Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 45505155
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45505155 F-box protein 38 isoform a [Homo sapiens]
(1113 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45505155 F-box protein 38 isoform a [Homo sapiens] 2274 0.0
gi|45545409 F-box protein 38 isoform b [Homo sapiens] 2097 0.0
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 57 7e-08
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 49 3e-05
gi|4504487 histidine rich calcium binding protein precursor [Hom... 41 0.006
gi|28372531 protein phosphatase 4, regulatory subunit 2 [Homo sa... 40 0.009
gi|62244004 modulator of estrogen induced transcription isoform ... 40 0.016
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 39 0.036
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 39 0.036
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 39 0.036
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 39 0.036
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 39 0.036
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ... 39 0.036
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 38 0.047
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 38 0.047
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 38 0.047
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 38 0.061
gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo sap... 37 0.080
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 37 0.080
gi|116256485 chromosome 6 open reading frame 10 [Homo sapiens] 37 0.14
gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens] 36 0.18
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 36 0.18
gi|239755326 PREDICTED: hypothetical protein [Homo sapiens] 36 0.18
gi|122937227 U2-associated SR140 protein [Homo sapiens] 36 0.18
gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens] 36 0.18
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 36 0.18
gi|51873034 F-box and leucine-rich repeat protein 9 [Homo sapiens] 36 0.23
gi|16306591 F-box and leucine-rich repeat protein 9 [Homo sapiens] 36 0.23
gi|116875765 tight junction protein 1 isoform b [Homo sapiens] 35 0.30
gi|116875767 tight junction protein 1 isoform a [Homo sapiens] 35 0.30
>gi|45505155 F-box protein 38 isoform a [Homo sapiens]
Length = 1113
Score = 2274 bits (5893), Expect = 0.0
Identities = 1113/1113 (100%), Positives = 1113/1113 (100%)
Query: 1 MGPRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKL 60
MGPRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKL
Sbjct: 1 MGPRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKL 60
Query: 61 KEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDASFLTLLKKMPDVEQLYGLHPRYLERRRV 120
KEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDASFLTLLKKMPDVEQLYGLHPRYLERRRV
Sbjct: 61 KEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDASFLTLLKKMPDVEQLYGLHPRYLERRRV 120
Query: 121 RGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPE 180
RGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPE
Sbjct: 121 RGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPE 180
Query: 181 NKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMR 240
NKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMR
Sbjct: 181 NKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMR 240
Query: 241 NCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVL 300
NCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVL
Sbjct: 241 NCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVL 300
Query: 301 GACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDE 360
GACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDE
Sbjct: 301 GACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDE 360
Query: 361 FLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWI 420
FLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWI
Sbjct: 361 FLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWI 420
Query: 421 SDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGT 480
SDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGT
Sbjct: 421 SDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGT 480
Query: 481 GIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADA 540
GIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADA
Sbjct: 481 GIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADA 540
Query: 541 LNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSES 600
LNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSES
Sbjct: 541 LNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSES 600
Query: 601 DDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQS 660
DDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQS
Sbjct: 601 DDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQS 660
Query: 661 KQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNT 720
KQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNT
Sbjct: 661 KQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNT 720
Query: 721 ASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHR 780
ASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHR
Sbjct: 721 ASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHR 780
Query: 781 PQESQRRTSRCSDEERPSTSRACVVNGPDEVAKTKPRHAMKRKRTADKSTSTSDPVIEDD 840
PQESQRRTSRCSDEERPSTSRACVVNGPDEVAKTKPRHAMKRKRTADKSTSTSDPVIEDD
Sbjct: 781 PQESQRRTSRCSDEERPSTSRACVVNGPDEVAKTKPRHAMKRKRTADKSTSTSDPVIEDD 840
