGSQ-------------KSPPPGSLEYLCLP-AGGQVQLVPLAQA 645 R G P PP + G + ++ P G L P A GQ + + Sbjct: 615 RGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGP 674 Query: 646 MGPGQAVEVERRPSQ-GAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTED 704 GP + + P G G+P + GP P P G K +P + G Sbjct: 675 PGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGH 734 Query: 705 PGVAS-----------------GY-----VSSADLV--FTPNSGASSVSLVP----SLGL 736 PG GY V AD V + G P +GL Sbjct: 735 PGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGL 794 Query: 737 -----------PSDQTPSLCPGLASGPPGAPGPV-KSGFEGYVELPPIEG----RSPRSP 780 P + P +GP G PGP ++G +G + +P + G + P+ Sbjct: 795 KGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGS 854 Query: 781 RNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGP-GPLSLRSKP 839 P P A GE+ A P P G Q G GP G R Sbjct: 855 TGFPGFPGAN------GEKGARGVAGKPGPRG-----QRGP------TGPRGSRGARGPT 897 Query: 840 SSPGPGPEIKNLDQAFQVKKPPGQAVPQVP 869 PGP K PPG+ PQ P Sbjct: 898 GKPGP----KGTSGGDGPPGPPGERGPQGP 923 >gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo sapiens] Length = 1691 Score = 63.2 bits (152), Expect = 1e-09 Identities = 116/399 (29%), Positives = 143/399 (35%), Gaps = 56/399 (14%) Query: 478 IPNPSKSHLFQNGS-AELWPPGSMSAFTSGSPPHQG-PWGSRFPELEGVFPVGFGDSEVS 535 +P P K + NG + PPG G P G P P L G+ P GD Sbjct: 794 LPGP-KGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGI-PGEKGDPGPP 851 Query: 536 PLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQ-PGPPAASHTPEKQASSFDFNGPY- 593 L + P P P P P SP PG AS P + P Sbjct: 852 GLDVPGPPGERGSPGIPGAPG-----PIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGP 906 Query: 594 ---LGPPHSRSLPDILGQ---------PEPPQEGGSQKSP----PPGSLEYLCLPAGGQV 637 LG P +P + G P P E GS+ P PPG ++ L + G+ Sbjct: 907 PGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEK 966 Query: 638 Q---LVPLAQAMGPGQAVEVERRPSQ-GAAGSPSLESGGGPAPPALGPRVGGQDQKDSPV 693 L + GP + P Q G +G P L GP P P + GQ P Sbjct: 967 GEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLP---GPPGPKGNPGLPGQPGLIGPP 1023 Query: 694 AIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVP-SLGLPSDQTPSLCPGLAS-G 751 + + GD PG V P G S V P S GLP + PG++S G Sbjct: 1024 GLKGTIGDMGFPGPQG--------VEGP-PGPSGVPGQPGSPGLPGQKGDKGDPGISSIG 1074 Query: 752 PPGAPGPV-KSGFEGYVELPPIEGR--SPRSPRNNPVPPEAKSPVLNPGERPADVSPTSP 808 PG PGP + G GY P I+G P P P P AK PG P +P Sbjct: 1075 LPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLP-GLPGTPGAKGQPGLPG------FPGTP 1127 Query: 809 QPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSPGPGPE 847 P G + LPG PGP+ P PGP E Sbjct: 1128 GPPGPKGISGPPGNPGLPG-EPGPVGGGGHPGQPGPPGE 1165 Score = 53.5 bits (127), Expect = 8e-07 Identities = 126/488 (25%), Positives = 148/488 (30%), Gaps = 125/488 (25%) Query: 490 GSAELWPPGSMS-AFTSGSPPHQGPWGSRFPELEGVF----------PVGFGDSEVSPLT 538 G+A + PPG G +GP G P G+ P G + P Sbjct: 389 GAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPP-- 446 Query: 539 IEDPKHVCDP-PSGPDTTPAASDLPTEQP-------------------PSPQPGPPAASH 578 +C+P P GP +P L EQ P QPG P Sbjct: 447 ---SDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPG 503 Query: 579 TPEKQASSFDFNGP-----YLGPPHSRSLPDILGQPEPPQEGGSQKSP------------ 621 P S F G G + LP I G P P GS+ P Sbjct: 504 PP----GSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGD 559 Query: 622 -----PPGSLEYLCLPAG-GQVQLVPLAQAMG-PGQAVEVERRPSQGAAGSPSLESGGGP 674 PG+ LP GQ L L G PG R G G P L GP Sbjct: 560 KGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGP 619 Query: 675 -APPALGP-----RVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNS----- 723 PP GP G Q +P P G DPG L P Sbjct: 620 MGPPGFGPPGPVGEKGIQGVAGNP-GQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVG 678 Query: 724 -----------------GASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPG-PVKSGFEG 765 G+ +P +GLP P PG+ GPPGAPG P + G EG Sbjct: 679 LPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI-PGPPGAPGTPGRIGLEG 737 Query: 766 YVELPPIEGRSPR------SPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQ-Q 818 P G P P P K + G+R P P GL L Sbjct: 738 PPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGP 797 Query: 819 VGDY-----------CFLPGLG----PGPLSLRSKPSSPGP--GPEIKNLDQAFQVKKPP 861 GD LPG+G PGP P PGP P + + PP Sbjct: 798 KGDVGPNGQPGPMGPPGLPGIGVQGPPGP------PGIPGPIGQPGLHGIPGEKGDPGPP 851 Query: 862 GQAVPQVP 869 G VP P Sbjct: 852 GLDVPGPP 859 Score = 53.1 bits (126), Expect = 1e-06 Identities = 114/445 (25%), Positives = 147/445 (33%), Gaps = 104/445 (23%) Query: 496 PPGSMSAF-TSGSPPHQGPWGSR-------FPELEGVFPVGFGDSEVSPLTIEDPKHVCD 547 PPG G P GP G R FP G+ + D P I C+ Sbjct: 70 PPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPG----CN 125 Query: 548 PPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGP-----YLGPPHSRSL 602 G P + P Q P PG P P S GP Y GPP + L Sbjct: 126 GTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMS-SLPGPKGNPGYPGPPGIQGL 184 Query: 603 PDI------LGQPEPPQEGGSQKSP----PPGSLEYLCLPAGGQVQLVPLAQAMGPGQAV 652 P +G P PP G P P G++ G+ L GP + Sbjct: 185 PGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQI 244 Query: 653 EVERRP-----SQGAAGSPSLESGGGPAPPAL----GPRVG-----------------GQ 686 ++RP +G G P G P PP + GP G G+ Sbjct: 245 SEQKRPIDVEFQKGDQGLPG--DRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGK 302 Query: 687 DQKDSPVAIPMSSGDTEDPGVA-----------SGYVSSADLVFT-PNSGAS--SVSLVP 732 D ++ IP GD PG +G LV P +G + + Sbjct: 303 DGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIG 362 Query: 733 SLGLPSDQTPSLCPGLASGPPGAPGPVKS---------GFEG-------------YVELP 770 GLP ++ PG+ GPPG PGP + GF G + P Sbjct: 363 LPGLPGEKGERGFPGI-QGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGP 421 Query: 771 PIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPT----SPQPEGLLVLQQV----GDY 822 P P +P P PP P + P + + P SP +GL Q V GD Sbjct: 422 PGLDGQPGAP-GLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDT 480 Query: 823 CFLPGLGPGPLSLRSKPSSPG-PGP 846 CF +G G +P PG PGP Sbjct: 481 CF-NCIGTGISGPPGQPGLPGLPGP 504 Score = 51.2 bits (121), Expect = 4e-06 Identities = 101/379 (26%), Positives = 127/379 (33%), Gaps = 93/379 (24%) Query: 505 SGSPPHQGPWGSRF-PELEG----VFPVGFGDSEVSPLTIEDPKHVCDPP--SGPDTTPA 557 SG P GP G + P L G + P G + + + P+ V PP SG P Sbjct: 996 SGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGT-IGDMGFPGPQGVEGPPGPSGVPGQPG 1054 Query: 558 ASDLPTEQP-----------------PSPQPGPPAASHTPEKQASSFDFNGPYL-GPPHS 599 + LP ++ P +PG P P + S D P L G P + Sbjct: 1055 SPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGA 1114 Query: 600 RSLPDILGQPEPPQEGGSQK-SPPPGS--LEYLCLPAGG---QVQLVPLAQAMGPGQAVE 653 + P + G P P G + S PPG+ L P GG Q P + PGQ Sbjct: 1115 KGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGI 1174 Query: 654 VERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVS 713 +G G P G P PP L P + GQ GD PG+ Sbjct: 1175 PGPAGQKGEPGQPGF---GNPGPPGL-PGLSGQ------------KGDGGLPGIPG---- 1214 Query: 714 SADLVFTPNSGASSVSLVPSL-GLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPI 772 N G P G P Q P GPPG+PGP G +G Sbjct: 1215 --------NPGLPGPKGEPGFHGFPGVQGPP-------GPPGSPGPALEGPKG------- 1252 Query: 773 EGRSPRSPRNNPVP------PEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLP 826 P+ P P P P + P PG +P GL LP Sbjct: 1253 -NPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGL---------PGLP 1302 Query: 827 GL--GPGPLSLRSKPSSPG 843 GL GP L+ P PG Sbjct: 1303 GLKGDQGPPGLQGNPGRPG 1321 Score = 45.1 bits (105), Expect = 3e-04 Identities = 81/306 (26%), Positives = 97/306 (31%), Gaps = 88/306 (28%) Query: 551 GPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPE 610 GP P P Q P PGPP + GP L P P G P Sbjct: 1220 GPKGEPGFHGFPGVQGP---PGPPGSP-------------GPALEGPKGNPGPQ--GPPG 1261 Query: 611 PPQEGGSQKSP----PPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSP 666 P G Q P PPG LP G ++ + PGQ +G G P Sbjct: 1262 RPGPTGFQGLPGPEGPPG------LPGNGGIK----GEKGNPGQPGLPGLPGLKGDQGPP 1311 Query: 667 SLESGGGPAPPALG--------PRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLV 718 L+ G P P L P V G P +P S+G +PG L+ Sbjct: 1312 GLQ--GNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPG----------LI 1359 Query: 719 FTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPR 778 P GLP S+ +GPPG PG + G +G LP P+ Sbjct: 1360 GPPGPP----------GLPGPSGQSIIIKGDAGPPGIPG--QPGLKG---LP-----GPQ 1399 Query: 779 SPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSK 838 P+ P P P P GL G PGL PG R Sbjct: 1400 GPQGLPGPTG---------------PPGDPGRNGLPGFDGAGGRKGDPGL-PGQPGTRGL 1443 Query: 839 PSSPGP 844 PGP Sbjct: 1444 DGPPGP 1449 Score = 35.0 bits (79), Expect = 0.31 Identities = 26/79 (32%), Positives = 28/79 (35%), Gaps = 2/79 (2%) Query: 549 PSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQA-SSFDFNGPYLGPPHSRSLPDILG 607 P G P LP Q P PGP P + FD G G P P G Sbjct: 1383 PPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRG 1442 Query: 608 QPEPPQEGGSQKSP-PPGS 625 PP G Q P PPG+ Sbjct: 1443 LDGPPGPDGLQGPPGPPGT 1461 >gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sapiens] Length = 1685 Score = 63.2 bits (152), Expect = 1e-09 Identities = 116/399 (29%), Positives = 143/399 (35%), Gaps = 56/399 (14%) Query: 478 IPNPSKSHLFQNGS-AELWPPGSMSAFTSGSPPHQG-PWGSRFPELEGVFPVGFGDSEVS 535 +P P K + NG + PPG G P G P P L G+ P GD Sbjct: 794 LPGP-KGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGI-PGEKGDPGPP 851 Query: 536 PLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQ-PGPPAASHTPEKQASSFDFNGPY- 593 L + P P P P P SP PG AS P + P Sbjct: 852 GLDVPGPPGERGSPGIPGAPG-----PIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGP 906 Query: 594 ---LGPPHSRSLPDILGQ---------PEPPQEGGSQKSP----PPGSLEYLCLPAGGQV 637 LG P +P + G P P E GS+ P PPG ++ L + G+ Sbjct: 907 PGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEK 966 Query: 638 Q---LVPLAQAMGPGQAVEVERRPSQ-GAAGSPSLESGGGPAPPALGPRVGGQDQKDSPV 693 L + GP + P Q G +G P L GP P P + GQ P