GSPT1 10870

Name: GSPT1	Sequence: fasta or formatted (636aa)		NCBI GI: 194097354
Description: G1 to S phase transition 1 isoform 2		Referenced in: Translation Factors
Other entries for this name: alt prot [637aa] G1 to S phase transition 1 isoform 1 alt prot [499aa] G1 to S phase transition 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 47 4 C cysteine 2.2 14 1 D aspartate 4.7 30 2 E glutamate 10.1 64 5 F phenylalanine 3.5 22 1 G glycine 11.0 70 11 H histidine 2.5 16 1 I isoleucine 5.5 35 2 K lysine 7.2 46 2 L leucine 6.8 43 1 M methionine 2.5 16 2 N asparagine 4.1 26 2 P proline 6.9 44 4 Q glutamine 2.5 16 2 R arginine 3.6 23 1 S serine 6.8 43 4 T threonine 4.1 26 1 V valine 6.3 40 2 W tryptophan 0.9 6 1 Y tyrosine 1.4 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 G1 to S phase transition 1 isoform 2 GSPT1 0.996 G1 to S phase transition 1 isoform 1 GSPT2 0.844 peptide chain release factor 3 GSPT1 0.775 G1 to S phase transition 1 isoform 3 HBS1L 0.250 Hsp70 subfamily B suppressor 1-like protein isoform... HBS1L 0.250 Hsp70 subfamily B suppressor 1-like protein isoform 1... EEF1A1 0.225 eukaryotic translation elongation factor 1 alpha 1 [H... EEF1A2 0.221 eukaryotic translation elongation factor 1 alpha 2 [H... LOC100293909 0.194 PREDICTED: similar to eukaryotic translation elonga... TUFM 0.072 Tu translation elongation factor, mitochondrial prec... GTPBP1 0.039 GTP binding protein 1 LOC729856 0.038 PREDICTED: similar to hCG1981735 LOC729856 0.038 PREDICTED: similar to hCG1981735 LOC729856 0.037 PREDICTED: similar to hCG1981735 GTPBP2 0.033 GTP binding protein 2 CHD1 0.027 chromodomain helicase DNA binding protein 1 LOC643563 0.026 PREDICTED: similar to EEF1A1 protein LOC643563 0.026 PREDICTED: similar to EEF1A1 protein LOC643563 0.026 PREDICTED: similar to EEF1A1 protein EEFSEC 0.025 eukaryotic elongation factor, selenocysteine-tRNA-sp... GUF1 0.023 GUF1 GTPase homolog MTIF2 0.021 mitochondrial translational initiation factor 2 prec... MTIF2 0.021 mitochondrial translational initiation factor 2 prec... GFM1 0.021 G elongation factor, mitochondrial 1 EIF2S3 0.020 eukaryotic translation initiation factor 2, subunit 3... HOXD9 0.019 homeobox D9 CNOT3 0.019 CCR4-NOT transcription complex, subunit 3 SETD1A 0.017 SET domain containing 1A GSK3A 0.017 glycogen synthase kinase 3 alpha EIF5B 0.016 eukaryotic translation initiation factor 5B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.