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Search of human proteins with 45593140
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45593140 GTP binding protein 2 [Homo sapiens]
(602 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45593140 GTP binding protein 2 [Homo sapiens] 1192 0.0
gi|82546879 GTP binding protein 1 [Homo sapiens] 505 e-143
gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform... 78 3e-14
gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1... 78 3e-14
gi|34147630 Tu translation elongation factor, mitochondrial prec... 69 9e-12
gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] 67 4e-11
gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [H... 67 5e-11
gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [H... 66 8e-11
gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] 64 3e-10
gi|46094014 peptide chain release factor 3 [Homo sapiens] 64 4e-10
gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens] 64 4e-10
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 62 2e-09
gi|54607086 eukaryotic elongation factor, selenocysteine-tRNA-sp... 50 8e-06
gi|157426893 GUF1 GTPase homolog [Homo sapiens] 44 3e-04
gi|32307177 forkhead box G1 [Homo sapiens] 35 0.20
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 35 0.26
gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo s... 35 0.26
gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo s... 35 0.26
gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo s... 35 0.26
gi|146134341 hypothetical protein LOC133686 isoform 1 [Homo sapi... 34 0.44
gi|240849329 hypothetical protein LOC728392 [Homo sapiens] 33 0.58
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 33 0.58
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 33 0.58
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 33 0.58
gi|4758392 forkhead box D1 [Homo sapiens] 33 0.75
gi|12056465 fibrillarin [Homo sapiens] 33 0.98
gi|109255251 loricrin [Homo sapiens] 33 0.98
gi|32469509 zinc finger and BTB domain containing 12 [Homo sapiens] 32 1.3
gi|51479192 ring finger protein 1 [Homo sapiens] 32 1.7
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 32 1.7
>gi|45593140 GTP binding protein 2 [Homo sapiens]
Length = 602
Score = 1192 bits (3084), Expect = 0.0
Identities = 602/602 (100%), Positives = 602/602 (100%)
Query: 1 MDSRVSELFGGCCRPGGGPAVGGTLKARGAGSSSGCGGPKGKKKNGRNRGGKANNPPYLP 60
MDSRVSELFGGCCRPGGGPAVGGTLKARGAGSSSGCGGPKGKKKNGRNRGGKANNPPYLP
Sbjct: 1 MDSRVSELFGGCCRPGGGPAVGGTLKARGAGSSSGCGGPKGKKKNGRNRGGKANNPPYLP 60
Query: 61 PEAEDGNIEYKLKLVNPSQYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEM 120
PEAEDGNIEYKLKLVNPSQYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEM
Sbjct: 61 PEAEDGNIEYKLKLVNPSQYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEM 120
Query: 121 RASLKTLHRMAEKVGADITVLREREVDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGN 180
RASLKTLHRMAEKVGADITVLREREVDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGN
Sbjct: 121 RASLKTLHRMAEKVGADITVLREREVDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGN 180
Query: 181 VDSGKSTLLGVLTQGELDNGRGRARLNLFRHLHEIQSGRTSSISFEILGFNSKGEVVNYS 240
VDSGKSTLLGVLTQGELDNGRGRARLNLFRHLHEIQSGRTSSISFEILGFNSKGEVVNYS
Sbjct: 181 VDSGKSTLLGVLTQGELDNGRGRARLNLFRHLHEIQSGRTSSISFEILGFNSKGEVVNYS 240
Query: 241 DSRTAEEICESSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGIAGTTREH 300
DSRTAEEICESSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGIAGTTREH
Sbjct: 241 DSRTAEEICESSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGIAGTTREH 300
Query: 301 LGLALALKVPFFIVVSKIDLCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQ 360
LGLALALKVPFFIVVSKIDLCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQ
Sbjct: 301 LGLALALKVPFFIVVSKIDLCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQ 360
Query: 361 QFAQSPNVTPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVP 420
QFAQSPNVTPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVP
Sbjct: 361 QFAQSPNVTPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVP 420