Sbjct: 967 GEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLP---GPPGPKGNPGLPGQPGLIGPP 1023 Query: 694 AIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVP-SLGLPSDQTPSLCPGLAS-G 751 + + GD PG V P G S V P S GLP + PG++S G Sbjct: 1024 GLKGTIGDMGFPGPQG--------VEGP-PGPSGVPGQPGSPGLPGQKGDKGDPGISSIG 1074 Query: 752 PPGAPGPV-KSGFEGYVELPPIEGR--SPRSPRNNPVPPEAKSPVLNPGERPADVSPTSP 808 PG PGP + G GY P I+G P P P P AK PG P +P Sbjct: 1075 LPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLP-GLPGTPGAKGQPGLPG------FPGTP 1127 Query: 809 QPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSPGPGPE 847 P G + LPG PGP+ P PGP E Sbjct: 1128 GPPGPKGISGPPGNPGLPG-EPGPVGGGGHPGQPGPPGE 1165 Score = 53.9 bits (128), Expect = 7e-07 Identities = 100/373 (26%), Positives = 126/373 (33%), Gaps = 87/373 (23%) Query: 505 SGSPPHQGPWGSRF-PELEG----VFPVGFGDSEVSPLTIEDPKHVCDPP--SGPDTTPA 557 SG P GP G + P L G + P G + + + P+ V PP SG P Sbjct: 996 SGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGT-IGDMGFPGPQGVEGPPGPSGVPGQPG 1054 Query: 558 ASDLPTEQP-----------------PSPQPGPPAASHTPEKQASSFDFNGPYL-GPPHS 599 + LP ++ P +PG P P + S D P L G P + Sbjct: 1055 SPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGA 1114 Query: 600 RSLPDILGQPEPPQEGGSQK-SPPPGS--LEYLCLPAGG---QVQLVPLAQAMGPGQAVE 653 + P + G P P G + S PPG+ L P GG Q P + PGQ Sbjct: 1115 KGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGI 1174 Query: 654 VERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVS 713 +G G P G P PP L P + GQ GD PG+ Sbjct: 1175 PGPAGQKGEPGQPGF---GNPGPPGL-PGLSGQ------------KGDGGLPGIPG---- 1214 Query: 714 SADLVFTPNSGASSVSLVPSL-GLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPI 772 N G P G P Q P GPPG+PGP G +G Sbjct: 1215 --------NPGLPGPKGEPGFHGFPGVQGPP-------GPPGSPGPALEGPKG------- 1252 Query: 773 EGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGL--GP 830 P+ P P P + P PG +P GL LPGL Sbjct: 1253 -NPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGL---------PGLPGLKGDQ 1302 Query: 831 GPLSLRSKPSSPG 843 GP L+ P PG Sbjct: 1303 GPPGLQGNPGRPG 1315 Score = 53.5 bits (127), Expect = 8e-07 Identities = 126/488 (25%), Positives = 148/488 (30%), Gaps = 125/488 (25%) Query: 490 GSAELWPPGSMS-AFTSGSPPHQGPWGSRFPELEGVF----------PVGFGDSEVSPLT 538 G+A + PPG G +GP G P G+ P G + P Sbjct: 389 GAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPP-- 446 Query: 539 IEDPKHVCDP-PSGPDTTPAASDLPTEQP-------------------PSPQPGPPAASH 578 +C+P P GP +P L EQ P QPG P Sbjct: 447 ---SDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPG 503 Query: 579 TPEKQASSFDFNGP-----YLGPPHSRSLPDILGQPEPPQEGGSQKSP------------ 621 P S F G G + LP I G P P GS+ P Sbjct: 504 PP----GSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGD 559 Query: 622 -----PPGSLEYLCLPAG-GQVQLVPLAQAMG-PGQAVEVERRPSQGAAGSPSLESGGGP 674 PG+ LP GQ L L G PG R G G P L GP Sbjct: 560 KGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGP 619 Query: 675 -APPALGP-----RVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNS----- 723 PP GP G Q +P P G DPG L P Sbjct: 620 MGPPGFGPPGPVGEKGIQGVAGNP-GQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVG 678 Query: 724 -----------------GASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPG-PVKSGFEG 765 G+ +P +GLP P PG+ GPPGAPG P + G EG Sbjct: 679 LPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI-PGPPGAPGTPGRIGLEG 737 Query: 766 YVELPPIEGRSPR------SPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQ-Q 818 P G P P P K + G+R P P GL L Sbjct: 738 PPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGP 797 Query: 819 VGDY-----------CFLPGLG----PGPLSLRSKPSSPGP--GPEIKNLDQAFQVKKPP 861 GD LPG+G PGP P PGP P + + PP Sbjct: 798 KGDVGPNGQPGPMGPPGLPGIGVQGPPGP------PGIPGPIGQPGLHGIPGEKGDPGPP 851 Query: 862 GQAVPQVP 869 G VP P Sbjct: 852 GLDVPGPP 859 Score = 53.1 bits (126), Expect = 1e-06 Identities = 114/445 (25%), Positives = 147/445 (33%), Gaps = 104/445 (23%) Query: 496 PPGSMSAF-TSGSPPHQGPWGSR-------FPELEGVFPVGFGDSEVSPLTIEDPKHVCD 547 PPG G P GP G R FP G+ + D P I C+ Sbjct: 70 PPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPG----CN 125 Query: 548 PPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGP-----YLGPPHSRSL 602 G P + P Q P PG P P S GP Y GPP + L Sbjct: 126 GTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMS-SLPGPKGNPGYPGPPGIQGL 184 Query: 603 PDI------LGQPEPPQEGGSQKSP----PPGSLEYLCLPAGGQVQLVPLAQAMGPGQAV 652 P +G P PP G P P G++ G+ L GP + Sbjct: 185 PGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQI 244 Query: 653 EVERRP-----SQGAAGSPSLESGGGPAPPAL----GPRVG-----------------GQ 686 ++RP +G G P G P PP + GP G G+ Sbjct: 245 SEQKRPIDVEFQKGDQGLPG--DRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGK 302 Query: 687 DQKDSPVAIPMSSGDTEDPGVA-----------SGYVSSADLVFT-PNSGAS--SVSLVP 732 D ++ IP GD PG +G LV P +G + + Sbjct: 303 DGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIG 362 Query: 733 SLGLPSDQTPSLCPGLASGPPGAPGPVKS---------GFEG-------------YVELP 770 GLP ++ PG+ GPPG PGP + GF G + P Sbjct: 363 LPGLPGEKGERGFPGI-QGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGP 421 Query: 771 PIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPT----SPQPEGLLVLQQV----GDY 822 P P +P P PP P + P + + P SP +GL Q V GD Sbjct: 422 PGLDGQPGAP-GLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDT 480 Query: 823 CFLPGLGPGPLSLRSKPSSPG-PGP 846 CF +G G +P PG PGP Sbjct: 481 CF-NCIGTGISGPPGQPGLPGLPGP 504 Score = 43.9 bits (102), Expect = 7e-04 Identities = 82/297 (27%), Positives = 95/297 (31%), Gaps = 76/297 (25%) Query: 551 GPDTTPAASDLPTEQ-PPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQP 609 GP P P Q PP P P A P+ GP GPP LP G P Sbjct: 1220 GPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNP------GPQ-GPPGRPGLPGPEGPP 1272 Query: 610 EPPQEGG--SQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPS 667 P GG +K P GQ L L PG + QG G P Sbjct: 1273 GLPGNGGIKGEKGNP------------GQPGLPGL-----PGLKGDQGPPGLQGNPGRPG 1315 Query: 668 LESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASS 727 L G P L P V G P +P S+G +PG L+ P Sbjct: 1316 LN--GMKGDPGL-PGVPGFPGMKGPSGVPGSAGPEGEPG----------LIGPPGPP--- 1359 Query: 728 VSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSPRNNPVPP 787 GLP S+ +GPPG PG + G +G LP P+ P+ P P Sbjct: 1360 -------GLPGPSGQSIIIKGDAGPPGIPG--QPGLKG---LP-----GPQGPQGLPGPT 1402 Query: 788 EAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSPGP 844 P P GL G PGL PG R PGP Sbjct: 1403 G---------------PPGDPGRNGLPGFDGAGGRKGDPGL-PGQPGTRGLDGPPGP 1443 Score = 35.0 bits (79), Expect = 0.31 Identities = 26/79 (32%), Positives = 28/79 (35%), Gaps = 2/79 (2%) Query: 549 PSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQA-SSFDFNGPYLGPPHSRSLPDILG 607 P G P LP Q P PGP P + FD G G P P G Sbjct: 1377 PPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRG 1436 Query: 608 QPEPPQEGGSQKSP-PPGS 625 PP G Q P PPG+ Sbjct: 1437 LDGPPGPDGLQGPPGPPGT 1455 >gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo sapiens] Length = 1688 Score = 63.2 bits (152), Expect = 1e-09 Identities = 116/399 (29%), Positives = 143/399 (35%), Gaps = 56/399 (14%) Query: 478 IPNPSKSHLFQNGS-AELWPPGSMSAFTSGSPPHQG-PWGSRFPELEGVFPVGFGDSEVS 535 +P P K + NG + PPG G P G P P L G+ P GD Sbjct: 794 LPGP-KGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGI-PGEKGDPGPP 851 Query: 536 PLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQ-PGPPAASHTPEKQASSFDFNGPY- 593 L + P P P P P SP PG AS P + P Sbjct: 852 GLDVPGPPGERGSPGIPGAPG-----PIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGP 906 Query: 594 ---LGPPHSRSLPDILGQ---------PEPPQEGGSQKSP----PPGSLEYLCLPAGGQV 637 LG P +P + G P P E GS+ P PPG ++ L + G+ Sbjct: 907 PGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEK 966 Query: 638 Q---LVPLAQAMGPGQAVEVERRPSQ-GAAGSPSLESGGGPAPPALGPRVGGQDQKDSPV 693 L + GP + P Q G +G P L GP P P + GQ P Sbjct: 967 GEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLP---GPPGPKGNPGLPGQPGLIGPP 1023 Query: 694 AIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVP-SLGLPSDQTPSLCPGLAS-G 751 + + GD PG V P G S V P S GLP + PG++S G Sbjct: 1024 GLKGTIGDMGFPGPQG--------VEGP-PGPSGVPGQPGSPGLPGQKGDKGDPGISSIG 1074 Query: 752 PPGAPGPV-KSGFEGYVELPPIEGR--SPRSPRNNPVPPEAKSPVLNPGERPADVSPTSP 808 PG PGP + G GY P I+G P P P P AK PG P +P Sbjct: 1075 LPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLP-GLPGTPGAKGQPGLPG------FPGTP 1127 Query: 809 QPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSPGPGPE 847 P G + LPG PGP+ P PGP E Sbjct: 1128 GPPGPKGISGPPGNPGLPG-EPGPVGGGGHPGQPGPPGE 1165 Score = 53.5 bits (127), Expect = 8e-07 Identities = 126/488 (25%), Positives = 148/488 (30%), Gaps = 125/488 (25%) Query: 490 GSAELWPPGSMS-AFTSGSPPHQGPWGSRFPELEGVF----------PVGFGDSEVSPLT 538 G+A + PPG G +GP G P G+ P G + P Sbjct: 389 GAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPP-- 446 Query: 539 IEDPKHVCDP-PSGPDTTPAASDLPTEQP-------------------PSPQPGPPAASH 578 +C+P P GP +P L EQ P QPG P Sbjct: 447 ---SDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPG 503 Query: 579 TPEKQASSFDFNGP-----YLGPPHSRSLPDILGQPEPPQEGGSQKSP------------ 621 P S F G G + LP I G P P GS+ P Sbjct: 504 PP----GSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGD 559 Query: 622 -----PPGSLEYLCLPAG-GQVQLVPLAQAMG-PGQAVEVERRPSQGAAGSPSLESGGGP 674 PG+ LP GQ L L G PG R G G P L GP Sbjct: 560 KGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGP 619 Query: 675 -APPALGP-----RVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNS----- 723 PP GP G Q +P P G DPG L P Sbjct: 620 MGPPGFGPPGPVGEKGIQGVAGNP-GQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVG 678 Query: 724 -----------------GASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPG-PVKSGFEG 765 G+ +P +GLP P PG+ GPPGAPG P + G EG Sbjct: 679 LPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI-PGPPGAPGTPGRIGLEG 737 Query: 766 