Guide to the Human Genome
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Name: GUF1 Sequence: fasta or formatted (669aa) NCBI GI: 157426893
Description:

GUF1 GTPase homolog

Referenced in:

Translation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         55           2
 C cysteine            1.2          8           1
 D aspartate           5.1         34           1
 E glutamate           6.6         44           2
 F phenylalanine       3.4         23           2
 G glycine             5.8         39           2
 H histidine           1.8         12           1
 I isoleucine          6.4         43           2
 K lysine              8.4         56           3
 L leucine            10.2         68           2
 M methionine          1.8         12           2
 N asparagine          4.5         30           2
 P proline             4.5         30           3
 Q glutamine           4.0         27           1
 R arginine            4.5         30           2
 S serine              6.1         41           3
 T threonine           5.2         35           2
 V valine              8.5         57           2
 W tryptophan          0.6          4           1
 Y tyrosine            3.1         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GUF1 GTPase homolog 
EFTUD1                0.071   elongation factor Tu GTP binding domain containing 1...
GFM1                  0.061   G elongation factor, mitochondrial 1 
EEF2                  0.058   eukaryotic translation elongation factor 2 
LOC727963             0.058   PREDICTED: similar to elongation factor Tu GTP bind...
LOC727963             0.058   PREDICTED: similar to elongation factor Tu GTP bind...
LOC727963             0.058   PREDICTED: similar to elongation factor Tu GTP bind...
GFM2                  0.057   mitochondrial elongation factor G2 isoform 2 
GFM2                  0.057   mitochondrial elongation factor G2 isoform 3 
GFM2                  0.057   mitochondrial elongation factor G2 isoform 1 
EFTUD2                0.049   elongation factor Tu GTP binding domain containing ...
EFTUD2                0.049   elongation factor Tu GTP binding domain containing ...
MTIF2                 0.046   mitochondrial translational initiation factor 2 prec...
MTIF2                 0.046   mitochondrial translational initiation factor 2 prec...
HBS1L                 0.039   Hsp70 subfamily B suppressor 1-like protein isoform...
HBS1L                 0.039   Hsp70 subfamily B suppressor 1-like protein isoform 1...
TUFM                  0.034   Tu translation elongation factor, mitochondrial prec...
EFTUD1                0.034   elongation factor Tu GTP binding domain containing 1...
EEF1A1                0.031   eukaryotic translation elongation factor 1 alpha 1 [H...
LOC100293909          0.029   PREDICTED: similar to eukaryotic translation elonga...
EEF1A2                0.029   eukaryotic translation elongation factor 1 alpha 2 [H...
GSPT2                 0.023   peptide chain release factor 3 
GSPT1                 0.022   G1 to S phase transition 1 isoform 3 
GSPT1                 0.022   G1 to S phase transition 1 isoform 2 
GSPT1                 0.022   G1 to S phase transition 1 isoform 1 
EEFSEC                0.019   eukaryotic elongation factor, selenocysteine-tRNA-sp...
EIF5B                 0.019   eukaryotic translation initiation factor 5B 
EIF2S3                0.016   eukaryotic translation initiation factor 2, subunit 3...
GTPBP2                0.015   GTP binding protein 2 
ADORA3                0.009   adenosine A3 receptor isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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