Query: 841 HVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPIVNRFDY 900
HVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPIVNRFDY
Sbjct: 841 HVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPIVNRFDY 900
Query: 901 AQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFSGPYPYHICIIHEFSN 960
AQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFSGPYPYHICIIHEFSN
Sbjct: 901 AQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFSGPYPYHICIIHEFSN 960
Query: 961 PPNVRNKVRIRSWMDTIANINQELIKYEFFPEATRSEEDLKKYPKYPWGREIYTLEGVVD 1020
PPNVRNKVRIRSWMDTIANINQELIKYEFFPEATRSEEDLKKYPKYPWGREIYTLEGVVD
Sbjct: 961 PPNVRNKVRIRSWMDTIANINQELIKYEFFPEATRSEEDLKKYPKYPWGREIYTLEGVVD 1020
Query: 1021 GAPYSMISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQLSADICMETIGEEIS 1080
GAPYSMISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQLSADICMETIGEEIS
Sbjct: 1021 GAPYSMISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQLSADICMETIGEEIS 1080
Query: 1081 EMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI 1113
EMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI
Sbjct: 1081 EMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI 1113
>gi|45545409 F-box protein 38 isoform b [Homo sapiens]
Length = 1188
Score = 2097 bits (5434), Expect = 0.0
Identities = 1057/1188 (88%), Positives = 1065/1188 (89%), Gaps = 75/1188 (6%)
Query: 1 MGPRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKL 60
MGPRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKL
Sbjct: 1 MGPRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKL 60
Query: 61 KEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDASFLTLLKKMPDVEQLYGLHPRYLERRRV 120
KEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDASFLTLLKKMPDVEQLYGLHPRYLERRRV
Sbjct: 61 KEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDASFLTLLKKMPDVEQLYGLHPRYLERRRV 120
Query: 121 RGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPE 180
RGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPE
Sbjct: 121 RGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPE 180
Query: 181 NKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMR 240
NKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMR
Sbjct: 181 NKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMR 240
Query: 241 NCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVL 300
NCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVL
Sbjct: 241 NCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVL 300
Query: 301 GACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDE 360
GACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDE
Sbjct: 301 GACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDE 360
Query: 361 FLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWI 420
FLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWI
Sbjct: 361 FLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWI 420
Query: 421 SDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGT 480
SDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGT
Sbjct: 421 SDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGT 480
Query: 481 GIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADA 540
GIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADA
Sbjct: 481 GIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADA 540
Query: 541 LNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSES 600
LNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSES
Sbjct: 541 LNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSES 600
Query: 601 DDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQS 660
DDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQS
Sbjct: 601 DDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQS 660
Query: 661 KQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNT 720
KQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNT
Sbjct: 661 KQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNT 720
Query: 721 ASQSPDFVRTVNSGGSS--------------------------EPSPTEVDVSRQCACSP 754
ASQSPDFVRTVNSGGSS E E V +C C
Sbjct: 721 ASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHR 780
Query: 755 GGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRT------------------------SR 790
D E R C + R S
Sbjct: 781 PQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDERTNGSGSG 840
Query: 791 CSDEERPSTSR--ACVVNGPD-----------------------EVAKTKPRHAMKRKRT 825
+ E+R +S+ +C V + EVAKTKPRHAMKRKRT
Sbjct: 841 ATGEDRRGSSQPESCDVQSNEDYPRRPLTRARSRLSHVLLVSESEVAKTKPRHAMKRKRT 900
Query: 826 ADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLK 885
ADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLK
Sbjct: 901 ADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLK 960
Query: 886 HLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFS 945
HLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFS
Sbjct: 961 HLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFS 1020
Query: 946 GPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFPEATRSEEDLKKYPK 1005
GPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFPEATRSEEDLKKYPK
Sbjct: 1021 GPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFPEATRSEEDLKKYPK 1080
Query: 1006 YPWGREIYTLEGVVDGAPYSMISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQ 1065
YPWGREIYTLEGVVDGAPYSMISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQ
Sbjct: 1081 YPWGREIYTLEGVVDGAPYSMISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQ 1140
Query: 1066 LSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI 1113
LSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI
Sbjct: 1141 LSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI 1188
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 57.4 bits (137), Expect = 7e-08
Identities = 66/328 (20%), Positives = 121/328 (36%), Gaps = 7/328 (2%)
Query: 478 AGTGIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFA 537
+G G SS S+ +SN+ D++ +++ + N+ D SD ++ D + +
Sbjct: 542 SGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNS 601
Query: 538 ADALNEMEDIVQED----GEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSI 593
+D+ + + D + ++S + S + D + + S +S
Sbjct: 602 SDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSN 661
Query: 594 TVHDSESDDEEDSLELQEVWIPKNGT-RRYSEREEKTGESVQSRELSVSGKGKTPLRKRY 652
+ + S+S D DS + N + S + ES S + S S +
Sbjct: 662 SSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNS 721
Query: 653 NSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTV 712
NS S +SS +S+ ++ + D + + D S S+ +S
Sbjct: 722 NSSDSDSSNSSDSSDSSNSSDSSDSSD--SSNSSDSSDSSDSSNSSDSSDSSDSSDSSDS 779
Query: 713 GNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSV 772
NSS N +S S D + NS SS S + + S S+ S + + D+ +S
Sbjct: 780 SNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSS 839
Query: 773 CPRCCCHRPQESQRRTSRCSDEERPSTS 800
S +S SD S S
Sbjct: 840 DSSDSSDSSDGSDSDSSNRSDSSNSSDS 867
Score = 53.5 bits (127), Expect = 1e-06
Identities = 64/360 (17%), Positives = 135/360 (37%), Gaps = 11/360 (3%)
Query: 485 SSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADALNEM 544
S++ S+++SN+ DN+ ++++N D++ + ++ D +++ +
Sbjct: 918 SNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSS 977
Query: 545 EDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDEE 604
+ D ++S +++ + + D + S +S + + S+S D
Sbjct: 978 DSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSS 1037
Query: 605 DSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFP 664
DS + + + S + +S S + S S +S S
Sbjct: 1038 DSSDSSD-----SSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSN 1092
Query: 665 LEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQS 724
+SS +S+ +D + D + + D S S+ +S NSS + +S+S
Sbjct: 1093 SSDSSDSSDSSDSSD--SSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSES 1150
Query: 725 PDFVRTVNSGGSSEPS----PTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHR 780
D + +S SS+ S ++ S + S S+ S++ + D+ S
Sbjct: 1151 SDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDS 1210
Query: 781 PQESQRRTSRCSDEERPSTSRACVVNGPDEVAKTKPRHAMKRKRTADKSTSTSDPVIEDD 840
S S S + S+ + D + ++ ++D S STSD E D
Sbjct: 1211 SDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESD 1270
Score = 51.6 bits (122), Expect = 4e-06
Identities = 66/357 (18%), Positives = 130/357 (36%), Gaps = 14/357 (3%)
Query: 490 SNQNSNNDDNNAQNNNA---NIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMED 546
SN++SN+ D++ +N++ + +N DS +D + + ++D+ N +
Sbjct: 885 SNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDS 944
Query: 547 IVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDEEDS 606
D ++S N++ + + + D + + S +S + S+S D DS
Sbjct: 945 SDSSDSSNSSDSSNSSDSSNSS----DSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDS 1000
Query: 607 LELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLE 666
+ + S + +S S + S S +S S
Sbjct: 1001 SNSSD-----SSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSS 1055
Query: 667 ESSCEKGCQVTSEQI-KADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSP 725
SS +S+ +D + D E + D S S+ +S +SS + +S S
Sbjct: 1056 NSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSS 1115
Query: 726 DFVRTVNSGGSSEPS-PTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQES 784
D + NS SS+ S ++ S + S SE S++ + D+ S S
Sbjct: 1116 DSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSS 1175
Query: 785 QRRTSRCSDEERPSTSRACVVNGPDEVAKTKPRHAMKRKRTADKSTSTSDPVIEDDH 841
S S + S+ + + D + + ++D S S+ D +
Sbjct: 1176 DSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSN 1232
Score = 47.8 bits (112), Expect = 6e-05
Identities = 52/285 (18%), Positives = 108/285 (37%), Gaps = 5/285 (1%)
Query: 485 SSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSD--EENDFRQDLQPGEQQFAADALN 542
SS + NS++ N++ ++N++ ++ D SD + +D + ++D+ +
Sbjct: 1009 SSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSD 1068
Query: 543 EMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDD 602
+ D +ES +++ + + + D + S +S + + S+S D
Sbjct: 1069 SSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSD 1128
Query: 603 EEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQ 662
DS + + + S + +S S + S S +S+ S
Sbjct: 1129 SSDSSDSSDS--SNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDS 1186
Query: 663 FPLEESSCEKGCQVTSEQI-KADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTA 721
+SS +S+ +D + D + + D S S +S +SS + +
Sbjct: 1187 SDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDS 1246
Query: 722 SQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEG 766
S S D + +S S+ S E D + DS++ EG
Sbjct: 1247 SNSSDSSDSSDSSDSTSDSNDESDSQSKSGNGNNNGSDSDSDSEG 1291
Score = 47.4 bits (111), Expect = 8e-05
Identities = 54/294 (18%), Positives = 106/294 (36%), Gaps = 14/294 (4%)
Query: 491 NQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDF--RQDLQPGEQQFAADALNEMEDIV 548
N N+ NDDN+ ++ D++ DS +D D + ++D+ + D
Sbjct: 529 NGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSS 588
Query: 549 QEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDEE---- 604