YVELPPIEGRSPR------SPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQ-Q 818 P G P P P K + G+R P P GL L Sbjct: 738 PPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGP 797 Query: 819 VGDY-----------CFLPGLG----PGPLSLRSKPSSPGP--GPEIKNLDQAFQVKKPP 861 GD LPG+G PGP P PGP P + + PP Sbjct: 798 KGDVGPNGQPGPMGPPGLPGIGVQGPPGP------PGIPGPIGQPGLHGIPGEKGDPGPP 851 Query: 862 GQAVPQVP 869 G VP P Sbjct: 852 GLDVPGPP 859 Score = 53.1 bits (126), Expect = 1e-06 Identities = 114/445 (25%), Positives = 147/445 (33%), Gaps = 104/445 (23%) Query: 496 PPGSMSAF-TSGSPPHQGPWGSR-------FPELEGVFPVGFGDSEVSPLTIEDPKHVCD 547 PPG G P GP G R FP G+ + D P I C+ Sbjct: 70 PPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPG----CN 125 Query: 548 PPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGP-----YLGPPHSRSL 602 G P + P Q P PG P P S GP Y GPP + L Sbjct: 126 GTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMS-SLPGPKGNPGYPGPPGIQGL 184 Query: 603 PDI------LGQPEPPQEGGSQKSP----PPGSLEYLCLPAGGQVQLVPLAQAMGPGQAV 652 P +G P PP G P P G++ G+ L GP + Sbjct: 185 PGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQI 244 Query: 653 EVERRP-----SQGAAGSPSLESGGGPAPPAL----GPRVG-----------------GQ 686 ++RP +G G P G P PP + GP G G+ Sbjct: 245 SEQKRPIDVEFQKGDQGLPG--DRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGK 302 Query: 687 DQKDSPVAIPMSSGDTEDPGVA-----------SGYVSSADLVFT-PNSGAS--SVSLVP 732 D ++ IP GD PG +G LV P +G + + Sbjct: 303 DGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIG 362 Query: 733 SLGLPSDQTPSLCPGLASGPPGAPGPVKS---------GFEG-------------YVELP 770 GLP ++ PG+ GPPG PGP + GF G + P Sbjct: 363 LPGLPGEKGERGFPGI-QGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGP 421 Query: 771 PIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPT----SPQPEGLLVLQQV----GDY 822 P P +P P PP P + P + + P SP +GL Q V GD Sbjct: 422 PGLDGQPGAP-GLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDT 480 Query: 823 CFLPGLGPGPLSLRSKPSSPG-PGP 846 CF +G G +P PG PGP Sbjct: 481 CF-NCIGTGISGPPGQPGLPGLPGP 504 Score = 49.3 bits (116), Expect = 2e-05 Identities = 102/375 (27%), Positives = 129/375 (34%), Gaps = 88/375 (23%) Query: 505 SGSPPHQGPWGSRF-PELEG----VFPVGFGDSEVSPLTIEDPKHVCDPP--SGPDTTPA 557 SG P GP G + P L G + P G + + + P+ V PP SG P Sbjct: 996 SGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGT-IGDMGFPGPQGVEGPPGPSGVPGQPG 1054 Query: 558 ASDLPTEQP-----------------PSPQPGPPAASHTPEKQASSFDFNGPYL-GPPHS 599 + LP ++ P +PG P P + S D P L G P + Sbjct: 1055 SPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGA 1114 Query: 600 RSLPDILGQPEPPQEGGSQK-SPPPGS--LEYLCLPAGG---QVQLVPLAQAMGPGQAVE 653 + P + G P P G + S PPG+ L P GG Q P + PGQ Sbjct: 1115 KGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGI 1174 Query: 654 VERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVS 713 +G G P G P PP L P + GQ GD PG+ Sbjct: 1175 PGPAGQKGEPGQPGF---GNPGPPGL-PGLSGQ------------KGDGGLPGIPG---- 1214 Query: 714 SADLVFTPNSGASSVSLVPSL-GLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPI 772 N G P G P Q P GPPG+PGP G +G P Sbjct: 1215 --------NPGLPGPKGEPGFHGFPGVQGPP-------GPPGSPGPALEGPKGN---PGP 1256 Query: 773 EGRSPRSPRNNPVPPEAKSPVL--NPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGL-- 828 +G P P +P P L N G + +P P G LPGL Sbjct: 1257 QG-PPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPG------------LPGLKG 1303 Query: 829 GPGPLSLRSKPSSPG 843 GP L+ P PG Sbjct: 1304 DQGPPGLQGNPGRPG 1318 Score = 43.5 bits (101), Expect = 9e-04 Identities = 80/306 (26%), Positives = 96/306 (31%), Gaps = 91/306 (29%) Query: 551 GPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPE 610 GP P P Q P PGPP + GP L P G Sbjct: 1220 GPKGEPGFHGFPGVQGP---PGPPGSP-------------GPALEGPKGNP-----GPQG 1258 Query: 611 PPQEGGSQKSP----PPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSP 666 PP G Q P PPG LP G ++ + PGQ +G G P Sbjct: 1259 PPGRPGFQGLPGPEGPPG------LPGNGGIK----GEKGNPGQPGLPGLPGLKGDQGPP 1308 Query: 667 SLESGGGPAPPALG--------PRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLV 718 L+ G P P L P V G P +P S+G +PG L+ Sbjct: 1309 GLQ--GNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPG----------LI 1356 Query: 719 FTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPR 778 P GLP S+ +GPPG PG + G +G LP P+ Sbjct: 1357 GPPGPP----------GLPGPSGQSIIIKGDAGPPGIPG--QPGLKG---LP-----GPQ 1396 Query: 779 SPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSK 838 P+ P P P P GL G PGL PG R Sbjct: 1397 GPQGLPGPTG---------------PPGDPGRNGLPGFDGAGGRKGDPGL-PGQPGTRGL 1440 Query: 839 PSSPGP 844 PGP Sbjct: 1441 DGPPGP 1446 Score = 35.0 bits (79), Expect = 0.31 Identities = 26/79 (32%), Positives = 28/79 (35%), Gaps = 2/79 (2%) Query: 549 PSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQA-SSFDFNGPYLGPPHSRSLPDILG 607 P G P LP Q P PGP P + FD G G P P G Sbjct: 1380 PPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRG 1439 Query: 608 QPEPPQEGGSQKSP-PPGS 625 PP G Q P PPG+ Sbjct: 1440 LDGPPGPDGLQGPPGPPGT 1458 >gi|146219843 Snf2-related CBP activator protein [Homo sapiens] Length = 3230 Score = 62.8 bits (151), Expect = 1e-09 Identities = 87/310 (28%), Positives = 112/310 (36%), Gaps = 41/310 (13%) Query: 535 SPLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYL 594 +PLTI P HV P + P + P P S P +S +SS + P Sbjct: 1393 APLTISSPLHV------PSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTT 1446 Query: 595 GP-PHSRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVE 653 P P S L + P G P L + P V P ++ P A Sbjct: 1447 LPAPASAPLTIPISAPLTVSASG------PALLTSVTPPLAPVVPAAPGPPSLAPSGASP 1500 Query: 654 VERRPSQGAAGSPSLESGGGPAPPAL----GPRVGGQDQ----KDSPVAIPMSSGDTEDP 705 + G A +PSL S P P L V G + SPV +P S+ + P Sbjct: 1501 SASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFP 1560 Query: 706 GVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEG 765 + + A L+ P S AS P + + QT L P A PP AP PV Sbjct: 1561 SAPNPAPAQASLL-APASSASQALATPLAPMAAPQTAILAPSPA--PPLAPLPV------ 1611 Query: 766 YVELPPIEGRSP-RSPRNNPVPPEAKSPVLNPGERPADVSPT-SPQPEGLLVLQQVGDYC 823 L P G +P + PVP +P PG A SP +P P VL Sbjct: 1612 ---LAPSPGAAPVLASSQTPVP--VMAPSSTPGTSLASASPVPAPTP----VLAPSSTQT 1662 Query: 824 FLPGLGPGPL 833 LP P PL Sbjct: 1663 MLPAPVPSPL 1672 Score = 50.4 bits (119), Expect = 7e-06 Identities = 96/386 (24%), Positives = 134/386 (34%), Gaps = 78/386 (20%) Query: 497 PGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTTP 556 P S+ T G P P S P L +S V+P C P P Sbjct: 1513 PSLSSSQTPGHPLLLAPTSSHVPGL---------NSTVAP--------ACSPVLVP---- 1551 Query: 557 AASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGG 616 AS L + P +P P P AS ++S P L P + + P PP Sbjct: 1552 -ASALASPFPSAPNPAPAQASLLAPASSASQALATP-LAPMAAPQTAILAPSPAPPLAPL 1609 Query: 617 SQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAV-EVERRPSQGAAGSPSLESGGGPA 675 +P PG+ L A Q + +A + PG ++ P+ +PS PA Sbjct: 1610 PVLAPSPGAAPVL---ASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPA 1666 Query: 676 P-----------------PALGPRVGGQDQKDSPVAIPMSSGDTEDPGVAS--GYVSSAD 716 P PAL P +GG + + + +G+ + P ++ Sbjct: 1667 PVPSPLPSPASTQTLALAPALAPTLGGSSPSQT---LSLGTGNPQGPFPTQTLSLTPASS 1723 Query: 717 LVFTPNSGASSVSLVPSLGLPSDQTPSLCPG--LASGPPGAPGPVKSGFEGYVELPPIEG 774 LV TP A ++SL P L QT SL P LA P P P + + L P Sbjct: 1724 LVPTP---AQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHT-----LTLAPASS 1775 Query: 775 R----SPRSPRNNPVPPEAKSPVLNPGERP----ADVSPTSPQPEGLLVLQQVGDYCFLP 826 +P S + + P A P L P A S SP + ++ LP Sbjct: 1776 SASLLAPASVQTLTLSP-APVPTLGPAAAQTLALAPASTQSPASQASSLVVSASGAAPLP 1834 Query: 827 GL----------GPGPLSLRSKPSSP 842 P L+LRS P SP Sbjct: 1835 VTMVSRLPVSKDEPDTLTLRSGPPSP 1860 Score = 45.4 bits (106), Expect = 2e-04 Identities = 92/346 (26%), Positives = 120/346 (34%), Gaps = 72/346 (20%) Query: 530 GDSEVSPLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQP-------GPPAASHTPEK 582 G S S + P V P S PA P P S Q P +P + Sbjct: 1639 GTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQ 1698 Query: 583 QASSFDFN--GPYLGPPHSRSL-PDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQL 639 S N GP+ P + SL P P P Q PP G + L L Sbjct: 1699 TLSLGTGNPQGPF--PTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAP---- 1752 Query: 640 VPLAQA--MGPGQAVEVERRPSQGAAGSPSLESGG----GPAP-PALGPRVGGQDQKDSP 692 PLA A +GP A + P+ +A + S PAP P LGP Sbjct: 1753 -PLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAAAQ------- 1804 Query: 693 VAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASS--VSLVPSLGLPSDQTPSLCPGLAS 750 + ++ T+ P S A + SGA+ V++V L + D+ +L L S Sbjct: 1805 -TLALAPASTQSPA------SQASSLVVSASGAAPLPVTMVSRLPVSKDEPDTLT--LRS 1855 Query: 751 GPPGAPGPVKSGFEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQP 810 GPP P S F G PR PR P PP +SP S + Sbjct: 1856 GPPSPPSTATS-FGG-----------PR-PRRQP-PPPPRSPFYLDSLEEKRKRQRSERL 1901 Query: 811 EGLLVLQ------------QVGDYCFLPGLGPGPLSLRSKPSSPGP 844 E + L +V D+C LP P+ P SPGP Sbjct: 1902 ERIFQLSEAHGALAPVYGTEVLDFCTLPQPVASPIG----PRSPGP 1943 Score = 38.5 bits (88), Expect = 0.028 Identities = 83/324 (25%), Positives = 116/324 (35%), Gaps = 57/324 (17%) Query: 532 SEVSPLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNG 591 S +P+TI P H+ P P P S PP+ P PPA + P + + Sbjct: 2469 SAPNPITIL-PVHILPSPPPPSQIPPCSSPACTPPPACTP-PPAHTPPPAQTCLVTPSSP 2526 Query: 592 PYLGPPH---SRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAG--------GQVQLV 640 LGPP S S+ ++ P E +Q P SLE + + L+ Sbjct: 2527 LLLGPPSVPISASVTNLPLGLRPEAELCAQALASPESLELASVASSETSSLSLVPPKDLL 2586 Query: 641 PLAQAMGPGQAVEVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSG 700 P+A + P + PS A S +LE+G P GQ+Q+ P S+ Sbjct: 2587 PVAVEILPVSEKNLSLTPS---APSLTLEAGSIP---------NGQEQE-----APDSAE 2629 Query: 701 DTEDPGVASG-----YVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGA 755 T + G VS ++ + P S AS L L +D+T A P + Sbjct: 2630 GTTLTVLPEGEELPLCVSESNGLELPPSAASDEPLQEP--LEADRTSEELTE-AKTPTSS 2686 Query: 756 PGPVKSGFEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLV 815 P E EL E +P + + PE SP P R + Q G Sbjct: 2687 P-------EKPQELVTAEVAAPSTSSSATSSPEGPSPARPPRRRTSADVEIRGQGTG--- 2736 Query: 816 LQQVGDYCFLPGLGPGPLSLRSKP 839 PG PGP LR P Sbjct: 2737 ---------RPGQPPGPKVLRKLP 2751 Score = 32.0 bits (71), Expect = 2.6 Identities = 103/427 (24%), Positives = 141/427 (33%), Gaps = 130/427 (30%) Query: 548 PPSGPDTT------PAASDLPTEQPPSPQP-GPPA--ASHTPEKQASSFDFNGPYLGPP- 597 PP GP+ + P LP S P GPP AS P GP L PP Sbjct: 1026 PPPGPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPASRPP----------GPVLLPPL 1075 Query: 598 --HSRSLPDILG-------------------QPEPPQEGGSQKSPPPGS---LEYLCLPA 633 +S SLP +L +P PP +PPPGS L+ L +P Sbjct: 1076 QPNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLTVPP 1135 Query: 634 G------------------------------GQVQLVPLAQAMGP-------GQAVEVER 656 G ++ L P QA P GQ + + Sbjct: 1136 GYTFPPAAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSGEVVSIGQLASLAQ 1195 Query: 657 RPSQGAAGSPSLE----------SGGGPAPPALG-PR-----------VGGQD---QKDS 691 RP A GS L +G A+G PR GGQ + + Sbjct: 1196 RPVANAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHLISQPA 1255 Query: 692 PVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASG 751 VA+ + T P S SS TP++ + L SL L ++Q P P + + Sbjct: 1256 HVALIQAVAPTPGPTPVSVLPSS-----TPSTTPAPTGL--SLPLAANQVP---PTMVNN 1305 Query: 752 PPGAPGPVKSG-FEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPT--SP 808 V+ +G +PP+ +PR P + P L PG P T +P Sbjct: 1306 TGVVKIVVRQAPRDGLTPVPPL-APAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAP 1364 Query: 809 QPEGLLV------LQQVGDYCFLPGLGPGPLSLRSK---PSS-PGPGPEIKNLDQAFQVK 858 P LV + G PL++ S PSS PGP + + + Sbjct: 1365 MPTPTLVRPLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLA 1424 Query: 859 KPPGQAV 865 P V Sbjct: 1425 SPVSSTV 1431 Score = 31.6 bits (70), Expect = 3.5 Identities = 42/175 (24%), Positives = 60/175 (34%), Gaps = 26/175 (14%) Query: 717 LVFTPNSGASSVSLVPSLG--LPSDQTPSLCPGL-------ASGPPGAPGPVKSGFEGYV 767 +V P + V + P G L + TP P + ++ P G P S G V Sbjct: 1011 VVNNPRAPLGPVPVRPPPGPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPASRPPGPV 1070 Query: 768 ELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFL-- 825 LPP++ S P+ P P S P + PT P P L G L Sbjct: 1071 LLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKP 1130 Query: 826 ----PGLGPGPLSLRSKPS-----------SPGPGPEIKNLDQAFQVKKPPGQAV 865 PG P + + + +P P P+ L Q + P G+ V Sbjct: 1131 LTVPPGYTFPPAAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSGEVV 1185 >gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 1124 Score = 62.4 bits (150), Expect = 2e-09 Identities = 113/414 (27%), Positives = 151/414 (36%), Gaps = 60/414 (14%) Query: 493 ELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGP 552 ++ PP +A G P P + P PV D+ +PL PPS P Sbjct: 284 QVTPPRKDAAPALG-PLSSSPLATPSPSGTKARPVPPPDNAATPLP------ATLPPSPP 336 Query: 553 DTTPAASDLPT-EQPPSPQ--PGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQP 609 TP P+ PPS Q P PPA TP QA P PP +++P I P Sbjct: 337 LATPLPLAPPSPSAPPSLQTLPSPPA---TPPSQAPPSMTTPPMQAPPSLQTIPPI-QVP 392 Query: 610 EPPQEGGSQKSPPP---GSLEYLCLPAGGQVQLVPLAQAMGPGQ---AVEVERRPSQGAA 663 Q P P SL+ +Q M P Q ++ RP+ Sbjct: 393 HSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPP 452 Query: 664 GSPSLESG-GGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPN 722 SP L++ PA P L + SP P+SS T P A ++S +P Sbjct: 453 DSPPLQAPLSLPASPPLQTSL-------SPAVSPLSSPLTIHPLQALSSLAS----HSPQ 501 Query: 723 SGASSVSLVP-----SLGLPSDQTPS---LCPGLASGPPGAPGPVKSG----FEGYVELP 770 + SS+ + P SL PS QTP P L + P AP P+++ ++E P Sbjct: 502 APLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETP 561 Query: 771 PIEG----RSPRSPRNNPVPPEAKSPVLNP--------GERPADVSPTSPQPEGLLVLQQ 818 P ++P SP P PPE S + P P P+ P Q Sbjct: 562 PCPAPCPLQAPPSPLTTP-PPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQ 620 Query: 819 VGDYCFLPGLGPGPLSLRSKPSSP--GPGPEIKNLDQAFQVKKPPGQAVPQVPV 870 LP L P S P SP P P+ N A + + P P PV Sbjct: 621 APPXLALPPLQAPPSPPASPPLSPLATPSPQAPNA-LAVHLLQAPFSPPPSPPV 673 Score = 58.9 bits (141), Expect = 2e-08 Identities = 96/372 (25%), Positives = 131/372 (35%), Gaps = 59/372 (15%) Query: 496 PPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTT 555 PP SPP P + P+ V + SP + PP+ P + Sbjct: 628 PPLQAPPSPPASPP-LSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS 686 Query: 556 PAASD----------LPTEQPPSPQPGPP-AASHTPEKQASSFDFNGPYLGPPHSRSLPD 604 P+A+ P + PPSP PP + S TP QA P + P Sbjct: 687 PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA------------PPPLAAPP 734 Query: 605 ILGQPEPPQEGGSQKS--PPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGA 662 + P PP S PPP L P +Q+ P A P + + A Sbjct: 735 LQVPPSPPASPPMSPSATPPPRVPPLLAAP---PLQVPPSPPASLPMSPLAKPPPQAPPA 791 Query: 663 AGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPN 722 +P L++ P+PPA P GQ ++PMS T P V +A L+ P Sbjct: 792 LATPPLQA--LPSPPASFP---GQAPFSPSASLPMSPLATPPPQAPP--VLAAPLLQVPP 844 Query: 723 SGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSPRN 782 S +S +L P+ + G APGP PP RSP S + Sbjct: 845 SPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGP-----------PPPPSRSPSSTLS 893 Query: 783 NP-VPPEAKSPVLNPGE-RPADVSP-----TSPQPEGLLVLQQVGDYCFLPGLGPG-PLS 834 P + + S P E R D P SP P+ L + GP PL+ Sbjct: 894 GPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAW----SRGPAPPLA 949 Query: 835 LRSKPSSPGPGP 846 R P +P P P Sbjct: 950 FRGAPGAPLPWP 961 Score = 51.2 bits (121), Expect = 4e-06 Identities = 93/388 (23%), Positives = 132/388 (34%), Gaps = 64/388 (16%) Query: 555 TPAAS--DLPTEQPP-SPQPGPP-------------AASHTPEKQ------ASSFDFNGP 592 TPAA L T +PP SP+P PP A P + ++ + P Sbjct: 16 TPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAP 75 Query: 593 YLGPPHSRSLPDILGQPEPPQEGGSQKSPP-----------PGSLEYLCLPA--GGQVQL 639 GP S PP G +++PP PG P G + Sbjct: 76 RAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLR 135 Query: 640 VPLAQAMGPGQAVEVERRP--SQGAAGSPSLESGGGPAPP------ALGPRVGGQDQKDS 691 + + + G+A E +R S GA S + G P+P A G VG S Sbjct: 136 ISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPS 195 Query: 692 PVAIPMSSGDTEDPGVASGYVSS--ADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPG-- 747 P + G + AS + ++ + S + S L S TP P Sbjct: 196 ARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS 255 Query: 748 --LASGPPGAPG-PVKSGFEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVS 804 A G P AP P + +G L P + PR + P + SP+ P Sbjct: 256 GPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKAR 315 Query: 805 PTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQA 864 P P L LP P L P SP P ++ L PP QA Sbjct: 316 PVPPPDNAATPLPAT-----LPPSPPLATPLPLAPPSPSAPPSLQTLPS--PPATPPSQA 368 Query: 865 VPQV--PVIQLFKALKQQDYLSLPPWEV 890 P + P +Q +L+ ++PP +V Sbjct: 369 PPSMTTPPMQAPPSLQ-----TIPPIQV 391 >gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 preproprotein [Homo sapiens] Length = 331 Score = 62.4 bits (150), Expect = 2e-09 Identities = 79/287 (27%), Positives = 101/287 (35%), Gaps = 23/287 (8%) Query: 540 EDPKHVCDPPSGPDTTPAASDLPTEQPP---SPQPGPPAASHTPEKQASSFDFNGPYLGP 596 E P + P GP +P + P PP PQ PP + P+ GP Sbjct: 27 ESPSLIAGNPQGP--SPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 84 Query: 597 PHSRSLPDILGQPE-PPQEGGSQKS---PPPGSLEYLCLPAGGQVQ-LVPLAQAMGPGQA 651 SRS G+P+ PP +GG+Q PPPG + G + Q P + GP Sbjct: 85 DKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQ 144 Query: 652 VEVERRPSQ--GAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVAS 709 + R P G P + G P P P G+ Q P G PG Sbjct: 145 GDKSRSPRSPPGKPQGPPPQGGNQPQGP---PPPPGKPQGPPPQGGKKPQG-PPPPGKPQ 200 Query: 710 GYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPP--GAPGPVKSGFEGYV 767 G D + S P G Q P PG GPP G P G Sbjct: 201 GPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP 260 Query: 768 ELPPIEG----RSPRSPRNNPV-PPEAKSPVLNPGERPADVSPTSPQ 809 + PP +G +S RSP P PP+ + PA +P PQ Sbjct: 261 QGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQ 307 Score = 55.8 bits (133), Expect = 2e-07 Identities = 72/242 (29%), Positives = 84/242 (34%), Gaps = 15/242 (6%) Query: 637 VQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIP 696 V L+ L+ A + V E PS AG+P S G P P G+ Q P Sbjct: 8 VALLALSSAQNLNEDVSQEESPSL-IAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGN 66 Query: 697 MSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPP--G 754 G PG G D +P S P G Q P PG GPP G Sbjct: 67 KPQGPPP-PGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG 125 Query: 755 APGPVKSGFEGYVELPPIEG---RSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPE 811 P G + PP +G RSPRSP P P + G P P P P+ Sbjct: 126 GNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ 185 Query: 812 GLLVLQ---QVGDYCFLPGLGPGPLSLRSKPSSP-GPGPEIKNLDQAFQVKKPPGQAVPQ 867 G Q G P G S +S P P GP P+ N Q PP PQ Sbjct: 186 GGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQG----PPPPPGKPQ 241 Query: 868 VP 869 P Sbjct: 242 GP 243 >gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] Length = 1499 Score = 62.0 bits (149), Expect = 2e-09 Identities = 95/370 (25%), Positives = 118/370 (31%), Gaps = 56/370 (15%) Query: 505 SGSPPHQGPWGSR-FPELEGVFPV--------GFGDSEVSPLTIEDPKHVCDPPSGPDTT 555 SG+P GP G + P G+ G G+ D P GP Sbjct: 749 SGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGP 808 Query: 556 PAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGP-----YLGPPHSRSLPDILGQPE 610 + E P GPP + P + NGP + GP P + G+P Sbjct: 809 AGPTGEKGEPGPRGLVGPPGSRGNPGSRGE----NGPTGAVGFAGPQGPDGQPGVKGEPG 864 Query: 611 PPQEGGSQKSPPPGSLEYLCLP---------AGGQVQLVPLAQAMGPGQAVEVERRPSQG 661 P + G SP P L P GG+ P PG A V G Sbjct: 865 EPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAG 924 Query: 662 AAG-SPSLESGGGPAPPAL--GPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLV 718 A G + L G PP L P G+ P P GD DPG Sbjct: 925 APGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDG--- 