Query: 421 EVGTVVGGTLSSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALG 480
EVGTVVGGTLSSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALG
Sbjct: 421 EVGTVVGGTLSSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALG 480
Query: 481 DFDRALLRKGMVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGNVRQTAVVEK 540
DFDRALLRKGMVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGNVRQTAVVEK
Sbjct: 481 DFDRALLRKGMVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGNVRQTAVVEK 540
Query: 541 IHAKDKLRTGEKAVVRFRFLKHPEYLKVGAKLLFREGVTKGIGHVTDVQAITAGEAQANM 600
IHAKDKLRTGEKAVVRFRFLKHPEYLKVGAKLLFREGVTKGIGHVTDVQAITAGEAQANM
Sbjct: 541 IHAKDKLRTGEKAVVRFRFLKHPEYLKVGAKLLFREGVTKGIGHVTDVQAITAGEAQANM 600
Query: 601 GF 602
GF
Sbjct: 601 GF 602
>gi|82546879 GTP binding protein 1 [Homo sapiens]
Length = 669
Score = 505 bits (1300), Expect = e-143
Identities = 279/582 (47%), Positives = 377/582 (64%), Gaps = 34/582 (5%)
Query: 15 PGGGPAVGGTLKARGAGSSSGCGGPKGKKKNGRNRGGKANNPPYLPPEAEDGNIEYKLKL 74
PG A + G G S C G+ NG PE + + KL L
Sbjct: 26 PGAARAAAAAARLHG-GFDSDCS-EDGEALNGE-------------PELD---LTSKLVL 67
Query: 75 VNPSQYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHRMAEKV 134
V+P+ +++ L+ QM R+ EG GE +Y IG +G GL+E +M AS T+ MAE++
Sbjct: 68 VSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATVKSMAEQI 127
Query: 135 GADITVLREREVDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQ 194
AD+ +LRER+ + ++ + LVRK + FL++RVAV+GNVD+GKSTLLGVLT
Sbjct: 128 EADVILLRERQ-----EAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTH 182
Query: 195 GELDNGRGRARLNLFRHLHEIQSGRTSSISFEILGFNSKGEVVNYSDSRTAE----EICE 250
GELDNGRG AR LFRH HEI+SGRTSS+ +ILGF+S+G VVN DS +ICE
Sbjct: 183 GELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICE 242
Query: 251 SSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGIAGTTREHLGLALALKVP 310
S+K+ITFIDLAGH KYL TT+FG+T + PD +L+V +N GI G T+EHLGLALAL VP
Sbjct: 243 KSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVP 302
Query: 311 FFIVVSKIDLCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQQFAQSPNVTP 370
F+VV+KID+C ++ T++ L+R+LK PGC K+P+LV S+DD + A F+ S + P
Sbjct: 303 VFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFS-SERMCP 361
Query: 371 IFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVPEVGTVVGGTL 430
IF +S+V+GE+LDLLK+FLN+L P T+ +E+E EFQ+D+ Y+VP VGTVV GT
Sbjct: 362 IFQISNVTGENLDLLKMFLNLLSPRTSYREEEP-----AEFQIDDTYSVPGVGTVVSGTT 416
Query: 431 SSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALGDFDRALLRKG 490
G+ + D L++GP G FL + V SI R R + +R GQ A+ AL R+ +RKG
Sbjct: 417 LRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKG 476
Query: 491 MVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGNVRQTAVVEKIHAKDKLRTG 550
MVMVSP +NP FEAEI++L H TT +Q VH G++RQTA + + KD LRTG
Sbjct: 477 MVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMD-KDCLRTG 535
Query: 551 EKAVVRFRFLKHPEYLKVGAKLLFREGVTKGIGHVTDVQAIT 592
+KA V FRF+K PEYL + +L+FREG TK +G +T + T
Sbjct: 536 DKATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTT 577
>gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform 2
[Homo sapiens]
Length = 642
Score = 77.8 bits (190), Expect = 3e-14
Identities = 95/412 (23%), Positives = 172/412 (41%), Gaps = 61/412 (14%)
Query: 173 LRVAVLGNVDSGKSTLLGVLTQGELDNGRGRARLNLFRHLHEIQSGRTSSISF------- 225
L + V+G+VD+GKSTL+G + L N R H +E +S + SF
Sbjct: 219 LNLVVIGHVDAGKSTLMGHMLY-LLGNINKRTM-----HKYEQESKKAGKASFAYAWVLD 272
Query: 226 EILGFNSKGEVVNYSDSRTAEEICESSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALL 285
E +G ++ ++ E+++K+IT +D GH ++ I G D A+L
Sbjct: 273 ETGEERERGVTMDVGMTKF-----ETTTKVITLMDAPGHKDFIPNMITGAAQ--ADVAVL 325
Query: 286 LVSANTG-------IAGTTREHLGLALALKVP-FFIVVSKIDLC--AKTTVERTVRQLER 335
+V A+ G G TREH L +L V + V+K+D + + +L
Sbjct: 326 VVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITGKLGH 385
Query: 336 VLKQPGCHK-----VPMLVTSEDDAVTAAQQFAQSPNVTPIFTLSSVSGESLDLLKVF-- 388
LKQ G + +P S ++ +T +Q S +L K +
Sbjct: 386 FLKQAGFKESDVGFIPTSGLSGENLITRSQ--------------------SSELTKWYKG 425
Query: 389 LNILPPLTNSKEQEELMQQLTEFQVDEIYTVPEVGTVVGGTLSSGICREGDQLVVGPTDD 448
