Guide to the Human Genome
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Name: GTPBP2 Sequence: fasta or formatted (602aa) NCBI GI: 45593140
Description:

GTP binding protein 2

Referenced in:

Additional Guanine Nucleotide-binding Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         40           2
 C cysteine            2.2         13           2
 D aspartate           4.3         26           2
 E glutamate           7.1         43           3
 F phenylalanine       4.0         24           2
 G glycine             9.6         58           3
 H histidine           2.3         14           2
 I isoleucine          4.0         24           1
 K lysine              5.5         33           3
 L leucine            10.6         64           3
 M methionine          2.0         12           1
 N asparagine          3.5         21           2
 P proline             3.8         23           2
 Q glutamine           4.0         24           2
 R arginine            6.6         40           2
 S serine              6.0         36           3
 T threonine           6.5         39           2
 V valine              9.5         57           2
 W tryptophan          0.2          1           1
 Y tyrosine            1.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GTP binding protein 2 
GTPBP1                0.411   GTP binding protein 1 
HBS1L                 0.045   Hsp70 subfamily B suppressor 1-like protein isoform...
HBS1L                 0.045   Hsp70 subfamily B suppressor 1-like protein isoform 1...
TUFM                  0.038   Tu translation elongation factor, mitochondrial prec...
GSPT1                 0.036   G1 to S phase transition 1 isoform 2 
EEF1A2                0.036   eukaryotic translation elongation factor 1 alpha 2 [H...
EEF1A1                0.035   eukaryotic translation elongation factor 1 alpha 1 [H...
GSPT1                 0.033   G1 to S phase transition 1 isoform 1 
GSPT2                 0.033   peptide chain release factor 3 
GSPT1                 0.033   G1 to S phase transition 1 isoform 3 
EIF5B                 0.032   eukaryotic translation initiation factor 5B 
EEFSEC                0.021   eukaryotic elongation factor, selenocysteine-tRNA-sp...
GUF1                  0.016   GUF1 GTPase homolog 
FOXG1                 0.009   forkhead box G1 
SFPQ                  0.009   splicing factor proline/glutamine rich (polypyrimidin...
CADPS                 0.009   Ca2+-dependent secretion activator isoform 2 
CADPS                 0.009   Ca2+-dependent secretion activator isoform 1 
CADPS                 0.009   Ca2+-dependent secretion activator isoform 3 
C5orf33               0.008   hypothetical protein LOC133686 isoform 1 
LOC728392             0.007   hypothetical protein LOC728392 
COL11A2               0.007   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.007   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.007   collagen, type XI, alpha 2 isoform 1 preproprotein ...
FOXD1                 0.007   forkhead box D1 
FBL                   0.007   fibrillarin 
LOR                   0.007   loricrin 
ZBTB12                0.006   zinc finger and BTB domain containing 12 
RING1                 0.006   ring finger protein 1 
ZSWIM6                0.006   zinc finger, SWIM-type containing 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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