Guide to the Human Genome
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Name: CADPS Sequence: fasta or formatted (1274aa) NCBI GI: 34452711
Description:

Ca2+-dependent secretion activator isoform 3

Referenced in:

Neurons

Other entries for this name:
alt prot [1314aa] Ca2+-dependent secretion activator isoform 2
alt prot [1353aa] Ca2+-dependent secretion activator isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         87           2
 C cysteine            1.4         18           1
 D aspartate           5.6         71           2
 E glutamate           9.3        118           4
 F phenylalanine       4.4         56           2
 G glycine             6.4         81           5
 H histidine           2.2         28           2
 I isoleucine          3.9         50           2
 K lysine              6.7         85           2
 L leucine             9.3        119           2
 M methionine          3.3         42           1
 N asparagine          3.1         40           2
 P proline             3.8         48           2
 Q glutamine           5.3         68           2
 R arginine            5.6         71           2
 S serine              7.8        100           3
 T threonine           4.4         56           2
 V valine              6.8         87           2
 W tryptophan          1.3         16           2
 Y tyrosine            2.6         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ca2+-dependent secretion activator isoform 3 
CADPS                 0.990   Ca2+-dependent secretion activator isoform 2 
CADPS                 0.981   Ca2+-dependent secretion activator isoform 1 
CADPS2                0.767   Ca2+-dependent activator protein for secretion 2 is...
CADPS2                0.758   Ca2+-dependent activator protein for secretion 2 is...
YEATS2                0.015   YEATS domain containing 2 
RFX1                  0.013   regulatory factor X1 
SHOX2                 0.013   short stature homeobox 2 isoform a 
MAF                   0.012   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.012   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
KRT10                 0.012   keratin 10 
FOXD1                 0.012   forkhead box D1 
SIX3                  0.011   sine oculis homeobox homolog 3 
ZIC2                  0.011   zinc finger protein of the cerebellum 2 
LRCH2                 0.011   leucine-rich repeats and calponin homology (CH) dom...
FAM98B                0.011   family with sequence similarity 98, member B isofor...
WIPF1                 0.010   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.010   WAS/WASL interacting protein family, member 1 
POU4F1                0.010   POU domain, class 4, transcription factor 1 
PURA                  0.010   purine-rich element binding protein A 
KRT2                  0.010   keratin 2 
TWIST1                0.010   twist 
GSK3A                 0.010   glycogen synthase kinase 3 alpha 
DACH1                 0.010   dachshund homolog 1 isoform b 
DACH1                 0.010   dachshund homolog 1 isoform a 
DACH1                 0.010   dachshund homolog 1 isoform c 
ARID1B                0.010   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.010   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.010   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
KRT9                  0.010   keratin 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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