L +L + + K + + + V +++ G + G + +G + GD+L+ P ++
Sbjct: 426 LCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNE 485
Query: 449 GCFLELRVCSIQRNRSACRVLRAGQAATLALGDFDRALLRKGMVMVSPEMNPTICSVFEA 508
C ++ I + AG +L L D + G + P++ C+ F A
Sbjct: 486 TCTVK----GITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRA 541
Query: 509 EIVLLFHATTFRRGFQVTVHVGNVRQTAVVEKIHAKDKLRTGEKAVVRFRFL 560
I++ +GF V +H V + AV++++ + TGE + +FL
Sbjct: 542 RILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFL 593
>gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1
[Homo sapiens]
Length = 684
Score = 77.8 bits (190), Expect = 3e-14
Identities = 95/412 (23%), Positives = 172/412 (41%), Gaps = 61/412 (14%)
Query: 173 LRVAVLGNVDSGKSTLLGVLTQGELDNGRGRARLNLFRHLHEIQSGRTSSISF------- 225
L + V+G+VD+GKSTL+G + L N R H +E +S + SF
Sbjct: 261 LNLVVIGHVDAGKSTLMGHMLY-LLGNINKRTM-----HKYEQESKKAGKASFAYAWVLD 314
Query: 226 EILGFNSKGEVVNYSDSRTAEEICESSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALL 285
E +G ++ ++ E+++K+IT +D GH ++ I G D A+L
Sbjct: 315 ETGEERERGVTMDVGMTKF-----ETTTKVITLMDAPGHKDFIPNMITGAAQ--ADVAVL 367
Query: 286 LVSANTG-------IAGTTREHLGLALALKVP-FFIVVSKIDLC--AKTTVERTVRQLER 335
+V A+ G G TREH L +L V + V+K+D + + +L
Sbjct: 368 VVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITGKLGH 427
Query: 336 VLKQPGCHK-----VPMLVTSEDDAVTAAQQFAQSPNVTPIFTLSSVSGESLDLLKVF-- 388
LKQ G + +P S ++ +T +Q S +L K +
Sbjct: 428 FLKQAGFKESDVGFIPTSGLSGENLITRSQ--------------------SSELTKWYKG 467
Query: 389 LNILPPLTNSKEQEELMQQLTEFQVDEIYTVPEVGTVVGGTLSSGICREGDQLVVGPTDD 448
L +L + + K + + + V +++ G + G + +G + GD+L+ P ++
Sbjct: 468 LCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNE 527
Query: 449 GCFLELRVCSIQRNRSACRVLRAGQAATLALGDFDRALLRKGMVMVSPEMNPTICSVFEA 508
C ++ I + AG +L L D + G + P++ C+ F A
Sbjct: 528 TCTVK----GITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRA 583
Query: 509 EIVLLFHATTFRRGFQVTVHVGNVRQTAVVEKIHAKDKLRTGEKAVVRFRFL 560
I++ +GF V +H V + AV++++ + TGE + +FL
Sbjct: 584 RILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFL 635
>gi|34147630 Tu translation elongation factor, mitochondrial
precursor [Homo sapiens]
Length = 455
Score = 69.3 bits (168), Expect = 9e-12
Identities = 108/439 (24%), Positives = 167/439 (38%), Gaps = 54/439 (12%)
Query: 173 LRVAVLGNVDSGKSTLLGVLTQGELDNGRGRARLNLFRHLHEIQSGRTSSISFEILGFNS 232
+ V +G+VD GK+TL +T+ + G + F+ EI + G
Sbjct: 61 VNVGTIGHVDHGKTTLTAAITKILAEGGGAK-----FKKYEEIDNAPEERAR----GITI 111
Query: 233 KGEVVNYSDSRTAEEICESSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTG 292
V YS ++++ D GH Y+ I G D +L+V+AN G
Sbjct: 112 NAAHVEYS----------TAARHYAHTDCPGHADYVKNMITGTAPL--DGCILVVAANDG 159
Query: 293 IAGTTREHLGLALALKVPFFIV-VSKIDLCAKTT-VERTVRQLERVLKQPGCHKVPMLVT 350
TREHL LA + V +V V+K D + VE ++ +L + G
Sbjct: 160 PMPQTREHLLLARQIGVEHVVVYVNKADAVQDSEMVELVELEIRELLTEFG-------YK 212
Query: 351 SEDDAVTAAQQFAQSPNVTPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTE 410
E+ V P L SV LL +P E+ L+
Sbjct: 213 GEETPVIVGSALCALEGRDPELGLKSVQ----KLLDAVDTYIPVPARDLEKPFLLP---- 264
Query: 411 FQVDEIYTVPEVGTVVGGTLSSGICREGDQL-VVGPTDDGCFLELRVCSIQRNRSACRVL 469
V+ +Y+VP GTVV GTL GI ++GD+ ++G + + + V I+ +
Sbjct: 265 --VEAVYSVPGRGTVVTGTLERGILKKGDECELLGHSKN---IRTVVTGIEMFHKSLERA 319
Query: 470 RAGQAATLALGDFDRALLRKGMVMVSP-EMNPTICSVFEAEIVLLF-----HATTFRRGF 523
AG + R LR+G+VMV P + P EA++ +L F F
Sbjct: 320 EAGDNLGALVRGLKREDLRRGLVMVKPGSIKPH--QKVEAQVYILSKEEGGRHKPFVSHF 377
Query: 524 QVTVHVGNVRQTAVVEKIHAKDKLRTGEKAVVRFRFLKHPEYLKVGAKLLFREG-VTKGI 582
+ + K+ GE L+ P L+ G + R+G T G
Sbjct: 378 MPVMFSLTWDMACRIILPPEKELAMPGEDLKFNL-ILRQPMILEKGQRFTLRDGNRTIGT 436
Query: 583 GHVTDVQAITAGEAQANMG 601
G VT+ A+T E G
Sbjct: 437 GLVTNTLAMTEEEKNIKWG 455
>gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens]
Length = 636
Score = 67.4 bits (163), Expect = 4e-11
Identities = 119/562 (21%), Positives = 208/562 (37%), Gaps = 87/562 (15%)
Query: 19 PAVGGTLKARGAGSSSGCGGPKGKKKNGRNRGGKANNPPYLPPEAEDGNIEYKLKLVNPS 78
P GG GAGS +G R + E N ++L P
Sbjct: 98 PPAGGAANNHGAGSGAG------------GRAAPVESSQEEQSLCEGSNSAVSMELSEPI 145