981 Query: 719 FTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPR 778 P A + +G+P + PGL GP G PG V P + Sbjct: 982 --PPGPAGTTGQRGIVGMPGQRGERGMPGL-PGPAGTPGKV----------GPTGATGDK 1028 Query: 779 SPRNNPVPPEAKSPVLNPG-ERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRS 837 P PP + PV PG E PA T + + GD PGP L Sbjct: 1029 GPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGD--------PGPAGLPG 1080 Query: 838 KPSSPG-PGP 846 +PG PGP Sbjct: 1081 SQGAPGTPGP 1090 Score = 56.2 bits (134), Expect = 1e-07 Identities = 102/417 (24%), Positives = 139/417 (33%), Gaps = 60/417 (14%) Query: 506 GSPPHQGPWGSRFP---------ELEGV-FPVGFGDSEVSPLTIEDPKHV---------C 546 G P H GP G P E G+ VG V P+ P+ + Sbjct: 177 GHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPT 236 Query: 547 DPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDIL 606 PP P + + P P PG P P + + + + G P +R P Sbjct: 237 GPPGEPGDPGPMGPIGSRGPEGP-PGKPGEDGEPGRNGNPGEVG--FAGSPGARGFPGAP 293 Query: 607 GQP-------EPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPS 659 G P EG + PGS + P G + PL PG+ + + + Sbjct: 294 GLPGLKGHRGHKGLEGPKGEVGAPGS-KGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGA 352 Query: 660 QGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPV--AIPMSSGDTEDPGVASGYVSSADL 717 G G+ + GP P P G A P + E P G Sbjct: 353 PGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 412 Query: 718 VFTPN-SGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKS----GFEGYVELPPI 772 V +P GA P P+ + P ++GPPG+PGP S G G P + Sbjct: 413 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGV 472 Query: 773 EG-RSPRSPRNNPVPPEAKSPVLNPGER--------PADVSPTSPQPE-GLLVLQQVGDY 822 G + P+ P P + P+ PGE P V P P E G + Sbjct: 473 PGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGS 532 Query: 823 CFLPG-------LGP----GPLSLRSKPSSPG-PG-PEIKNLDQAFQVKKPPGQAVP 866 LPG GP GP + P PG PG P + L V+ P G+ P Sbjct: 533 DGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGP 589 Score = 55.1 bits (131), Expect = 3e-07 Identities = 106/387 (27%), Positives = 126/387 (32%), Gaps = 73/387 (18%) Query: 497 PGSMSAFTS--GSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDT 554 PGS S F G GP G+R PE P G P + P G D Sbjct: 374 PGS-SGFPGNPGMKGEAGPTGARGPE----GPQGQRGETGPPGPVGSPG--LPGAIGTDG 426 Query: 555 TPAASDLPTEQP-PSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQ 613 TP A PT P S PG +P Q S+ GP R P G P Sbjct: 427 TPGAKG-PTGSPGTSGPPGSAGPPGSPGPQGST--------GPQGIRGQPGDPGVPGFKG 477 Query: 614 EGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGGG 673 E G + P P ++ P G + + P G V R + G G P S G Sbjct: 478 EAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPG--SDGL 535 Query: 674 PAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVAS--GYVSSADLVFTPNSGASSVSLV 731 P P G Q ++ PV G DPG G + L P L Sbjct: 536 PGPK------GAQGER-GPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLG 588 Query: 732 PSLGLPSDQTPSLCPGLASGPPGAPGPVK-SGFEGYVELPPIEGRSPRSPRNNPVPPEAK 790 P LG P + G PG PG + G G + LP P+ +P P Sbjct: 589 P-LGAPGED----------GRPGPPGSIGIRGQPGSMGLP-----GPKGSSGDPGKPGEA 632 Query: 791 SPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLG--------PGPLSLRSKPSSP 842 PG+R A P G VG PGL PGP + P P Sbjct: 633 GNAGVPGQRGAPGKDGEVGPSG-----PVGP----PGLAGERGEQGPPGPTGFQGLPGPP 683 Query: 843 GPGPEIKNLDQAFQVKKPPGQAVPQVP 869 GP E KP Q VP P Sbjct: 684 GPPGE---------GGKPGDQGVPGDP 701 Score = 54.7 bits (130), Expect = 4e-07 Identities = 78/294 (26%), Positives = 96/294 (32%), Gaps = 30/294 (10%) Query: 569 PQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLEY 628 P P P S P + GP GP P + GQP P G P P L Sbjct: 131 PGPAGPPGSQGPRGERGPKGRPGPR-GPQGIDGEPGVPGQPGAPGPPGHPSHPGPDGLSR 189 Query: 629 LCLPAGGQVQLVPLAQAMG------PGQAVEVERRPSQGAAGSPSLESGGGPAPPALGPR 682 P Q+ + +G PG V R QG G GP P Sbjct: 190 ---PFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPG 246 Query: 683 VGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTP 742 G P P G+ +PG + ++ F + GA P GLP + Sbjct: 247 PMGPIGSRGPEGPPGKPGEDGEPGRNG---NPGEVGFAGSPGARGFPGAP--GLPGLKGH 301 Query: 743 SLCPGLASGPPGAPG-PVKSGFEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPA 801 GL GP G G P G G P+ P PR P P PG+R A Sbjct: 302 RGHKGL-EGPKGEVGAPGSKGEAG--PTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGA 358 Query: 802 DVSPTSPQPEGLLVLQQVGDYCFLPGL----GP-------GPLSLRSKPSSPGP 844 P P P G L + + PG+ GP GP R + PGP Sbjct: 359 HGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP 412 Score = 43.9 bits (102), Expect = 7e-04 Identities = 97/407 (23%), Positives = 132/407 (32%), Gaps = 86/407 (21%) Query: 496 PPGSMSAFTSGSPPHQGPWGSRFPE----------LEGVFPVGFGDSEVSPLTIEDPKHV 545 PPGS +G P GP GS P+ + G E P I+ P Sbjct: 442 PPGS-----AGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGP--- 493 Query: 546 CDPPSGPDTTPAASDLPTEQPPSP--------QPGPPAASHTPEKQASSFDFNGPY--LG 595 PP D T PP P G P + P + + + GP G Sbjct: 494 IGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGE-RGPVGSSG 552 Query: 596 PPHSRSLPDILGQPEPPQEGGSQKSP----------------------PPGSLEYLCLPA 633 P S+ P G+P P G +P PPGS+ P Sbjct: 553 PKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQP- 611 Query: 634 GGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKD--- 690 G P + PG+ E G G+P + GP+ P P + G+ + Sbjct: 612 GSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPP 671 Query: 691 ---------SPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSL-GLPSDQ 740 P P G D GV + L G P + GLP ++ Sbjct: 672 GPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEK 731 Query: 741 TPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGR-SPRSPRNNPVPPEAKSPVLNPGER 799 + G GP G+PGP SG G P ++G R P P + + GE+ Sbjct: 732 GMAGGHG-PDGPKGSPGP--SGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGI---GEK 785 Query: 800 PADVSPTSPQPEGLLVLQQVGDYCFLPG-LG-PGPLSLRSKPSSPGP 844 A+ + + G LPG LG PGP + PGP Sbjct: 786 GAEGTAGNDGARG------------LPGPLGPPGPAGPTGEKGEPGP 820 Score = 43.9 bits (102), Expect = 7e-04 Identities = 96/386 (24%), Positives = 113/386 (29%), Gaps = 98/386 (25%) Query: 487 FQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVC 546 F + + PPG +G+P GP G P EG P G S + D Sbjct: 910 FPGSAGRVGPPGP-----AGAPGPAGPLGE--PGKEG--PPGLRGDPGSHGRVGDRG--- 957 Query: 547 DPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDIL 606 P+GP P P E GPP GP + I+ Sbjct: 958 --PAGPPGGPGDKGDPGEDGQPGPDGPP--------------------GPAGTTGQRGIV 995 Query: 607 GQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSP 666 G P E G P P P G P PG V +G AG+ Sbjct: 996 GMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGND 1055 Query: 667 SL--------ESG--GGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSAD 716 E G G P P L P G PV P +G DPG S Sbjct: 1056 GTPGRDGAVGERGDRGDPGPAGL-PGSQGAPGTPGPVGAPGDAGQRGDPG-------SRG 1107 Query: 717 LVFTPNSGASSVSLVPSLGLPSDQTPSLCPG-----------------LASGPPGAPGPV 759 + P GLP Q P G G PG PGP Sbjct: 1108 PIGPPGRAGKR-------GLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGP- 1159 Query: 760 KSGFEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQV 819 +G +G +P P PR P P NPG + P P V V Sbjct: 1160 -NGEQGSAGIP-----GPFGPRGPPGPVGPSGKEGNPG----PLGPIGPPG----VRGSV 1205 Query: 820 GDYCFLPGLGP-GPLSLRSKPSSPGP 844 G+ GP GP P PGP Sbjct: 1206 GE------AGPEGPPGEPGPPGPPGP 1225 Score = 35.4 bits (80), Expect = 0.24 Identities = 59/225 (26%), Positives = 75/225 (33%), Gaps = 30/225 (13%) Query: 684 GGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPS 743 G + QK P +P+ +G PG A P S P G P + P Sbjct: 110 GRKGQKGEPGLVPVVTGIRGRPGPAG----------PPGSQGPRGERGPK-GRPGPRGPQ 158 Query: 744 LCPGLAS--GPPGAPGPVKSGFEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPA 801 G G PGAPGP G+ P +G S E G P Sbjct: 159 GIDGEPGVPGQPGAPGP-----PGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPG 213 Query: 802 DVSPTSPQ-PEGLLVLQQVGDYCFLPGL----GP-GPLSLRSKPSSPG-PGPEIK----- 849 V P P+ P+GL Q PG GP GP+ R PG PG + + Sbjct: 214 SVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNG 273 Query: 850 NLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDYLSLPPWEVNKPG 894 N + P + P P + K + L P EV PG Sbjct: 274 NPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPG 318 >gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] Length = 1073 Score = 61.6 bits (148), Expect = 3e-09 Identities = 106/373 (28%), Positives = 131/373 (35%), Gaps = 77/373 (20%) Query: 496 PPGSMSAFTSGSPPHQGPWGSR----FPELEGVFPVGFGDSEVSPLTIED-PKHVC-DPP 549 PPG SG P +G GSR FP +G S +SP I K VC D P Sbjct: 511 PPGP-----SGPPGDKGSPGSRGLPGFPGPQGPAGRDGLSSLLSPGDINLLAKDVCNDCP 565 Query: 550 SGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQP 609 GP P LP + PG P T K+ + GPP P I G Sbjct: 566 PGP---PGLPGLPGFKGDKGVPGKPGREGTEGKKGEA--------GPPGLPGPPGIAGPQ 614 Query: 610 EPPQEGGS-----QKSPP--PGSLEYLCLPAG-GQVQLVPLAQAMGPGQAVEVERRPSQG 661 E G+ QK PG ++ P G +A A GP G Sbjct: 615 GSQGERGADGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGP-----------PG 663 Query: 662 AAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTP 721 GSP E GP P+ P + G++ K+ P G +PG A Sbjct: 664 IQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKP---GPPGEPGKAG------------ 708 Query: 722 NSGASSVSLVPSLGLPSDQTPSLCPGLA--SGPPGAPGPVKSGFEGYVELPPIEGRSPRS 779 GLP + PG +G GAPGP G G + LP EG + Sbjct: 709 -----------EPGLPGPEGARGPPGFKGHTGDSGAPGP--RGESGAMGLPGQEGLPGKD 755 Query: 780 PRNNPVPPEA-KSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSK 838 P P+ + P PG+ + SP P P G + PGL PG L R Sbjct: 756 GDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGL-PGFLGPRGP 814 Query: 839 PSSPG----PGPE 847 P PG PG E Sbjct: 815 PGEPGEKGVPGKE 827 Score = 49.3 bits (116), Expect = 2e-05 Identities = 78/294 (26%), Positives = 99/294 (33%), Gaps = 48/294 (16%) Query: 496 PPGSMS-AFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDT 554 PPG+ A +G P QG G P P G S + + E+ K D GP Sbjct: 649 PPGADGIAGAAGPPGIQGSPGKEGP------PGPQGPSGLPGIPGEEGKEGRDGKPGPPG 