Guide to the Human Genome
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Name: ZBTB12 Sequence: fasta or formatted (459aa) NCBI GI: 32469509
Description:

zinc finger and BTB domain containing 12

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         42           3
 C cysteine            3.3         15           1
 D aspartate           3.5         16           1
 E glutamate           7.2         33           3
 F phenylalanine       3.5         16           1
 G glycine             9.2         42           3
 H histidine           3.9         18           1
 I isoleucine          3.7         17           1
 K lysine              5.2         24           1
 L leucine            11.1         51           3
 M methionine          1.7          8           1
 N asparagine          3.1         14           1
 P proline             7.4         34           6
 Q glutamine           2.8         13           1
 R arginine            5.4         25           2
 S serine              8.1         37           2
 T threonine           2.8         13           2
 V valine              7.6         35           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 12 
ZBTB6                 0.236   zinc finger and BTB domain containing 6 
ZBTB26                0.134   zinc finger and BTB domain containing 26 
ZBTB34                0.132   zinc finger and BTB domain containing 34 
ZBTB7B                0.108   zinc finger and BTB domain containing 7B 
LOC100293130          0.108   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.108   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.108   PREDICTED: similar to kruppel-related zinc finger p...
ZBTB9                 0.103   zinc finger and BTB domain containing 9 
ZBTB37                0.089   zinc finger and BTB domain containing 37 isoform a ...
ZBTB37                0.089   zinc finger and BTB domain containing 37 isoform b [...
HIC1                  0.088   hypermethylated in cancer 1 isoform 2 
HIC1                  0.088   hypermethylated in cancer 1 isoform 1 
ZBTB43                0.083   zinc finger and BTB domain containing 43 
ZBTB43                0.083   zinc finger and BTB domain containing 43 
GFI1                  0.079   growth factor independent 1 
GFI1                  0.079   growth factor independent 1 
GFI1                  0.079   growth factor independent 1 
ZNF91                 0.079   zinc finger protein 91 
ZNF853                0.079   zinc finger protein 853 
ZNF808                0.078   zinc finger protein 808 
ZIK1                  0.078   zinc finger protein interacting with K protein 1 [Ho...
ZBTB22                0.076   zinc finger and BTB domain containing 22 
ZBTB22                0.076   zinc finger and BTB domain containing 22 
ZNF610                0.075   zinc finger protein 610 isoform b 
ZNF610                0.075   zinc finger protein 610 isoform a 
ZNF610                0.075   zinc finger protein 610 isoform a 
ZNF610                0.075   zinc finger protein 610 isoform a 
ZNF792                0.075   zinc finger protein 792 
ZNF358                0.074   zinc finger protein 358 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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