++S N++ + + D + S + + DS+SD +
Sbjct: 589 DSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSS 648
Query: 605 DSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFP 664
DS + + N + + S S + + NS + S
Sbjct: 649 DSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSS 708
Query: 665 LEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQS 724
+SS + S +D + D + + D S S+ +S +SS + +S S
Sbjct: 709 DSDSS-DSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDS 767
Query: 725 PDFVRTVNSGGSSEPS-------PTEVDVSRQCACSPGGSEDSEAMEEGDAESS 771
D + +S SS S ++ S + S S+ S++ + D++SS
Sbjct: 768 SDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSS 821
Score = 47.0 bits (110), Expect = 1e-04
Identities = 56/279 (20%), Positives = 106/279 (37%), Gaps = 29/279 (10%)
Query: 493 NSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDG 552
N N+D N+ +NN++ + ++ D+S ++N D + E D + D D
Sbjct: 472 NGNDDANSESDNNSSSRGDASYNSDES-KDNGNGSDSKGAED----DDSDSTSDTNNSDS 526
Query: 553 EVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDEEDSLELQEV 612
+GN+ D D+ +G +S + + S+S D DS
Sbjct: 527 NGNGNNGND-----------DNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDS------ 569
Query: 613 WIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEK 672
+ + S+ + +S S + S + +S S +SS K
Sbjct: 570 --DSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNS----SDSSDSSDSSDSSDSSDSSDSK 623
Query: 673 GCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVN 732
SE +D + D + + D + S+ +S NSS + +S S D + +
Sbjct: 624 SDSSKSESDSSDSDSKSDSSD-SNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSD 682
Query: 733 SGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESS 771
S SS+ S + + + S DS++ + D+ +S
Sbjct: 683 SSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNS 721
Score = 47.0 bits (110), Expect = 1e-04
Identities = 54/294 (18%), Positives = 113/294 (38%), Gaps = 17/294 (5%)
Query: 479 GTGIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAA 538
G G A + +S +D NN+ +N N ++ +D ++++D + ++
Sbjct: 502 GNGSDSKGAEDDDSDSTSDTNNSDSN------GNGNNGNDDNDKSDSGKGKSDSSDSDSS 555
Query: 539 DALNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDS 598
D+ N + D + ++S +++ + S D + + S +S + S
Sbjct: 556 DSSNSSDSSDSSDSD-SSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSS 614
Query: 599 ESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMG 658
+S D DS + ++ S+ + +S S S + NS
Sbjct: 615 DSSDSSDS--------KSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSS 666
Query: 659 QSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSH 718
S + S ++ +D + + E + D S SS ++ + ++SS
Sbjct: 667 DSSD-SSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSD 725
Query: 719 NTASQSPDFVRTVNSGGSSEPS-PTEVDVSRQCACSPGGSEDSEAMEEGDAESS 771
+ +S S D + NS SS+ S + S + S S+ S++ + D+ S
Sbjct: 726 SDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDS 779
Score = 42.4 bits (98), Expect = 0.002
Identities = 66/340 (19%), Positives = 115/340 (33%), Gaps = 32/340 (9%)
Query: 494 SNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGE 553
S N D + N N + D+ DDSD +D G D N+ D + +
Sbjct: 492 SYNSDESKDNGNGS--DSKGAEDDDSDSTSDTNNSDSNGNGNNGNDD-NDKSDSGKGKSD 548
Query: 554 VVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDEEDSLELQEVW 613
+++ S + D D + S + DS+S D DS
Sbjct: 549 SSDSDSSDSSNSSDSSDSSDSDSSDSNSS--------SDSDSSDSDSSDSSDS------- 593
Query: 614 IPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKG 673
+ S + +S S + S S K+ K + SK + +S +
Sbjct: 594 --DSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSD-- 649
Query: 674 CQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVNS 733
+D + D + D S S+ +S+ +SS+ + +S S D + S
Sbjct: 650 --------SSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSES 701
Query: 734 GGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSD 793
SS+ S + D S S S DS++ D+ S S S S
Sbjct: 702 SDSSDSS--DSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSS 759
Query: 794 EERPSTSRACVVNGPDEVAKTKPRHAMKRKRTADKSTSTS 833
+ S+ + + D + + ++D S S++
Sbjct: 760 DSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSN 799
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 48.5 bits (114), Expect = 3e-05
Identities = 86/412 (20%), Positives = 150/412 (36%), Gaps = 81/412 (19%)
Query: 506 ANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVVAESGNNTPAH 565
A+ ++ DD DEE+ +Q +Q G + A A + D + + S + P +
Sbjct: 123 ASESSSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKN 182
Query: 566 SQ-AIIPVDVDEEQAGPSGLQRVV------KPTSITVHDSESDDEEDSLELQEVWIPK-- 616
+ I PV V + P R K S + S S +DS E + PK
Sbjct: 183 QKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKKT 242
Query: 617 ----------------NGTRRYSEREEKTGESVQSRELSVSGK----------GKTPLRK 650
TR+ S E+ + + + ++ + K P +K
Sbjct: 243 VPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKK 302
Query: 651 RYNSH--QMGQSKQFPLE--ESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSS 706
+ + KQ P+E E S ++ + E+ K KA K P+ +
Sbjct: 303 SLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAV----VSKATTKPPPAKKA 358
Query: 707 TTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSP----GGSE---- 758
+S+ + S + ++P S++P+ T + + A +P GG +
Sbjct: 359 AESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLT 418
Query: 759 ---DSEAMEEGDAES----------SVCPRCCC---------HRPQESQRRT----SRCS 792
DS + EE + S + P+ PQ S+ + S S
Sbjct: 419 RKADSSSSEEESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSS 478