Query: 79 QYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHRMAEKVGADI 138
+ + + W +E EA E G +G + R ++ H M E+
Sbjct: 146 ENGETEMSPEESWEHKEEISEA------EPGGGSLG----DGRPPEESAHEMMEE----- 190
Query: 139 TVLREREVDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQGELD 198
+ ++P+ + V P + + V +G+VD+GKST+ G + L
Sbjct: 191 ----------EEEIPKPKSVVAPPGAPKKEH---VNVVFIGHVDAGKSTIGGQIMY--LT 235
Query: 199 NGRGRARLNLFRHLHEIQSGRTSSISFEI---LGFNSKGEVVNYSDSRTAEEICESSSKM 255
+ L + + ++ T +S+ + KG+ V E+ K
Sbjct: 236 GMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVE-----VGRAYFETEKKH 290
Query: 256 ITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGI-------AGTTREHLGLALALK 308
T +D GH ++ I G + D A+L++SA G G TREH LA
Sbjct: 291 FTILDAPGHKSFVPNMIGGASQ--ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAG 348
Query: 309 VPFFIV-VSKID----LCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQQFA 363
V IV ++K+D + E +L LK+ G + + +T A
Sbjct: 349 VKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKE 408
Query: 364 QSPNVTPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVPEVG 423
QS L + +L+ LP S + + + +++ ++G
Sbjct: 409 QSDFCPWYIGLPFIP---------YLDNLPNFNRSVDGPIRLPIVDKYK--------DMG 451
Query: 424 TVVGGTLSSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALGDFD 483
TVV G L SG +G QLV+ P + V I + + G+ + L +
Sbjct: 452 TVVLGKLESGSICKGQQLVMMPNKHN----VEVLGILSDDVETDTVAPGENLKIRLKGIE 507
Query: 484 RALLRKGMVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGN-VRQTAVVEKIH 542
+ G ++ P F+A+IV++ H + G+ +H+ + + + I
Sbjct: 508 EEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALIC 567
Query: 543 AKDKLRTGEKAVVRFRFLKHPE 564
DK ++GEK+ R RF+K +
Sbjct: 568 LVDK-KSGEKSKTRPRFVKQDQ 588
>gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [Homo
sapiens]
Length = 463
Score = 67.0 bits (162), Expect = 5e-11
Identities = 95/404 (23%), Positives = 165/404 (40%), Gaps = 49/404 (12%)
Query: 173 LRVAVLGNVDSGKSTLLGVLTQ--GELDNGRGRARLNLFRHLHEIQSG--RTSSISFEIL 228
+ + V+G+VDSGKST G L G +D R + E+ G + + + ++
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDK---RTIEKFEKEAAEMGKGSFKYAWVLDKLK 64
Query: 229 GFNSKGEVVNYSDSRTAEEICESSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVS 288
+G ++ S + E++ IT ID GH ++ I G + DCA+L+V+
Sbjct: 65 AERERGITIDISLWKF-----ETTKYYITIIDAPGHRDFIKNMITGTSQ--ADCAVLIVA 117
Query: 289 ANTGIA-------GTTREHLGLALALKVPFFIV-VSKIDLCAKTTVERT----VRQLERV 336
A G G TREH LA L V IV V+K+D E+ V+++
Sbjct: 118 AGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAY 177
Query: 337 LKQPGCHK--VPMLVTSEDDAVTAAQQFAQSPNVTPIFTLSSV-----SGESLDLLKVFL 389
+K+ G + VP + S SPN+ P F V + + LL+
Sbjct: 178 IKKIGYNPATVPFVPIS---GWHGDNMLEPSPNM-PWFKGWKVERKEGNASGVSLLEALD 233
Query: 390 NILPPLTNSKEQEELMQQLTEFQVDEIYTVPEVGTVVGGTLSSGICREGDQLVVGPTDDG 449
ILPP + + L Q ++Y + +GTV G + +GI R G + P +
Sbjct: 234 TILPPTRPTDKPLRLPLQ-------DVYKIGGIGTVPVGRVETGILRPGMVVTFAPVN-- 284
Query: 450 CFLELRVCSIQRNRSACRVLRAGQAATLALGDFDRALLRKGMVMVSPEMN-PTICSVFEA 508
+ V S++ + A G + + +R+G V + + P + F +
Sbjct: 285 --ITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTS 342
Query: 509 EIVLLFHATTFRRGFQVTVHVGNVRQTAVVEKIHAKDKLRTGEK 552
++++L H G+ + ++ K R+G+K
Sbjct: 343 QVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKK 386
>gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [Homo
sapiens]
Length = 462
Score = 66.2 bits (160), Expect = 8e-11
Identities = 93/411 (22%), Positives = 170/411 (41%), Gaps = 45/411 (10%)
Query: 173 LRVAVLGNVDSGKSTLLGVLTQ--GELDNGRGRARLNLFRHLHEIQSG--RTSSISFEIL 228
+ + V+G+VDSGKST G L G +D R + E+ G + + + ++
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDK---RTIEKFEKEAAEMGKGSFKYAWVLDKLK 64
Query: 229 GFNSKGEVVNYSDSRTAEEICESSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVS 288
+G ++ S + E+S +T ID GH ++ I G + DCA+L+V+
Sbjct: 65 AERERGITIDISLWKF-----ETSKYYVTIIDAPGHRDFIKNMITGTSQ--ADCAVLIVA 117
Query: 289 ANTGIA-------GTTREHLGLALALKVPFFIV-VSKIDLC----AKTTVERTVRQLERV 336
A G G TREH LA L V IV V+K+D ++ E V+++
Sbjct: 118 AGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTY 177