702 Query: 555 TPAASDLPTEQPPSPQPGPPA-ASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQ 613 P + P P GPP HT + A +G P LP G P Sbjct: 703 EPGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGDTGPTG 762 Query: 614 EGGSQ-KSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGG 672 G Q PPG P PG + ++ S+G GSP L Sbjct: 763 PQGPQGPRGPPGKNGSPGSPGE-------------PGPSGTPGQKGSKGENGSPGLPGFL 809 Query: 673 GPAPPALGP---RVGGQDQKDSPVAIPMSSGDTEDPGV------ASGYVSSADLVFTPNS 723 GP P P V G++ P G+ DPG+ G D + Sbjct: 810 GPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIPGHK 869 Query: 724 GASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSP 777 G L+ GLP + P GPPG PG + GF P + G SP Sbjct: 870 G--HTGLMGPQGLPGENGP-------VGPPGPPG--QPGF------PGLRGESP 906 Score = 40.0 bits (92), Expect = 0.010 Identities = 56/241 (23%), Positives = 77/241 (31%), Gaps = 33/241 (13%) Query: 549 PSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGP---------------- 592 P GP P +P ++ +PG P D P Sbjct: 811 PRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIPGHKG 870 Query: 593 ---YLGPPHSRSLPDILGQPEPPQEGGSQ----KSPPPGSLEYLCLPAGG---QVQLVPL 642 +GP +G P PP + G +SP +L L G + +L L Sbjct: 871 HTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLIQEELGKQLETRLAYL 930 Query: 643 AQAMGPGQAVEVERRPSQ-GAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGD 701 M P + RP G G L GP P GG + P+ G Sbjct: 931 LAQMPPAYMKSSQGRPGPPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGA 990 Query: 702 TEDPGVAS----GYVSSADLVFTPNSGASSVSLVPSLGLPSDQT-PSLCPGLASGPPGAP 756 DPG G + + P + +P + P +T P+ PGL GPPG P Sbjct: 991 KGDPGAPGVGLRGEMGPPGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGL-PGPPGPP 1049 Query: 757 G 757 G Sbjct: 1050 G 1050 Score = 34.3 bits (77), Expect = 0.53 Identities = 60/221 (27%), Positives = 74/221 (33%), Gaps = 51/221 (23%) Query: 648 PGQAVEVERRPSQGAAGSPSLESGGG---PAPPALGPRVGGQD-QKDSPVAI--PMSSGD 701 PG+ + G G P L+ G P P P GQ+ +P A P + G Sbjct: 346 PGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGH 405 Query: 702 TEDPGVAS--GYVSSADLVFTPNSGAS--SVSLVPSLGLPSDQTPSLCPGLASGPPGAPG 757 PG + G V + L TP G P P PG PG PG Sbjct: 406 VGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGA----PGLPG 461 Query: 758 PVKSGFEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQ 817 P G +G P + G SP P P+ G+R A P SP G Sbjct: 462 PPGKGKDGE---PGLRG-SPGLP----------GPLGTKGDRGAPGIPGSPGSRG----- 502 Query: 818 QVGDYCFLPGLG----PGPLSLRSKPSSPG-------PGPE 847 PG+G PGP SPG PGP+ Sbjct: 503 -------DPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQ 536 >gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo sapiens] Length = 1650 Score = 61.2 bits (147), Expect = 4e-09 Identities = 92/340 (27%), Positives = 113/340 (33%), Gaps = 41/340 (12%) Query: 551 GPDTTPAASDLPTEQPPSPQPGPPAASHTPEK--------QASSFDFNGPY--LGPPHSR 600 GP P LP Q P+ PGP P K Q F G GPP Sbjct: 782 GPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVV 841 Query: 601 SLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERR--P 658 G+ P E G P P + L AG + PG+ R P Sbjct: 842 GPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFP 901 Query: 659 SQ----GAAGSPSL---ESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGY 711 + G AG P L E GP PA P G P+ P G PG A Sbjct: 902 GERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAG-- 959 Query: 712 VSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPP 771 + G Q P PG A GPPG G + G +G V P Sbjct: 960 ---------EKGVPGEKGPIGPTGRDGVQGPVGLPGPA-GPPGVAG--EDGDKGEVGDPG 1007 Query: 772 IEG-RSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLG- 829 +G + + P PP PV PG AD P + P+G + GD G Sbjct: 1008 QKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAK--GDEGTRGFNGP 1065 Query: 830 PGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVP 869 PGP+ L+ P G E ++ PPG P+ P Sbjct: 1066 PGPIGLQGLPGPSGEKGETGDVGP----MGPPGPPGPRGP 1101 Score = 45.4 bits (106), Expect = 2e-04 Identities = 84/319 (26%), Positives = 104/319 (32%), Gaps = 61/319 (19%) Query: 564 EQPPSPQPGPPAASHTPEKQASSFDFNGP-YLGPPHSRSLPDILGQPEPPQ--------- 613 E PP P+ GP P Q + P GPP LP G P PP Sbjct: 312 EGPPGPE-GPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRF 370 Query: 614 -EGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGG 672 GG K P + E A +Q LA PG R G GSP L+ Sbjct: 371 GSGGGDKGPVVAAQE---AQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGES 427 Query: 673 GPAPPALGPRVGGQDQKDSP--------VAIPMSSGDTEDPGVAS--GYVSSADLV---- 718 G P GPR G Q P + G DPGV G+ L Sbjct: 428 GDLGPQ-GPR-GPQGLTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKG 485 Query: 719 FTPNSGASSVSLVPS-------------LGLPSDQTPSLCPGLASGPPGAPGPVKSGFEG 765 ++GA + P GLP + P G GPPG PGP Sbjct: 486 HRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLG-PKGPPGIPGP------- 537 Query: 766 YVELPPIEGR-SPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCF 824 P + G P+ P+ + P P PG++ + P P+G + Sbjct: 538 ----PGVRGMDGPQGPKGSLGPQGEPGP---PGQQGTPGTQGLPGPQGAIGPHGEKGPQG 590 Query: 825 LPGLGPGPLSLRSKPSSPG 843 PGL PG P PG Sbjct: 591 KPGL-PGMPGSDGPPGHPG 608 Score = 45.4 bits (106), Expect = 2e-04 Identities = 86/366 (23%), Positives = 123/366 (33%), Gaps = 64/366 (17%) Query: 564 EQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGSQ----- 618 E+ S QPG P P + + D +GP G P P G P PP EGG + Sbjct: 1152 EKGESGQPGEPGP---PGPKGPTGD-DGPK-GNPGPVGFP---GDPGPPGEGGPRGQDGA 1203 Query: 619 --------KSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLES 670 + PGS P G PL + G R+ +GA G P Sbjct: 1204 KGDRGEDGEPGQPGSPG----PTGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIG 1259 Query: 671 GGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTP-------NS 723 G P G+ D +P S G PG A+G V P ++ Sbjct: 1260 APGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPG-ATGQAGPPGPVGPPGLPGLRGDA 1318 Query: 724 GASS----VSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGR-SPR 778 GA L+ +G P +Q GL GP G+PG +G + +P G P Sbjct: 1319 GAKGEKGHPGLIGLIGPPGEQGEKGDRGL-PGPQGSPGQ-----KGEMGIPGASGPIGPG 1372 Query: 779 SPRNNPVP--PEAKSPVLNP----GERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGP 832 P P P P+ P GE+ P P P G ++ P P Sbjct: 1373 GPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPPGEVI-------------QPLP 1419 Query: 833 LSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQ-DYLSLPPWEVN 891 + + K G + D+A PG + +L+++ + + P + Sbjct: 1420 IQMPKKTRRSVDGSRLMQEDEAIPTGGAPGSPGGLEEIFGSLDSLREEIEQMRRPTGTQD 1479 Query: 892 KPGEVC 897 P C Sbjct: 1480 SPARTC 1485 Score = 38.9 bits (89), Expect = 0.022 Identities = 97/402 (24%), Positives = 123/402 (30%), Gaps = 78/402 (19%) Query: 496 PPGSMSAFTSGSPPHQGPWGSRFPE-LEGVFPVGF-GDSEVSPLTIED-PKHVCDPPSGP 552 PPG+ A G P +GP G + ++G PVG G + + ED K P Sbjct: 954 PPGA--AGEKGVPGEKGPIGPTGRDGVQG--PVGLPGPAGPPGVAGEDGDKGEVGDPGQK 1009 Query: 553 DTTPAASDLPTEQPPSP-----QPGPPAASHTPEKQA-----------SSFDFNGPYLGP 596 T + PP P QPG A P + + FNGP GP Sbjct: 1010 GTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPP-GP 1068 Query: 597 PHSRSLPDILGQPEPPQEGGSQKSP-PPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVE 655 + LP G+ + G P PPG PAG P G G Sbjct: 1069 IGLQGLPGPSGEKGETGDVGPMGPPGPPGPRG----PAGPNGADGPQGPPGGVGNLGPPG 1124 Query: 656 RRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSA 715 + G +GSP ++ G P G+ + P G T D G Sbjct: 1125 EKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDG--------- 1175 Query: 716 DLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLAS--------GPPGAPGPV-KSGFEGY 766 P V G P + P G G PG+PGP ++G G Sbjct: 1176 -----PKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG- 1229 Query: 767 VELPPIEGRSPRSPRNNPVPPEAKSPVLNPGE--RPADVSPTSPQPEGLLVLQQVGDYCF 824 P+ R P + K +PG P P P Sbjct: 1230 ----PLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAG-------------- 1271 Query: 825 LPGLGPGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVP 866 P PGP LR P S G QA PPG P Sbjct: 1272 -PAGKPGPDGLRGLPGSVGQQGRPGATGQA----GPPGPVGP 1308 >gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo sapiens] Length = 1629 Score = 61.2 bits (147), Expect = 4e-09 Identities = 92/340 (27%), Positives = 113/340 (33%), Gaps = 41/340 (12%) Query: 551 GPDTTPAASDLPTEQPPSPQPGPPAASHTPEK--------QASSFDFNGPY--LGPPHSR 600 GP P LP Q P+ PGP P K Q F G GPP Sbjct: 761 GPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVV 820 Query: 601 SLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERR--P 658 G+ P E G P P + L AG + PG+ R P Sbjct: 821 GPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFP 880 Query: 659 SQ----GAAGSPSL---ESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGY 711 + G AG P L E GP PA P G P+ P G PG A Sbjct: 881 GERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAG-- 938 Query: 712 VSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPP 771 + G Q P PG A GPPG G + G +G V P Sbjct: 939 ---------EKGVPGEKGPIGPTGRDGVQGPVGLPGPA-GPPGVAG--EDGDKGEVGDPG 986 Query: 772 IEG-RSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLG- 829 +G + + P PP PV PG AD P + P+G + GD G Sbjct: 987 QKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAK--GDEGTRGFNGP 1044 Query: 830 PGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVP 869 PGP+ L+ P G E ++ PPG P+ P Sbjct: 1045 PGPIGLQGLPGPSGEKGETGDVGP----MGPPGPPGPRGP 1080 Score = 45.4 bits (106), Expect = 2e-04 Identities = 84/319 (26%), Positives = 104/319 (32%), Gaps = 61/319 (19%) Query: 564 EQPPSPQPGPPAASHTPEKQASSFDFNGP-YLGPPHSRSLPDILGQPEPPQ--------- 613 E PP P+ GP P Q + P GPP LP G P PP Sbjct: 291 EGPPGPE-GPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRF 349 Query: 614 -EGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGG 672 GG K P + E A +Q LA PG R G GSP L+ Sbjct: 350 GSGGGDKGPVVAAQE---AQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGES 406 Query: 673 GPAPPALGPRVGGQDQKDSP--------VAIPMSSGDTEDPGVAS--GYVSSADLV---- 