Query: 793 DEERPSTSRACVVNGPDEV----AKTKPRHAMKRKRTADKSTSTSDPVIEDD 840
+EE TS++ V P +V A +KP A K K + S+S+ D E++
Sbjct: 479 EEEEEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEE 530
Score = 40.4 bits (93), Expect = 0.009
Identities = 53/243 (21%), Positives = 92/243 (37%), Gaps = 23/243 (9%)
Query: 598 SESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELS-----VSGKGKTPLRKRY 652
S+S D + S + + P T+ S + T +S + + V G K RK
Sbjct: 363 SDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKAD 422
Query: 653 NSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKK---NKDVYPSCSSTTA 709
+S +S EE +K V + + KA KAA +P K+ ++D S+++
Sbjct: 423 SSSSEEESSSS--EEEKTKK--MVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSS 478
Query: 710 STVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAE 769
+S + + P V +GG++ P + + + S+DS EE +
Sbjct: 479 EEEEEKTSKSAVKKKPQKV----AGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLK 534
Query: 770 SSVCPRCCCHRPQESQRRTSR-------CSDEERPSTSRACVVNGPDEVAKTKPRHAMKR 822
PR + + T++ +EE A VV+ + K K A K
Sbjct: 535 GKGSPRPQAPKANGTSALTAQNGKAAKNSEEEEEEKKKAAVVVSKSGSLKKRKQNEAAKE 594
Query: 823 KRT 825
T
Sbjct: 595 AET 597
Score = 37.7 bits (86), Expect = 0.061
Identities = 53/253 (20%), Positives = 91/253 (35%), Gaps = 49/253 (19%)
Query: 598 SESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQM 657
+ S D EDS E E EE G + + G P + + +
Sbjct: 82 ASSSDSEDSSE---------------EEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASES 126
Query: 658 GQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSS 717
S++ ++ ++ Q + +K KAA+ P+K K+ D S S
Sbjct: 127 SSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSD---------------SDS 171
Query: 718 HNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCC 777
+++ P + +P T V V Q P + + + G A SS
Sbjct: 172 DSSSEDEPP--------KNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASS------ 217
Query: 778 CHRPQESQRRTSRCSDEERPSTSRACVVNGPDEVAKTKPRHAMKRKRTADKSTSTSDPVI 837
S +S S+EE+ + + V VAK + A R KS+S+ D
Sbjct: 218 --SSSSSSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTR---KSSSSEDSSS 272
Query: 838 EDDHVQVLVLKSK 850
+++ Q +K+K
Sbjct: 273 DEEEEQKKPMKNK 285
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 41.2 bits (95), Expect = 0.006
Identities = 37/154 (24%), Positives = 58/154 (37%), Gaps = 30/154 (19%)
Query: 490 SNQNSNNDDNNAQNNNANIHDNNHHHP-------------DDSDEENDFRQDLQPGEQQF 536
S++ S+ D+ +I + +HH P DDS+EE + +D PG
Sbjct: 440 SHRQSHQDEETGHGQRGSIKEMSHHPPGHTVVKDRSHLRKDDSEEEKEKEED--PGS--- 494
Query: 537 AADALNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVH 596
+E +D E GE G+ + DEE+ L + +
Sbjct: 495 -----HEEDDESSEQGEKGTHHGSRDQEDEE-------DEEEGHGLSLNQEEEEEEDKEE 542
Query: 597 DSESDDEEDSLELQEVWIPKNGTRRYSEREEKTG 630
+ E +DEE E EV P + E EE+ G
Sbjct: 543 EEEEEDEERREERAEVGAPLSPDHSEEEEEEEEG 576
Score = 31.6 bits (70), Expect = 4.4
Identities = 62/311 (19%), Positives = 114/311 (36%), Gaps = 33/311 (10%)
Query: 491 NQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGE-QQFAADALNEMEDIVQ 549
+Q+ ++ A + + H +H H DEE D +D+ Q + + D +
Sbjct: 321 HQDHRKEEVEAVSGEHHHHVPDHRHQGHRDEEED--EDVSTERWHQGPQHVHHGLVDEEE 378
Query: 550 EDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDEEDSLEL 609
E+ E+ + G+ +H D ++ Q + P +DEE S EL
Sbjct: 379 EEEEITVQFGHYVASHQPRGHKSDEEDFQ----DEYKTEVPHHHHHRVPREEDEEVSAEL 434
Query: 610 QEVWIPKNGTRRYSEREEKTGESVQS--RELSVSGKGKTPLRKRYNSHQMGQSKQFPLEE 667
+ + R S ++E+TG + +E+S G T ++ R + + ++ EE
Sbjct: 435 GH----QAPSHRQSHQDEETGHGQRGSIKEMSHHPPGHTVVKDRSHLRKDDSEEEKEKEE 490
Query: 668 --SSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSP 725
S E+ + + + K +RD +++ ++ G+ S N +
Sbjct: 491 DPGSHEEDDESSEQGEKGTHHGSRDQEDEEDEEE-------------GHGLSLNQEEEEE 537
Query: 726 DFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPR-CCCHRPQES 784
+ E +V SP SE+ E EEG E PR P +
Sbjct: 538 EDKEEEEEEEDEERREERAEVG--APLSPDHSEEEEEEEEGLEEDE--PRFTIIPNPLDR 593
Query: 785 QRRTSRCSDEE 795
+ S EE
Sbjct: 594 REEAGGASSEE 604
Score = 30.4 bits (67), Expect = 9.7
Identities = 42/232 (18%), Positives = 83/232 (35%), Gaps = 31/232 (13%)
Query: 509 HDNNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVVAESGNNTPAHSQA 568
H H D+ D +++++ ++ P +ED EV AE G+ P+H Q+
Sbjct: 394 HQPRGHKSDEEDFQDEYKTEV-PHHHHHRVPR--------EEDEEVSAELGHQAPSHRQS 444
Query: 569 IIPVDVDEEQAG--------PSGLQRVVKPTSITVHDSESDDE--------EDSLELQEV 612
+ Q G P G V + + DSE + E E+ E E
Sbjct: 445 HQDEETGHGQRGSIKEMSHHPPGHTVVKDRSHLRKDDSEEEKEKEEDPGSHEEDDESSEQ 504
Query: 613 WIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEK 672
+ GT S +E + + LS++ + + K + + ++ E E
Sbjct: 505 --GEKGTHHGSRDQEDEEDEEEGHGLSLNQEEEEEEDKEEEEEEEDEERR----EERAEV 558
Query: 673 GCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQS 724
G ++ + + + + + E + + P+ G SS + +
Sbjct: 559 GAPLSPDHSEEEEEEEEGLEEDEPRFTIIPNPLDRREEAGGASSEEESGEDT 610
>gi|28372531 protein phosphatase 4, regulatory subunit 2 [Homo
sapiens]
Length = 417
Score = 40.4 bits (93), Expect = 0.009
Identities = 50/223 (22%), Positives = 83/223 (37%), Gaps = 29/223 (13%)
Query: 487 ALVSNQNSNNDDNNAQNNNANIHDNNH-HHPDDSDEENDFR-----QDLQPGEQQFAADA 540
+L + +N + + AN+ N +H D S E++ ++ P E A+
Sbjct: 183 SLSAPMTTNGLPESTDSKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKHPDEDAVEAEG 242
Query: 541 LNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSES 600
++GEV + T S I V V E +A S + H +E
Sbjct: 243 HEVKRLRFDKEGEVRETASQTT---SSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEE 299