Query: 337 LKQPGCHK-----VPMLVTSEDDAVTAAQQFAQSPNVTPIFTLSSVSGESLDLLKVFLNI 391
+K+ G + VP+ + D+ + + + SG +L L+ I
Sbjct: 178 IKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGNASGTTL--LEALDCI 235
Query: 392 LPPLTNSKEQEELMQQLTEFQVDEIYTVPEVGTVVGGTLSSGICREGDQLVVGPTDDGCF 451
LPP + + L Q ++Y + +GTV G + +G+ + G + P +
Sbjct: 236 LPPTRPTDKPLRLPLQ-------DVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVN---- 284
Query: 452 LELRVCSIQRNRSACRVLRAGQAATLALGDFDRALLRKGMVMVSPEMNPTI-CSVFEAEI 510
+ V S++ + A G + + +R+G V + +P + + F A++
Sbjct: 285 VTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQV 344
Query: 511 VLLFHATTFRRGFQVTVHVGNVRQTAVVEKIHAKDKLRTGEKAVVRFRFLK 561
++L H G+ + ++ K R+G+K +FLK
Sbjct: 345 IILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLK 395
>gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens]
Length = 637
Score = 64.3 bits (155), Expect = 3e-10
Identities = 120/563 (21%), Positives = 208/563 (36%), Gaps = 88/563 (15%)
Query: 19 PAVGGTLKARGAGSSSGCGGPKGKKKNGRNRGGKANNPPYLPPEAEDGNIEYKLKLVNPS 78
P GG GAGS +G R + E N ++L P
Sbjct: 98 PPAGGAANNHGAGSGAG------------GRAAPVESSQEEQSLCEGSNSAVSMELSEPI 145
Query: 79 QYRFE-HLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHRMAEKVGAD 137
E + + W +E EA E G +G + R ++ H M E+
Sbjct: 146 VENGETEMSPEESWEHKEEISEA------EPGGGSLG----DGRPPEESAHEMMEE---- 191
Query: 138 ITVLREREVDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQGEL 197
+ ++P+ + V P + + V +G+VD+GKST+ G + L
Sbjct: 192 -----------EEEIPKPKSVVAPPGAPKKEH---VNVVFIGHVDAGKSTIGGQIMY--L 235
Query: 198 DNGRGRARLNLFRHLHEIQSGRTSSISFEI---LGFNSKGEVVNYSDSRTAEEICESSSK 254
+ L + + ++ T +S+ + KG+ V E+ K
Sbjct: 236 TGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVE-----VGRAYFETEKK 290
Query: 255 MITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGI-------AGTTREHLGLALAL 307
T +D GH ++ I G + D A+L++SA G G TREH LA
Sbjct: 291 HFTILDAPGHKSFVPNMIGGASQ--ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTA 348
Query: 308 KVPFFIV-VSKID----LCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQQF 362
V IV ++K+D + E +L LK+ G + + +T A
Sbjct: 349 GVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLK 408
Query: 363 AQSPNVTPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVPEV 422
QS L + +L+ LP S + + + +++ ++
Sbjct: 409 EQSDFCPWYIGLPFIP---------YLDNLPNFNRSVDGPIRLPIVDKYK--------DM 451
Query: 423 GTVVGGTLSSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALGDF 482
GTVV G L SG +G QLV+ P + V I + + G+ + L
Sbjct: 452 GTVVLGKLESGSICKGQQLVMMPNKHN----VEVLGILSDDVETDTVAPGENLKIRLKGI 507
Query: 483 DRALLRKGMVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGN-VRQTAVVEKI 541
+ + G ++ P F+A+IV++ H + G+ +H+ + + + I
Sbjct: 508 EEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALI 567
Query: 542 HAKDKLRTGEKAVVRFRFLKHPE 564
DK ++GEK+ R RF+K +
Sbjct: 568 CLVDK-KSGEKSKTRPRFVKQDQ 589
>gi|46094014 peptide chain release factor 3 [Homo sapiens]
Length = 628
Score = 63.9 bits (154), Expect = 4e-10
Identities = 100/442 (22%), Positives = 180/442 (40%), Gaps = 59/442 (13%)
Query: 144 REVDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLG--VLTQGELDNGR 201
+E+ + + RK V+V ++ ++ V +G+VD+GKST+ G + G +D
Sbjct: 177 QEMMEEKEEIRKSKSVIVPSGAPKKEHVN--VVFIGHVDAGKSTIGGQIMFLTGMVD--- 231
Query: 202 GRARLNLFRHLHEIQSGRTSSISFEI---LGFNSKGEVVNYSDSRTAEEICESSSKMITF 258
+ L + + ++ T +S+ + KG+ V E+ K T
Sbjct: 232 -KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVE-----VGRAYFETERKHFTI 285
Query: 259 IDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGI-------AGTTREHLGLALALKVPF 311
+D GH ++ I G + D A+L++SA G G TREH LA V
Sbjct: 286 LDAPGHKSFVPNMIGGASQ--ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKH 343
Query: 312 FIV-VSKIDLCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQQFAQSPNVTP 370
IV ++K+D TV ++ + E ++ VP L ++ SP
Sbjct: 344 LIVLINKMD---DPTVNWSIERYEECKEK----LVPFL-----------KKVGFSPKKDI 385
Query: 371 IFT-LSSVSGESLDLLKVF------LNILPPLTNSKEQEELMQQLTEFQVDEIYTVPEVG 423
F S ++G ++ F L +P L N + + + Y ++G
Sbjct: 386 HFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYK--DMG 443