718 G P GPR G Q P + G DPGV G+ L Sbjct: 407 GDLGPQ-GPR-GPQGLTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKG 464 Query: 719 FTPNSGASSVSLVPS-------------LGLPSDQTPSLCPGLASGPPGAPGPVKSGFEG 765 ++GA + P GLP + P G GPPG PGP Sbjct: 465 HRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLG-PKGPPGIPGP------- 516 Query: 766 YVELPPIEGR-SPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCF 824 P + G P+ P+ + P P PG++ + P P+G + Sbjct: 517 ----PGVRGMDGPQGPKGSLGPQGEPGP---PGQQGTPGTQGLPGPQGAIGPHGEKGPQG 569 Query: 825 LPGLGPGPLSLRSKPSSPG 843 PGL PG P PG Sbjct: 570 KPGL-PGMPGSDGPPGHPG 587 Score = 45.4 bits (106), Expect = 2e-04 Identities = 86/366 (23%), Positives = 123/366 (33%), Gaps = 64/366 (17%) Query: 564 EQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGSQ----- 618 E+ S QPG P P + + D +GP G P P G P PP EGG + Sbjct: 1131 EKGESGQPGEPGP---PGPKGPTGD-DGPK-GNPGPVGFP---GDPGPPGEGGPRGQDGA 1182 Query: 619 --------KSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLES 670 + PGS P G PL + G R+ +GA G P Sbjct: 1183 KGDRGEDGEPGQPGSPG----PTGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIG 1238 Query: 671 GGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTP-------NS 723 G P G+ D +P S G PG A+G V P ++ Sbjct: 1239 APGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPG-ATGQAGPPGPVGPPGLPGLRGDA 1297 Query: 724 GASS----VSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGR-SPR 778 GA L+ +G P +Q GL GP G+PG +G + +P G P Sbjct: 1298 GAKGEKGHPGLIGLIGPPGEQGEKGDRGL-PGPQGSPGQ-----KGEMGIPGASGPIGPG 1351 Query: 779 SPRNNPVP--PEAKSPVLNP----GERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGP 832 P P P P+ P GE+ P P P G ++ P P Sbjct: 1352 GPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPPGEVI-------------QPLP 1398 Query: 833 LSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQ-DYLSLPPWEVN 891 + + K G + D+A PG + +L+++ + + P + Sbjct: 1399 IQMPKKTRRSVDGSRLMQEDEAIPTGGAPGSPGGLEEIFGSLDSLREEIEQMRRPTGTQD 1458 Query: 892 KPGEVC 897 P C Sbjct: 1459 SPARTC 1464 Score = 38.9 bits (89), Expect = 0.022 Identities = 97/402 (24%), Positives = 123/402 (30%), Gaps = 78/402 (19%) Query: 496 PPGSMSAFTSGSPPHQGPWGSRFPE-LEGVFPVGF-GDSEVSPLTIED-PKHVCDPPSGP 552 PPG+ A G P +GP G + ++G PVG G + + ED K P Sbjct: 933 PPGA--AGEKGVPGEKGPIGPTGRDGVQG--PVGLPGPAGPPGVAGEDGDKGEVGDPGQK 988 Query: 553 DTTPAASDLPTEQPPSP-----QPGPPAASHTPEKQA-----------SSFDFNGPYLGP 596 T + PP P QPG A P + + FNGP GP Sbjct: 989 GTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPP-GP 1047 Query: 597 PHSRSLPDILGQPEPPQEGGSQKSP-PPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVE 655 + LP G+ + G P PPG PAG P G G Sbjct: 1048 IGLQGLPGPSGEKGETGDVGPMGPPGPPGPRG----PAGPNGADGPQGPPGGVGNLGPPG 1103 Query: 656 RRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSA 715 + G +GSP ++ G P G+ + P G T D G Sbjct: 1104 EKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDG--------- 1154 Query: 716 DLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLAS--------GPPGAPGPV-KSGFEGY 766 P V G P + P G G PG+PGP ++G G Sbjct: 1155 -----PKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG- 1208 Query: 767 VELPPIEGRSPRSPRNNPVPPEAKSPVLNPGE--RPADVSPTSPQPEGLLVLQQVGDYCF 824 P+ R P + K +PG P P P Sbjct: 1209 ----PLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAG-------------- 1250 Query: 825 LPGLGPGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVP 866 P PGP LR P S G QA PPG P Sbjct: 1251 -PAGKPGPDGLRGLPGSVGQQGRPGATGQA----GPPGPVGP 1287 >gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo sapiens] Length = 1736 Score = 61.2 bits (147), Expect = 4e-09 Identities = 92/340 (27%), Positives = 113/340 (33%), Gaps = 41/340 (12%) Query: 551 GPDTTPAASDLPTEQPPSPQPGPPAASHTPEK--------QASSFDFNGPY--LGPPHSR 600 GP P LP Q P+ PGP P K Q F G GPP Sbjct: 868 GPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVV 927 Query: 601 SLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERR--P 658 G+ P E G P P + L AG + PG+ R P Sbjct: 928 GPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFP 987 Query: 659 SQ----GAAGSPSL---ESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGY 711 + G AG P L E GP PA P G P+ P G PG A Sbjct: 988 GERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAG-- 1045 Query: 712 VSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPP 771 + G Q P PG A GPPG G + G +G V P Sbjct: 1046 ---------EKGVPGEKGPIGPTGRDGVQGPVGLPGPA-GPPGVAG--EDGDKGEVGDPG 1093 Query: 772 IEG-RSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLG- 829 +G + + P PP PV PG AD P + P+G + GD G Sbjct: 1094 QKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAK--GDEGTRGFNGP 1151 Query: 830 PGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVP 869 PGP+ L+ P G E ++ PPG P+ P Sbjct: 1152 PGPIGLQGLPGPSGEKGETGDVGP----MGPPGPPGPRGP 1187 Score = 49.7 bits (117), Expect = 1e-05 Identities = 104/427 (24%), Positives = 137/427 (32%), Gaps = 89/427 (20%) Query: 475 EEKIPNPSKSHLFQNGSAELWPPGSMSAFTS------GSPPHQGPWGSRFPELEGVFPVG 528 EE+I S + +L P + F + G+ P +GP+ + G Sbjct: 299 EEEILESSLLPPLEEEQTDLQVPPTADRFQAEEYGEGGTDPPEGPYD---------YTYG 349 Query: 529 FGD-----SEVSPLTIEDPKHVCDPPSGPDTTPAASDLPT--------EQPPSPQPGPPA 575 +GD +E+ P + H GP P E PP P+ GP Sbjct: 350 YGDDYREETELGPALSAETAHSGAAAHGPRGLKGEKGEPAVLEPGMLVEGPPGPE-GPAG 408 Query: 576 ASHTPEKQASSFDFNGP-YLGPPHSRSLPDILGQPEPPQ----------EGGSQKSPPPG 624 P Q + P GPP LP G P PP GG K P Sbjct: 409 LIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVA 468 Query: 625 SLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGGGPAPPALGPRVG 684 + E A +Q LA PG R G GSP L+ G P GPR G Sbjct: 469 AQE---AQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQ-GPR-G 523 Query: 685 GQDQKDSP--------VAIPMSSGDTEDPGVAS--GYVSSADLV----FTPNSGASSVSL 730 Q P + G DPGV G+ L ++GA + Sbjct: 524 PQGLTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPG 583 Query: 731 VPS-------------LGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGR-S 776 P GLP + P G GPPG PGP P + G Sbjct: 584 PPGEDGERGDDGEIGPRGLPGESGPRGLLG-PKGPPGIPGP-----------PGVRGMDG 631 Query: 777 PRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLR 836 P+ P+ + P P PG++ + P P+G + PGL PG Sbjct: 632 PQGPKGSLGPQGEPGP---PGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGL-PGMPGSD 687 Query: 837 SKPSSPG 843 P PG Sbjct: 688 GPPGHPG 694 Score = 45.4 bits (106), Expect = 2e-04 Identities = 86/366 (23%), Positives = 123/366 (33%), Gaps = 64/366 (17%) Query: 564 EQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGSQ----- 618 E+ S QPG P P + + D +GP G P P G P PP EGG + Sbjct: 1238 EKGESGQPGEPGP---PGPKGPTGD-DGPK-GNPGPVGFP---GDPGPPGEGGPRGQDGA 1289 Query: 619 --------KSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLES 670 + PGS P G PL + G R+ +GA G P Sbjct: 1290 KGDRGEDGEPGQPGSPG----PTGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIG 1345 Query: 671 GGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTP-------NS 723 G P G+ D +P S G PG A+G V P ++ Sbjct: 1346 APGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPG-ATGQAGPPGPVGPPGLPGLRGDA 1404 Query: 724 GASS----VSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGR-SPR 778 GA L+ +G P +Q GL GP G+PG +G + +P G P Sbjct: 1405 GAKGEKGHPGLIGLIGPPGEQGEKGDRGL-PGPQGSPGQ-----KGEMGIPGASGPIGPG 1458 Query: 779 SPRNNPVP--PEAKSPVLNP----GERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGP 832 P P P P+ P GE+ P P P G ++ P P Sbjct: 1459 GPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPPGEVI-------------QPLP 1505 Query: 833 LSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQ-DYLSLPPWEVN 891 + + K G + D+A PG + +L+++ + + P + Sbjct: 1506 IQMPKKTRRSVDGSRLMQEDEAIPTGGAPGSPGGLEEIFGSLDSLREEIEQMRRPTGTQD 1565 Query: 892 KPGEVC 897 P C Sbjct: 1566 SPARTC 1571 Score = 38.9 bits (89), Expect = 0.022 Identities = 97/402 (24%), Positives = 123/402 (30%), Gaps = 78/402 (19%) Query: 496 PPGSMSAFTSGSPPHQGPWGSRFPE-LEGVFPVGF-GDSEVSPLTIED-PKHVCDPPSGP 552 PPG+ A G P +GP G + ++G PVG G + + ED K P Sbjct: 1040 PPGA--AGEKGVPGEKGPIGPTGRDGVQG--PVGLPGPAGPPGVAGEDGDKGEVGDPGQK 1095 Query: 553 DTTPAASDLPTEQPPSP-----QPGPPAASHTPEKQA-----------SSFDFNGPYLGP 596 T + PP P QPG A P + + FNGP GP Sbjct: 1096 GTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPP-GP 1154 Query: 597 PHSRSLPDILGQPEPPQEGGSQKSP-PPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVE 655 + LP G+ + G P PPG PAG P G G Sbjct: 1155 IGLQGLPGPSGEKGETGDVGPMGPPGPPGPRG----PAGPNGADGPQGPPGGVGNLGPPG 1210 Query: 656 RRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSA 715 + G +GSP ++ G P G+ + P G T D G Sbjct: 1211 EKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDG--------- 1261 Query: 716 DLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLAS--------GPPGAPGPV-KSGFEGY 766 P V G P + P G G PG+PGP ++G G Sbjct: 1262 -----PKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPG- 1315 Query: 767 VELPPIEGRSPRSPRNNPVPPEAKSPVLNPGE--RPADVSPTSPQPEGLLVLQQVGDYCF 824 P+ R P + K +PG P P P Sbjct: 1316 ----PLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAG-------------- 1357 Query: 825 LPGLGPGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVP 866 P PGP LR P S G QA PPG P Sbjct: 1358 -PAGKPGPDGLRGLPGSVGQQGRPGATGQA----GPPGPVGP 1394 >gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] Length = 703 Score = 60.1 bits (144), Expect = 9e-09 Identities = 100/337 (29%), Positives = 124/337 (36%), Gaps = 47/337 (13%) Query: 489 NGSAELWPPGSMSAFTSGSPPH-QGPWGSRFPELEGVFPVGFGDS-EVSPLTIEDPKHVC 546 NG + PG+ + PP GP G P L+G+ P GD E P + P+ Sbjct: 208 NGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGL-PGAPGDKGESGPPGVPGPRG-- 264 Query: 547 DP----PSGPDTT-----PAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYL-GP 596 +P P GP P A+ LP Q PS G P + P + P L GP Sbjct: 265 EPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEP-GTRGPPGLIGPTGYGMPGLPGP 323 Query: 597 