Query: 601 DDEEDSLELQEVWI------------PKNGTRRYSEREEKTGESVQSRELSVSGKGKTPL 648
D+EED E +E ++ K + EE + E+ Q E VS K L
Sbjct: 300 DEEEDEEEEEESFMTSREMIPERKNQEKESDDALTVNEETSEENNQMEESDVSQAEKDLL 359
Query: 649 RKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDI 691
H G + P+ SS + C+ T E + ++ +I
Sbjct: 360 ------HSEGSENEGPVSSSSSD--CRETEELVGSNSSKTGEI 394
>gi|62244004 modulator of estrogen induced transcription isoform b
[Homo sapiens]
Length = 1016
Score = 39.7 bits (91), Expect = 0.016
Identities = 92/440 (20%), Positives = 163/440 (37%), Gaps = 85/440 (19%)
Query: 458 ISLDQMFREPPKGCARVGLS---AGTGIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHH 514
+S D ++P KG + + +G A + + N + + Q+ N + D+
Sbjct: 70 VSTDTPNKKPTKGKGKKHEADELSGDASVEDDAFIKDCELENQEAHEQDGNDELKDSEEF 129
Query: 515 HPDDSDEENDFRQDLQPGEQQFAADALNE---MEDIVQED---GEVVAESGNNTPAHSQA 568
+++EEN ++L E+ A L E +EDI +ED E+ A+ G +
Sbjct: 130 --GENEEENVHSKELLSAEENKRAHELIEAEGIEDIEKEDIESQEIEAQEGED----DTF 183
Query: 569 IIPVDVDEEQAGPSGLQRVVKPTS-------ITVHDSESD----------------DEED 605
+ D +EE+ G T+ TV ++E D D +D
Sbjct: 184 LTAQDGEEEENEKEGSLAEADHTAHEEMEAHTTVKEAEDDNISVTIQAEDAITLDFDGDD 243
Query: 606 SLEL--------QEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKT-----PLRKRY 652
LE E PK+G ++ EK + + GK + P+ K
Sbjct: 244 LLETGKNVKITDSEASKPKDGQDAIAQSPEKESKDYEMNANHKDGKKEDCVKGDPVEKEA 303
Query: 653 NSHQMGQSKQFPLEESSCEKGCQVT--SEQIKADMKAARDIPEKKKNKDVYPSCSSTTAS 710
+++ E+ + +KG T S Q K+ K ++D K +KD S SST+ S
Sbjct: 304 RESSK-KAESGDKEKDTLKKGPSSTGASGQAKSSSKESKD--SKTSSKDDKGSTSSTSGS 360
Query: 711 TVGNS-----SSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEE 765
+ ++ S ++ +++ D G + + A SPG
Sbjct: 361 SGSSTKNIWVSGLSSNTKAADLKNLFGKYGKVLSAKVVTN-----ARSPGAKCYGIVTMS 415
Query: 766 GDAESSVCPRCCCH----------------RPQESQRRTSRCSDEERPSTSRACVVNGPD 809
E S RC H + S++ + +DE+ S S N D
Sbjct: 416 SSTEVS---RCIAHLHRTELHGQLISVEKVKGDPSKKEMKKENDEKSSSRSSGDKKNTSD 472
Query: 810 EVAKTKPRHAMKRKRTADKS 829
+KT+ + KR+++KS
Sbjct: 473 RSSKTQASVKKEEKRSSEKS 492
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 38.5 bits (88), Expect = 0.036
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 597 DSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQ 656
DSES EE S + + +P T +E+ G +Q++ S KG P + + Q
Sbjct: 467 DSESSSEESS-DSSDGEVP---TAVAPAQEKSLGNILQAKPTSSPAKGP-PQKAGPVAVQ 521
Query: 657 MGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKK-KNKDVYPSCSSTTASTVGNS 715
+ K ESS E SE+ A M AA+ P K P ++TTAS
Sbjct: 522 VKAEKPMDNSESSEESSDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTAS--AKV 579
Query: 716 SSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAE 769
+ +Q+P T S S P+ + +EDS + EE D+E
Sbjct: 580 APVRVGTQAPRKAGTATSPAGSSPA--------VAGGTQRPAEDSSSSEESDSE 625
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 38.5 bits (88), Expect = 0.036
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 597 DSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQ 656
DSES EE S + + +P T +E+ G +Q++ S KG P + + Q
Sbjct: 544 DSESSSEESS-DSSDGEVP---TAVAPAQEKSLGNILQAKPTSSPAKGP-PQKAGPVAVQ 598
Query: 657 MGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKK-KNKDVYPSCSSTTASTVGNS 715
+ K ESS E SE+ A M AA+ P K P ++TTAS
Sbjct: 599 VKAEKPMDNSESSEESSDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTAS--AKV 656
Query: 716 SSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAE 769
+ +Q+P T S S P+ + +EDS + EE D+E
Sbjct: 657 APVRVGTQAPRKAGTATSPAGSSPA--------VAGGTQRPAEDSSSSEESDSE 702
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 38.5 bits (88), Expect = 0.036
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 597 DSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQ 656
DSES EE S + + +P T +E+ G +Q++ S KG P + + Q
Sbjct: 544 DSESSSEESS-DSSDGEVP---TAVAPAQEKSLGNILQAKPTSSPAKGP-PQKAGPVAVQ 598
Query: 657 MGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKK-KNKDVYPSCSSTTASTVGNS 715
+ K ESS E SE+ A M AA+ P K P ++TTAS
Sbjct: 599 VKAEKPMDNSESSEESSDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTAS--AKV 656
Query: 716 SSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAE 769
+ +Q+P T S S P+ + +EDS + EE D+E
Sbjct: 657 APVRVGTQAPRKAGTATSPAGSSPA--------VAGGTQRPAEDSSSSEESDSE 702
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b
[Homo sapiens]
Length = 1411
Score = 38.5 bits (88), Expect = 0.036
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 597 DSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQ 656
DSES EE S + + +P T +E+ G +Q++ S KG P + + Q
Sbjct: 467 DSESSSEESS-DSSDGEVP---TAVAPAQEKSLGNILQAKPTSSPAKGP-PQKAGPVAVQ 521
Query: 657 MGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKK-KNKDVYPSCSSTTASTVGNS 715
+ K ESS E SE+ A M AA+ P K P ++TTAS
Sbjct: 522 VKAEKPMDNSESSEESSDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTAS--AKV 579
Query: 716 SSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAE 769
+ +Q+P T S S P+ + +EDS + EE D+E
Sbjct: 580 APVRVGTQAPRKAGTATSPAGSSPA--------VAGGTQRPAEDSSSSEESDSE 625
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
[Homo sapiens]
Length = 1450
Score = 38.5 bits (88), Expect = 0.036
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 597 DSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQ 656
DSES EE S + + +P T +E+ G +Q++ S KG P + + Q
Sbjct: 544 DSESSSEESS-DSSDGEVP---TAVAPAQEKSLGNILQAKPTSSPAKGP-PQKAGPVAVQ 598
Query: 657 MGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKK-KNKDVYPSCSSTTASTVGNS 715
