Guide to the Human Genome
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Name: HBS1L Sequence: fasta or formatted (642aa) NCBI GI: 223555963
Description:

Hsp70 subfamily B suppressor 1-like protein isoform 2

Referenced in:

Translation Factors

Other entries for this name:
alt prot [632aa] Hsp70 subfamily B suppressor 1-like protein isoform 3
alt prot [684aa] Hsp70 subfamily B suppressor 1-like protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         42           3
 C cysteine            1.4          9           1
 D aspartate           5.6         36           3
 E glutamate           7.3         47           2
 F phenylalanine       3.7         24           1
 G glycine             8.4         54           2
 H histidine           2.2         14           1
 I isoleucine          5.9         38           2
 K lysine              8.4         54           3
 L leucine             8.1         52           2
 M methionine          2.3         15           1
 N asparagine          2.8         18           1
 P proline             4.4         28           2
 Q glutamine           4.8         31           2
 R arginine            4.2         27           1
 S serine              6.7         43           2
 T threonine           6.5         42           3
 V valine              7.9         51           2
 W tryptophan          0.6          4           1
 Y tyrosine            2.0         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Hsp70 subfamily B suppressor 1-like protein isoform... 
HBS1L                 0.984   Hsp70 subfamily B suppressor 1-like protein isoform 1...
GSPT2                 0.258   peptide chain release factor 3 
GSPT1                 0.255   G1 to S phase transition 1 isoform 3 
GSPT1                 0.255   G1 to S phase transition 1 isoform 2 
GSPT1                 0.255   G1 to S phase transition 1 isoform 1 
EEF1A1                0.237   eukaryotic translation elongation factor 1 alpha 1 [H...
EEF1A2                0.237   eukaryotic translation elongation factor 1 alpha 2 [H...
LOC100293909          0.196   PREDICTED: similar to eukaryotic translation elonga...
HBS1L                 0.130   Hsp70 subfamily B suppressor 1-like protein isoform...
TUFM                  0.094   Tu translation elongation factor, mitochondrial prec...
GTPBP1                0.046   GTP binding protein 1 
EEFSEC                0.043   eukaryotic elongation factor, selenocysteine-tRNA-sp...
GTPBP2                0.042   GTP binding protein 2 
GUF1                  0.040   GUF1 GTPase homolog 
LOC729856             0.035   PREDICTED: similar to hCG1981735 
LOC729856             0.035   PREDICTED: similar to hCG1981735 
LOC729856             0.035   PREDICTED: similar to hCG1981735 
LOC643563             0.034   PREDICTED: similar to EEF1A1 protein 
LOC643563             0.034   PREDICTED: similar to EEF1A1 protein 
LOC643563             0.034   PREDICTED: similar to EEF1A1 protein 
MTIF2                 0.026   mitochondrial translational initiation factor 2 prec...
MTIF2                 0.026   mitochondrial translational initiation factor 2 prec...
GFM1                  0.026   G elongation factor, mitochondrial 1 
LOC727963             0.022   PREDICTED: similar to elongation factor Tu GTP bind...
LOC727963             0.022   PREDICTED: similar to elongation factor Tu GTP bind...
LOC727963             0.022   PREDICTED: similar to elongation factor Tu GTP bind...
EFTUD1                0.022   elongation factor Tu GTP binding domain containing 1...
GFM2                  0.022   mitochondrial elongation factor G2 isoform 2 
GFM2                  0.022   mitochondrial elongation factor G2 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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