Query: 424 TVVGGTLSSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALGDFD 483
TVV G L SG +G QLV+ P + V I + + + G+ + L +
Sbjct: 444 TVVLGKLESGSIFKGQQLVMMPNKHN----VEVLGILSDDTETDFVAPGENLKIRLKGIE 499
Query: 484 RALLRKGMVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGN-VRQTAVVEKIH 542
+ G ++ P F+ +IV++ H + G+ +H+ + + + I
Sbjct: 500 EEEILPGFILCDPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALIS 559
Query: 543 AKDKLRTGEKAVVRFRFLKHPE 564
DK ++GEK+ R RF+K +
Sbjct: 560 LVDK-KSGEKSKTRPRFVKQDQ 580
>gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens]
Length = 499
Score = 63.9 bits (154), Expect = 4e-10
Identities = 95/435 (21%), Positives = 173/435 (39%), Gaps = 50/435 (11%)
Query: 146 VDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQGELDNGRGRAR 205
++ + ++P+ + V P + + V +G+VD+GKST+ G + L +
Sbjct: 51 MEEEEEIPKPKSVVAPPGAPKKEH---VNVVFIGHVDAGKSTIGGQIMY--LTGMVDKRT 105
Query: 206 LNLFRHLHEIQSGRTSSISFEI---LGFNSKGEVVNYSDSRTAEEICESSSKMITFIDLA 262
L + + ++ T +S+ + KG+ V E+ K T +D
Sbjct: 106 LEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVE-----VGRAYFETEKKHFTILDAP 160
Query: 263 GHHKYLHTTIFGLTSYCPDCALLLVSANTGI-------AGTTREHLGLALALKVPFFIV- 314
GH ++ I G + D A+L++SA G G TREH LA V IV
Sbjct: 161 GHKSFVPNMIGGASQ--ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVL 218
Query: 315 VSKID----LCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQQFAQSPNVTP 370
++K+D + E +L LK+ G + + +T A QS
Sbjct: 219 INKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPW 278
Query: 371 IFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVPEVGTVVGGTL 430
L + +L+ LP S + + + +++ ++GTVV G L
Sbjct: 279 YIGLPFIP---------YLDNLPNFNRSVDGPIRLPIVDKYK--------DMGTVVLGKL 321
Query: 431 SSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALGDFDRALLRKG 490
SG +G QLV+ P + V I + + G+ + L + + G
Sbjct: 322 ESGSICKGQQLVMMPNKHN----VEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPG 377
Query: 491 MVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGN-VRQTAVVEKIHAKDKLRT 549
++ P F+A+IV++ H + G+ +H+ + + + I DK ++
Sbjct: 378 FILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDK-KS 436
Query: 550 GEKAVVRFRFLKHPE 564
GEK+ R RF+K +
Sbjct: 437 GEKSKTRPRFVKQDQ 451
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 61.6 bits (148), Expect = 2e-09
Identities = 71/318 (22%), Positives = 136/318 (42%), Gaps = 16/318 (5%)
Query: 147 DYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQGELDNGRGRARL 206
+YDSD R E K + L + N + ++ ++ VL G +D G+ + L
Sbjct: 592 EYDSDDDRTKEERAYDKAKRRIEKRRLEHSKNVNTEKLRAPIICVL--GHVDTGKTKI-L 648
Query: 207 NLFRHLHEIQSGRTSSISFEILGFNSKGEVVNYSDSRTAEEICESSSKM--ITFIDLAGH 264
+ RH H +Q G I+ +I N E +N ++ + + ++ + ID GH
Sbjct: 649 DKLRHTH-VQDGEAGGITQQIGATNVPLEAIN-EQTKMIKNFDRENVRIPGMLIIDTPGH 706
Query: 265 HKYLHTTIFGLTSYCPDCALLLVSANTGIAGTTREHLGLALALKVPFFIVVSKID----- 319
+ + G +S C D A+L+V G+ T E + L + K PF + ++KID
Sbjct: 707 ESFSNLRNRG-SSLC-DIAILVVDIMHGLEPQTIESINLLKSKKCPFIVALNKIDRLYDW 764
Query: 320 -LCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQQFAQSPNVTPIFTLSSVS 378
+ V T+++ ++ K + ++ A F ++ + +L S
Sbjct: 765 KKSPDSDVAATLKKQKKNTKDEFEERAKAIIVEFAQQGLNAALFYENKDPRTFVSLVPTS 824
Query: 379 GESLDLLKVFLNILPPLTNSKEQEELMQ-QLTEFQVDEIYTVPEVGTVVGGTLSSGICRE 437
+ D + + +L LT + + L + QV E+ +P +GT + L +G +E
Sbjct: 825 AHTGDGMGSLIYLLVELTQTMLSKRLAHCEELRAQVMEVKALPGMGTTIDVILINGRLKE 884
Query: 438 GDQLVVGPTDDGCFLELR 455
GD ++V + ++R
Sbjct: 885 GDTIIVPGVEGPIVTQIR 902
>gi|54607086 eukaryotic elongation factor,
selenocysteine-tRNA-specific [Homo sapiens]
Length = 596
Score = 49.7 bits (117), Expect = 8e-06
Identities = 68/366 (18%), Positives = 139/366 (37%), Gaps = 41/366 (11%)
Query: 171 LDLRVAVLGNVDSGKSTLLGVLTQGELDNGRGRARLNLFRHLHEIQSGRTSSISFEI--- 227
+++ V VLG++DSGK+ L L+ + + + G T + F
Sbjct: 6 VNVNVGVLGHIDSGKTALARALSTTA-------STAAFDKQPQSRERGITLDLGFSCFSV 58
Query: 228 -LGFNSKGEVVNYSDSRTAEEICESSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLL 286
L + + + + AE +T +D GH + T I G + D +L+
Sbjct: 59 PLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGG--AQIIDLMMLV 116