+ K ESS E SE+ A M AA+ P K P ++TTAS
Sbjct: 599 VKAEKPMDNSESSEESSDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTAS--AKV 656
Query: 716 SSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAE 769
+ +Q+P T S S P+ + +EDS + EE D+E
Sbjct: 657 APVRVGTQAPRKAGTATSPAGSSPA--------VAGGTQRPAEDSSSSEESDSE 702
>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
[Homo sapiens]
Length = 958
Score = 38.5 bits (88), Expect = 0.036
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 597 DSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQ 656
DSES EE S + + +P T +E+ G +Q++ S KG P + + Q
Sbjct: 544 DSESSSEESS-DSSDGEVP---TAVAPAQEKSLGNILQAKPTSSPAKGP-PQKAGPVAVQ 598
Query: 657 MGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKK-KNKDVYPSCSSTTASTVGNS 715
+ K ESS E SE+ A M AA+ P K P ++TTAS
Sbjct: 599 VKAEKPMDNSESSEESSDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTAS--AKV 656
Query: 716 SSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAE 769
+ +Q+P T S S P+ + +EDS + EE D+E
Sbjct: 657 APVRVGTQAPRKAGTATSPAGSSPA--------VAGGTQRPAEDSSSSEESDSE 702
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 38.1 bits (87), Expect = 0.047
Identities = 80/384 (20%), Positives = 142/384 (36%), Gaps = 42/384 (10%)
Query: 517 DDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDE 576
+DSD+ ++ P Q A D +E ++ ED G ++ S++ +E
Sbjct: 138 EDSDDTIQASEESAPQGQDSAQDTTSESRELDNEDRVDSKPEGGDSTQESES------EE 191
Query: 577 EQAGPSGLQRVVKPTSITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSR 636
G S SE DDE + E + G R + K+ ES ++
Sbjct: 192 HWVGGGS-----DGESSHGDGSELDDEGMQSDDPESIRSERGNSRMNSAGMKSKESGENS 246
Query: 637 ELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKADM---KAARDI-- 691
E + + + S ++ + + E+ E T E++K+D +RD
Sbjct: 247 EQANTQDSGGSQLLEHPSRKIFRKSRISEEDDRSELDDNNTMEEVKSDSTENSNSRDTGL 306
Query: 692 ------------PEKKKNKDVYPSCS----STTASTVGNSSSHNTASQSPDFVRTVNSGG 735
+ K+N S + S+ +S N SS +S+S + V + + G
Sbjct: 307 SQPRRDSKGDSQEDSKENLSQEESQNVDGPSSESSQEANLSSQENSSESQEEVVSESRGD 366
Query: 736 SSEPSPTEV------DVSRQCACSPGGSEDSEAMEE-GDAESSVCPRCCCHRPQESQRRT 788
+ +P+ + V D S + + SE+ EE D+ESS P ES
Sbjct: 367 NPDPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESP-ESPEDE 425
Query: 789 SRCSDEERPSTSRACVVNGPDEVAKTKPRHAMKRKRTADKSTSTSDPVI--EDDHVQVLV 846
+ S E S S + + ++ + R+ + S ST ED ++ +
Sbjct: 426 NSSSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEEDGQLKNIE 485
Query: 847 LKSKNLVGVTMTNCGITDLVLKDC 870
++S+ L N I D DC
Sbjct: 486 IESRKLTVDAYHNKPIGDQDDNDC 509
>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
precursor [Homo sapiens]
Length = 497
Score = 38.1 bits (87), Expect = 0.047
Identities = 80/384 (20%), Positives = 142/384 (36%), Gaps = 42/384 (10%)
Query: 517 DDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDE 576
+DSD+ ++ P Q A D +E ++ ED G ++ S++ +E
Sbjct: 122 EDSDDTIQASEESAPQGQDSAQDTTSESRELDNEDRVDSKPEGGDSTQESES------EE 175
Query: 577 EQAGPSGLQRVVKPTSITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSR 636
G S SE DDE + E + G R + K+ ES ++
Sbjct: 176 HWVGGGS-----DGESSHGDGSELDDEGMQSDDPESIRSERGNSRMNSAGMKSKESGENS 230
Query: 637 ELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKADM---KAARDI-- 691
E + + + S ++ + + E+ E T E++K+D +RD
Sbjct: 231 EQANTQDSGGSQLLEHPSRKIFRKSRISEEDDRSELDDNNTMEEVKSDSTENSNSRDTGL 290
Query: 692 ------------PEKKKNKDVYPSCS----STTASTVGNSSSHNTASQSPDFVRTVNSGG 735
+ K+N S + S+ +S N SS +S+S + V + + G
Sbjct: 291 SQPRRDSKGDSQEDSKENLSQEESQNVDGPSSESSQEANLSSQENSSESQEEVVSESRGD 350
Query: 736 SSEPSPTEV------DVSRQCACSPGGSEDSEAMEE-GDAESSVCPRCCCHRPQESQRRT 788
+ +P+ + V D S + + SE+ EE D+ESS P ES
Sbjct: 351 NPDPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESP-ESPEDE 409
Query: 789 SRCSDEERPSTSRACVVNGPDEVAKTKPRHAMKRKRTADKSTSTSDPVI--EDDHVQVLV 846
+ S E S S + + ++ + R+ + S ST ED ++ +
Sbjct: 410 NSSSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEEDGQLKNIE 469
Query: 847 LKSKNLVGVTMTNCGITDLVLKDC 870
++S+ L N I D DC
Sbjct: 470 IESRKLTVDAYHNKPIGDQDDNDC 493
>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
Length = 1163
Score = 38.1 bits (87), Expect = 0.047
Identities = 47/192 (24%), Positives = 70/192 (36%), Gaps = 22/192 (11%)
Query: 615 PKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGC 674
PK + E+ + + S ++S GK K K + ++ +SK+ P E G
Sbjct: 737 PKGEKKNVPEKHTREAQKQASEKVSNKGKRK---HKNEDDNRASESKK-PKTEDKNSAGH 792
Query: 675 QVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTAST---VGNSSSHNTASQSPDFVRTV 731
+ +S + + AA K KD+ PS + S + S T SQS +
Sbjct: 793 KPSSNRESSKQSAA-------KEKDLLPSPAGPVPSKDPKTEHGSRKRTISQSSSLKSSS 845
Query: 732 NS-----GGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQR 786
NS G S S T + S S E E+ + SS CP R
Sbjct: 846 NSNKETSGSSKNSSSTSKQKKTEGKTS---SSSKEVKEKAPSSSSNCPPSAPTLDSSKPR 902
Query: 787 RTSRCSDEERPS 798
RT D+ S
Sbjct: 903 RTKLVFDDRNYS 914
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 37.7 bits (86), Expect = 0.061
Identities = 65/310 (20%), Positives = 123/310 (39%), Gaps = 56/310 (18%)
Query: 522 ENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVV----------AESGNNTPAHSQAIIP 571
E++ +QD QP E + + ++ ++ D EV+ +E+ + +
Sbjct: 374 ESEKQQDSQPEEVMDVLEMVENVKHVIA-DQEVMETNRVESVEPSENEASKELEPEMEFE 432
Query: 572 VDVDEEQAGPSGLQRVVKPTSITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGE 631
++ D+E S + V + E +++E + + V P+ ++ + + ++
Sbjct: 433 IEPDKECKSLSPGKENVSALDMEKESEEKEEKESEPQPEPVAQPQPQSQPQLQLQSQSQP 492