PHSR---SLPDILG-------QPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAM 646 R +P +LG EP ++G PPG LP G + P +A Sbjct: 324 KGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLP-GRRGPPGPKGEA- 381 Query: 647 GPG-----QAVEVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGD 701 GPG + ++ PS G AG P + G P A GP P P +G Sbjct: 382 GPGGPPGVPGIRGDQGPS-GLAGKPGVPGERG-LPGAHGP-----PGPTGPKGEPGFTGR 434 Query: 702 TEDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQT-PSLCPGLASGPPGAPGPVK 760 PGVA DL G S +P L P+ P PGL G PG PGP Sbjct: 435 PGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGL-KGEPGLPGPPG 493 Query: 761 SGFEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPG 797 G G P G P P P P P PG Sbjct: 494 EGRAGE---PGTAG--PTGPPGVPGSPGITGPPGPPG 525 Score = 50.8 bits (120), Expect = 6e-06 Identities = 86/318 (27%), Positives = 105/318 (33%), Gaps = 52/318 (16%) Query: 546 CDP--PSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSRSLP 603 C P SG AA P + Q GP K G YL P Sbjct: 22 CGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGK--------GQYLEMPLPLLPM 73 Query: 604 DILGQPEPPQEGGSQKSP-PPG----------SLEYLCLPAGGQVQLVPLAQAMGPGQAV 652 D+ G+P PP + G + P PPG L PAG + +A PG Sbjct: 74 DLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPP-GFSRMGKAGPPGLPG 132 Query: 653 EVERRPSQGAAGSPSLESGGG----PAPPAL-GPRVGGQDQKDSPVAIPMSSGDTEDPGV 707 +V G G P + G P PP L GP K +P G +PG Sbjct: 133 KVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGP 192 Query: 708 ASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYV 767 D ++G L + G G A GPPG PGP G G Sbjct: 193 QGEPGPPGDRGLKGDNGVGQPGLPGAPG----------QGGAPGPPGLPGPAGLGKPGLD 242 Query: 768 ELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQ-PEGLLVLQQVGDYCFLP 826 LP G S PP P PG V P P +G+ V G LP Sbjct: 243 GLPGAPGDKGESG-----PPGVPGPRGEPGA----VGPKGPPGVDGVGVPGAAG----LP 289 Query: 827 GLGPGPLSLRSKPSSPGP 844 G GP + +P + GP Sbjct: 290 G-PQGPSGAKGEPGTRGP 306 Score = 47.0 bits (110), Expect = 8e-05 Identities = 82/313 (26%), Positives = 103/313 (32%), Gaps = 55/313 (17%) Query: 496 PPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTT 555 PPG + G P GP G R P GV P GD E + GP Sbjct: 306 PPGLIGPTGYGMPGLPGPKGDRGPA--GV-PGLLGDRGEPGEDGEPGEQGPQGLGGPPGL 362 Query: 556 PAASDLPTEQ-PPSPQP-----GPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQP 609 P ++ LP + PP P+ GPP Q S P G P R LP G P Sbjct: 363 PGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKP--GVPGERGLPGAHGPP 420 Query: 610 EPP----------QEGGSQKSPPPGSLEYLCLPA-----------GGQVQLVPLAQAMGP 648 P + GG + G L LP G Q P+ P Sbjct: 421 GPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLP 480 Query: 649 GQAVE--VERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPG 706 G E + P +G AG P GP P + G P P + G ++ G Sbjct: 481 GLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETG 540 Query: 707 VASGYVSSADLVFTPNSGASSVSL----VPSLG---LPSDQTPSLCPGLASGPPGAPGPV 759 +A + PN G L P G L + TP+ L S P + PV Sbjct: 541 IAG--------LHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPV 592 Query: 760 K------SGFEGY 766 K +G GY Sbjct: 593 KFDRTLYNGHSGY 605 >gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] Length = 1003 Score = 60.1 bits (144), Expect = 9e-09 Identities = 97/380 (25%), Positives = 131/380 (34%), Gaps = 72/380 (18%) Query: 480 NPSKSHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGV---FPVGFGDSEVSP 536 +P H G PP + T P + GP GS PE V FP G + P Sbjct: 131 SPQMFHTVSPGPPSARPPCRVPPTT---PLNGGP-GSLPPEPPSVSQAFPTLAGPGGLFP 186 Query: 537 LTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGP 596 + DP PSG ++P LP PSP P PP A A S+++ Sbjct: 187 PRLADPV-----PSGGSSSPRF--LPRGNAPSPAPPPPPAI---SLNAPSYNWGAAL--- 233 Query: 597 PHSRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVER 656 S +P LG P P S S PP L + A+ P Sbjct: 234 -RSSLVPSDLGSPPAPHASSSPPSDPP---------------LFHCSDALTPPPLPPSNN 277 Query: 657 RPSQ-GAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSA 715 P+ G A P + S P LGP +GG + P A P +AS +S+A Sbjct: 278 LPAHPGPASQPPVSSATMHLPLVLGP-LGGAPTVEGPGAPPF---------LASSLLSAA 327 Query: 716 DLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPP---- 771 + A L P L + + P + P + PP Sbjct: 328 -------AKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQRRP------RRPPTVFR 374 Query: 772 -IEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGP 830 +EGR P++PR + P A +PV P P P P LL L G P Sbjct: 375 LLEGRGPQTPRRS--RPRAPAPVPQPFSLPEPSQPILPSVLSLLGLPTPG-----PSHSD 427 Query: 831 GPLSLRSKPSSPGPGPEIKN 850 G +L + P P + + Sbjct: 428 GSFNLLGSDAHLPPPPTLSS 447 Score = 53.9 bits (128), Expect = 7e-07 Identities = 126/459 (27%), Positives = 155/459 (33%), Gaps = 128/459 (27%) Query: 478 IPNPSKSHL-----FQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDS 532 +P P SH A L PP ++S SGSPP P P L G G Sbjct: 418 LPTPGPSHSDGSFNLLGSDAHLPPPPTLS---SGSPPQ--PRHPIQPSLPGTTS---GSL 469 Query: 533 EVSPLTIEDPKHVCDPPSGPDTTPAASDLPTEQPP---SPQPG-----PPAASHTPEKQA 584 P G PAAS P P SP G PA P Sbjct: 470 SSVP--------------GAPAPPAASKAPVVPSPVLQSPSEGLGMGAGPACPLPPLAGG 515 Query: 585 SSFDFNGPYLGPPHSRS----------LPDILGQPEPPQ-----------EGGSQKSPPP 623 +F F P G S + LP LGQP P GG Q PPP Sbjct: 516 EAFPFPSPEQGLALSGAGFPGMLGALPLPLSLGQPPPSPLLNHSLFGVLTGGGGQ--PPP 573 Query: 624 GSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGGGPAPP------ 677 E L P GG + + GP V P P APP Sbjct: 574 ---EPLLPPPGGPGPPLAPGEPEGPSLLVASLLPPPPSDLLPPP------SAPPSNLLAS 624 Query: 678 -----ALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGA------S 726 ALGP G D + + G + +P SG + L+F P S + Sbjct: 625 FLPLLALGPTAG-----DGEGSAEGAGGPSGEP--FSGLGDLSPLLFPPLSAPPTLIALN 677 Query: 727 SVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSPRNNPVP 786 S L +L PS P C + S P PGP S P ++P N+ P Sbjct: 678 SALLAATLDPPSGTPPQPC--VLSAPQ--PGPPTSSVTTATTDPGASSLG-KAPSNSGRP 732 Query: 787 PEAKSPVL-------------NPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLG-PGP 832 P+ SP+L +PG P+ + P P G L LQ LPG G P P Sbjct: 733 PQLLSPLLGASLLGDLSSLTSSPGALPSLLQPPGPLLSGQLGLQ------LLPGGGAPPP 786 Query: 833 LSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVPVI 871 LS S P + L Q+ Q+ PP Q P+ P + Sbjct: 787 LSEASSP--------LACLLQSLQI--PPEQ--PEAPCL 813 Score = 46.6 bits (109), Expect = 1e-04 Identities = 74/277 (26%), Positives = 93/277 (33%), Gaps = 46/277 (16%) Query: 512 GPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVC----DPPSGPDTTPAASDLPTEQPP 567 GP G F L + P+ F P I + DPPSG P Sbjct: 647 GPSGEPFSGLGDLSPLLFPPLSAPPTLIALNSALLAATLDPPSGTPPQPCVLS------- 699 Query: 568 SPQPGPPAASHTPEKQASSFDFNGPYLG--PPHSRSLPDILGQPEPPQEGGSQKSPPPGS 625 +PQPGPP +S T ++ D LG P +S P +L P G S G Sbjct: 700 APQPGPPTSSVT----TATTDPGASSLGKAPSNSGRPPQLLS----PLLGASLL----GD 747 Query: 626 LEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESGGGPAPPALGPRVGG 685 L L G L L Q GP + ++ + G P L P L Sbjct: 748 LSSLTSSPGA---LPSLLQPPGPLLSGQLGLQLLPGGGAPPPLSEASSPLACLLQSLQIP 804 Query: 686 QDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLC 745 +Q ++P P S +P A +S +L P G P P L Sbjct: 805 PEQPEAPCLPPESPASALEPEPARPPLS---------------ALAPPHGSPDPPVPELL 849 Query: 746 PGLASGPPGAPGPVKSGFEGY-VELPPIEGRSPRSPR 781 G SG G G G G E P GR P S R Sbjct: 850 TGRGSGKRGRRG--GGGLRGINGEARPARGRKPGSRR 884 >gi|38373671 SEC24-related protein C [Homo sapiens] Length = 1094 Score = 59.7 bits (143), Expect = 1e-08 Identities = 90/304 (29%), Positives = 113/304 (37%), Gaps = 42/304 (13%) Query: 496 PPGSMSAF--TSGSPPH---QGPWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPS 550 PP MS +SG+PP Q P G G F G GD + P + + + P S Sbjct: 55 PPQGMSRAPPSSGAPPASTAQAPCGQA---AYGQF--GQGDVQNGPSSTVQMQRL--PGS 107 Query: 551 GPDTTPAASDLPTEQPPSPQP-GPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQP 609 P +P A QPP QP GPP S Q S +G P S L Sbjct: 108 QPFGSPLAP--VGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGF----- 160 Query: 610 EPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMG-PGQAVEVERRPSQGAAGSPSL 668 PP S P S Y P G Q PL+QA G PG PSQ ++ +P Sbjct: 161 GPPTSLASASGSFPNSGLYGSYPQG---QAPPLSQAQGHPGIQTPQRSAPSQASSFTPP- 216 Query: 669 ESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSV 728 SGG P GP + GQ V+ P +VSS P + + Sbjct: 217 ASGGPRLPSMTGPLLPGQSFGGPSVSQP-------------NHVSSPPQALPPGTQMTG- 262 Query: 729 SLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSPRNNPVPPE 788 L P + S Q P P A GP +S + G P G P P+ P+PP+ Sbjct: 263 PLGPLPPMHSPQQPGYQPQQNGSFGPARGP-QSNYGGPYPAAPTFGSQPGPPQ--PLPPK 319 Query: 789 AKSP 792 P Sbjct: 320 RLDP 323 Score = 34.3 bits (77), Expect = 0.53 Identities = 48/191 (25%), Positives = 65/191 (34%), Gaps = 38/191 (19%) Query: 684 GGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPS 743 GGQ +P AIP + + PG TP G S PS G P T Sbjct: 29 GGQSGSTAP-AIPYGAYNGPVPGYQQ----------TPPQGMSRAP--PSSGAPPASTAQ 75 Query: 744 LCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADV 803 G A+ G V++G V++ + G P SP+ G +P + Sbjct: 76 APCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFG-----------SPLAPVGNQPPVL 124 Query: 804 SPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPSSP---GPGPEIKNLDQAF----- 855 P P P V Q+ + P P PSS GP + + +F Sbjct: 125 QPYGPPPTSAQVATQLSGMQISGAVAPAP------PSSGLGFGPPTSLASASGSFPNSGL 178 Query: 856 QVKKPPGQAVP 866 P GQA P Sbjct: 179 YGSYPQGQAPP 189 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.134 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,462,245 Number of Sequences: 37866 Number of extensions: 3168155 Number of successful extensions: 20666 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 1321 Number of HSP's that attempted gapping in prelim test: 12830 Number of HSP's gapped (non-prelim): 5556 length of query: 897 length of database: 18,247,518 effective HSP length: 111 effective length of query: 786 effective length of database: 14,044,392 effective search space: 11038892112 effective search space used: 11038892112 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.