Query: 287 VSANTGIAGTTREHLGLALALKVPFFIVVSKIDLCAK----TTVERTVRQLERVLKQPGC 342
+ G+ + E L + +V++KIDL + +++ +++++ L+
Sbjct: 117 IDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKF 176
Query: 343 HKVPMLVTSEDDAVTAAQQFAQSPNVTPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQE 402
P++ + A + ++P P +L+++ + + T
Sbjct: 177 RGAPIIPVAAKPGGPEAPE-TEAPQGIP------------ELIELLTSQISIPTRDPSGP 223
Query: 403 ELMQQLTEFQVDEIYTVPEVGTVVGGTLSSGICREGDQLVVGPTDDGCFLELRVCSIQRN 462
LM VD +++ GTV+ GT+ SG GD + + + +V S+Q
Sbjct: 224 FLMS------VDHCFSIKGQGTVMTGTILSGSISLGDSVEI----PALKVVKKVKSMQMF 273
Query: 463 RSACRVLRAGQAATLALGDFDRALLRKGMVMVSPEMNPTICSVFEAEIVLLFHATTFRRG 522
G + + FD LL +G+V ++ ++ E + F +
Sbjct: 274 HMPITSAMQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAALISVEKIPYFRGPLQTKA 333
Query: 523 -FQVTV 527
F +TV
Sbjct: 334 KFHITV 339
>gi|157426893 GUF1 GTPase homolog [Homo sapiens]
Length = 669
Score = 44.3 bits (103), Expect = 3e-04
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 176 AVLGNVDSGKSTLLGVLTQ--GELDNGRGRARLNLFRHLHEIQSGRTSSISFEILGFNSK 233
+++ +VD GKSTL L + G +D + ++ L ++Q R I+ +
Sbjct: 72 SIVAHVDHGKSTLADRLLELTGTIDKTKNNKQV-----LDKLQVERERGITVK------- 119
Query: 234 GEVVNYSDSRTAEEI--CESSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANT 291
++TA CE ++ ID GH + + L++ C LL+V AN
Sbjct: 120 --------AQTASLFYNCEGKQYLLNLIDTPGHVDFSYEVSRSLSA-CQG-VLLVVDANE 169
Query: 292 GIAGTTREHLGLALALKVPFFIVVSKIDLCAKTTVERTVRQLERVLKQPG--CHKVPMLV 349
GI T + LA ++ V++KIDL ER Q+E+V P C K+ +
Sbjct: 170 GIQAQTVANFFLAFEAQLSVIPVINKIDL-KNADPERVENQIEKVFDIPSDECIKISAKL 228
Query: 350 TSEDDAVTAA 359
+ ++V A
Sbjct: 229 GTNVESVLQA 238
>gi|32307177 forkhead box G1 [Homo sapiens]
Length = 489
Score = 35.0 bits (79), Expect = 0.20
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 21/74 (28%)
Query: 1 MDSRVSELFGGCCRPGGGP----------------AVGGTLKARGAGSSSGCGGPKGKKK 44
+D ++ GG PGGGP A G K G G G GG +G+KK
Sbjct: 116 LDGAKADGLGGKGEPGGGPGELAPVGPDEKEKGAGAGGEEKKGAGEGGKDGEGGKEGEKK 175
Query: 45 NGRNRGGKANNPPY 58
N GK PP+
Sbjct: 176 N-----GKYEKPPF 184
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 34.7 bits (78), Expect = 0.26
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 15 PGGGPAVGGTLKARGAGSSSGCGGPKGKKK-NGRNRGGKANNPPY-------LPPEAEDG 66
P GG GG G G S+ G PK + G RGG+ ++PPY PP G
Sbjct: 207 PKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPGGPGG 266
Query: 67 NIEYKL 72
E K+
Sbjct: 267 RSEEKI 272
>gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo
sapiens]
Length = 1314
Score = 34.7 bits (78), Expect = 0.26
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Query: 3 SRVSELFGGCCRPGGGPAVGGTLKARGAGSSSGC---GGPKGKKKNGRNRGGKANNP-PY 58
SR SE G GGG A G G G SG GG G + + R GG+ ++P P
Sbjct: 36 SRTSEGSAGSAGLGGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGGGRPSSPSPS 95
Query: 59 LPPEAEDGNIEYKLKLVNPSQYRFEHLVTQMK 90
+ E E +E K + R + V M+
Sbjct: 96 VVSEKEKEELERLQKEEEERKKRLQLYVFVMR 127
>gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo
sapiens]
Length = 1353
Score = 34.7 bits (78), Expect = 0.26
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Query: 3 SRVSELFGGCCRPGGGPAVGGTLKARGAGSSSGC---GGPKGKKKNGRNRGGKANNP-PY 58
SR SE G GGG A G G G SG GG G + + R GG+ ++P P
Sbjct: 36 SRTSEGSAGSAGLGGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGGGRPSSPSPS 95
Query: 59 LPPEAEDGNIEYKLKLVNPSQYRFEHLVTQMK 90
+ E E +E K + R + V M+
Sbjct: 96 VVSEKEKEELERLQKEEEERKKRLQLYVFVMR 127
>gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo
sapiens]
Length = 1274
Score = 34.7 bits (78), Expect = 0.26
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Query: 3 SRVSELFGGCCRPGGGPAVGGTLKARGAGSSSGC---GGPKGKKKNGRNRGGKANNP-PY 58
SR SE G GGG A G G G SG GG G + + R GG+ ++P P
Sbjct: 36 SRTSEGSAGSAGLGGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAGGGRPSSPSPS 95
Query: 59 LPPEAEDGNIEYKLKLVNPSQYRFEHLVTQMK 90
+ E E +E K + R + V M+
Sbjct: 96 VVSEKEKEELERLQKEEEERKKRLQLYVFVMR 127
>gi|146134341 hypothetical protein LOC133686 isoform 1 [Homo
sapiens]
Length = 442
Score = 33.9 bits (76), Expect = 0.44
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 20/152 (13%)
Query: 8 LFGGCCRPGGGPAVGGTLKARGAGSSSGCGGPKGKKKNGRNRGGKANNPPYLPPE----- 62
L G CCR GG A RG G+ GGP + + G + GG+ + P E
Sbjct: 8 LLGSCCRVAGGRAAA----LRGPGA----GGPAARPRLGGDGGGRRHLGQGQPRELAGCG 59
Query: 63 -AEDGNIEYKLKLVNPSQYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMR 121
DG +V R+E Q ++R E E + Q+ GL E
Sbjct: 60 SRADGGFRPSRVVVVAKTTRYE--FEQQRYRYAELSEEDLKQLLALKGSSYSGLLERH-H 116
Query: 122 ASLKTLHRMAEKV---GADITVLREREVDYDS 150
K + + + + G ++ +++ RE D ++
Sbjct: 117 IHTKNVEHIIDSLRNEGIEVRLVKRREYDEET 148
>gi|240849329 hypothetical protein LOC728392 [Homo sapiens]
Length = 119
Score = 33.5 bits (75), Expect = 0.58
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 27 ARGAGSSSGCGGPKGKKKNGRNRGGKANNPPYL----PPEAE 64
ARG S+S G G++ GR +GG+A PP PP+ E
Sbjct: 37 ARGPRSASAAGKKAGRRAGGRAQGGRAGQPPKAASRPPPKKE 78
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo
sapiens]
Length = 1650
Score = 33.5 bits (75), Expect = 0.58
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 15 PGGGPAVGGTLKARGAGSSSGCGGPKGKK 43
PGG P + G +GA ++G GGPKG+K
Sbjct: 1371 PGGPPGLPGPAGPKGAKGATGPGGPKGEK 1399
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo
sapiens]
Length = 1629
Score = 33.5 bits (75), Expect = 0.58
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 15 PGGGPAVGGTLKARGAGSSSGCGGPKGKK 43
PGG P + G +GA ++G GGPKG+K
Sbjct: 1350 PGGPPGLPGPAGPKGAKGATGPGGPKGEK 1378
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo
sapiens]
Length = 1736
Score = 33.5 bits (75), Expect = 0.58
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 15 PGGGPAVGGTLKARGAGSSSGCGGPKGKK 43
PGG P + G +GA ++G GGPKG+K
Sbjct: 1457 PGGPPGLPGPAGPKGAKGATGPGGPKGEK 1485
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 33.1 bits (74), Expect = 0.75
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 16 GGGPAVGGTLKARGAGSSSGCGGPKGKKKNGRNRGGKANNPPYLPP 61
GG PA G A GAG +G GG G G + G A NP PP
Sbjct: 84 GGSPAPPGPAPAAGAG--AGGGGGGGGAGGGGSAGSGAKNPLVKPP 127
>gi|12056465 fibrillarin [Homo sapiens]
Length = 321
Score = 32.7 bits (73), Expect = 0.98
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 10/50 (20%)
Query: 16 GGGPAVGGTLKARGAGSSSGCGGPKGKKK----------NGRNRGGKANN 55
GGG GG + RG G G GG G + GR RGGK N
Sbjct: 31 GGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKRGN 80
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 32.7 bits (73), Expect = 0.98
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 9 FGGCCRPGGGPAVGGTLKARGAGSSSGCGG 38
+GG GGG G + G G SSGCGG
Sbjct: 225 YGGGSSGGGGSGGSGCFSSGGGGGSSGCGG 254
>gi|32469509 zinc finger and BTB domain containing 12 [Homo sapiens]
Length = 459
Score = 32.3 bits (72), Expect = 1.3
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 10/51 (19%)
Query: 15 PGGGPAVGGT----------LKARGAGSSSGCGGPKGKKKNGRNRGGKANN 55
PGG +VG T + ARGAG S G GG +G G + G N
Sbjct: 282 PGGRASVGATSGLVEAAAVAMAARGAGGSLGAGGSRGPLPGGFSGGNPLKN 332
>gi|51479192 ring finger protein 1 [Homo sapiens]
Length = 406
Score = 32.0 bits (71), Expect = 1.7
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 14 RPGGGPAVGGTLKARGAGSSSGCGGPKGKKKNGRNRGGKAN-------NPPYLPPEAEDG 66
RP GG A GG+ G G + G GG G + +G +RGG +PP P E G
Sbjct: 202 RPRGGGA-GGSSVGTGGGGTGGVGGGAGSEDSG-DRGGTLGGGTLGPPSPPGAPSPPEPG 259
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 32.0 bits (71), Expect = 1.7
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 12 CCRPGGGPAVGGTLKARGAGSSSGCGGPKGKKKNGRNRGGKA 53
CCRPGGG GG + G G +G GG + G GG A
Sbjct: 15 CCRPGGGGGGGG---SSGGGGGAG-GGYSSACRPGPRAGGAA 52
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,333,263
Number of Sequences: 37866
Number of extensions: 1037283
Number of successful extensions: 5169
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 4954
Number of HSP's gapped (non-prelim): 207
length of query: 602
length of database: 18,247,518
effective HSP length: 108
effective length of query: 494
effective length of database: 14,157,990
effective search space: 6994047060
effective search space used: 6994047060
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.