Query: 632 SVQSR------ELSVSGKGKTPLRKRYNSHQMGQSKQFPLE-----ESSCEKGCQVTSEQ 680
+QS+ +LS++ TP + H + + K FP+E E E V E
Sbjct: 493 VLQSQPPSQPEDLSLAVLQPTPQVTQEQGHLLPERKDFPVESVKLTEVPVEPVLTVHPES 552
Query: 681 IKADMKA-------ARDIPEKKKNKDVYPSCSS---TTASTVGNSSSHNTASQSPDFVRT 730
K+ K AR+ K +++ S SS T++S+ +SSS +++S+S
Sbjct: 553 -KSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRS------ 605
Query: 731 VNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSR 790
SS S T SR + S S +S + G R R+ R
Sbjct: 606 ----SSSSSSSTSGSSSRDSSSSTSSSSESRSRSRG-------------RGHNRDRKHRR 648
Query: 791 CSDEERPSTS 800
D +R TS
Sbjct: 649 SVDRKRRDTS 658
>gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo
sapiens]
Length = 373
Score = 37.4 bits (85), Expect = 0.080
Identities = 41/202 (20%), Positives = 81/202 (40%), Gaps = 27/202 (13%)
Query: 510 DNNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVVAESGNNTPAHSQAI 569
D + +D D+E D +D E + A+ L ME +Q ES NN Q
Sbjct: 81 DGDGEDEEDVDDEEDVDEDAHDSEAKVAS--LRGME--LQGCASTQVESENNQEEQKQVR 136
Query: 570 IP-----------VDVDEEQAGPSGLQRVVKPTSITVHDSESDDEED----SLELQEVWI 614
+P + ++E+ L+ + + E ++ E + E + W+
Sbjct: 137 LPESRLTPWEVWFIGKEKEERDRLQLKALEELNQQLEKRKEMEEREKRKIIAEEKHKEWV 196
Query: 615 PKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGC 674
K ++ ERE+K + ++ K L K Y + + Q L++ + E+ C
Sbjct: 197 QKKNEQKRKEREQKINKEMEE-------KAAKELEKEYLQEKAKEKYQEWLKKKNAEE-C 248
Query: 675 QVTSEQIKADMKAARDIPEKKK 696
+ ++ + + + +I EKK+
Sbjct: 249 ERKKKEKEKEKQQQAEIQEKKE 270
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 37.4 bits (85), Expect = 0.080
Identities = 70/321 (21%), Positives = 113/321 (35%), Gaps = 64/321 (19%)
Query: 517 DDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDE 576
D S E Q +P + ++ LN Q + SG+ + + + + +
Sbjct: 1481 DSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRE-----RSGSESSVDQKTVARTPLGQ 1535
Query: 577 EQAGPSGLQRVVKPTSITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSR 636
S + VKP++ SESD DS K TR + ++G S +
Sbjct: 1536 RSRSGSSQELDVKPSASPQERSESDSSPDS---------KAKTRTPLRQRSRSGSSPE-- 1584
Query: 637 ELSVSGKGK-TPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKK 695
V K + +P R R S + K P + G +S + KA A R +P +
Sbjct: 1585 ---VDSKSRLSPRRSRSGSSP--EVKDKPRAAPRAQSGSD-SSPEPKA--PAPRALPRRS 1636
Query: 696 KNKDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPG 755
++ S S + SSS ++ + P RT G S P P
Sbjct: 1637 RS----GSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEP-------------- 1678
Query: 756 GSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDEVAKTK 815
+S PR R R +R S R ++S P+ ++T
Sbjct: 1679 -----------KTKSRTPPRRRSSRSSPELTRKARLSRRSRSASS------SPETRSRTP 1721
Query: 816 PRH----AMKRKRTADKSTST 832
PRH ++ A+KS S+
Sbjct: 1722 PRHRRSPSVSSPEPAEKSRSS 1742
Score = 37.0 bits (84), Expect = 0.10
Identities = 39/186 (20%), Positives = 69/186 (37%), Gaps = 9/186 (4%)
Query: 624 EREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKA 683
ER + S S S S + +S + P++ K + K
Sbjct: 2529 ERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKE 2588
Query: 684 DMKAARD---IPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPS 740
++ R P K+K + S SS+++S+ +SSS +++S S + +S SS S
Sbjct: 2589 AVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2648
Query: 741 PTEVDVSRQCACSPGG------SEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDE 794
P+ Q P E +S R + P E +R + + S
Sbjct: 2649 PSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPR 2708
Query: 795 ERPSTS 800
++ S+S
Sbjct: 2709 DQQSSS 2714
Score = 36.2 bits (82), Expect = 0.18
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 698 KDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGS 757
K+ S SS+++S+ +SSS +++S S + +S GSS P EV + R + +P
Sbjct: 2528 KERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPA-- 2585
Query: 758 EDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDEVAKTKPR 817
EA+ EG P + +RR+S S S+S + + + +
Sbjct: 2586 -PKEAVREGRPPEPT--------PAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2636
Query: 818 HAMKRKRTADKSTSTSDP 835
+ ++ S S + P
Sbjct: 2637 SSSSSSSSSSSSPSPAKP 2654
Score = 32.3 bits (72), Expect = 2.6
Identities = 49/236 (20%), Positives = 78/236 (33%), Gaps = 24/236 (10%)
Query: 615 PKNGTRRYSEREEKTGESVQSRELSVSG------------KGKTPLRKRYNSHQMGQSKQ 662
PK R R ++G S + R S G K +T R +S + +
Sbjct: 1624 PKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSR 1683
Query: 663 FPLEESSCEKGCQVTSE-QIKADMKAARDIPEKKKNKDVY----PSCSSTTASTVGNSSS 717
P S ++T + ++ ++A PE + PS SS + SS
Sbjct: 1684 TPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSR 1743
Query: 718 HNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCC 777
++ SP T G S P P + SR + G ++S+
Sbjct: 1744 RRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQST------ 1797
Query: 778 CHRPQESQRRTSRCSDEERPSTSRACVVNGPDEVAKTKPRHAMKRKRTADKSTSTS 833
R ++ R SR + R + E ++T R R RT S S
Sbjct: 1798 -SRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRS 1852
>gi|116256485 chromosome 6 open reading frame 10 [Homo sapiens]
Length = 563
Score = 36.6 bits (83), Expect = 0.14
Identities = 52/255 (20%), Positives = 100/255 (39%), Gaps = 31/255 (12%)
Query: 469 KGCARVG-LSAGTGIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQ 527
K C+++ L G ++ N+ + +D N+ ++ + P+ + D +
Sbjct: 226 KSCSKIQILKCGGTARSQNSREENKEALKNDIIFTNSVESLKSAHIKEPEREGKGTDLEK 285
Query: 528 DLQPGEQQFAADA-----------LNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDE 576
D E + +DA ++EM I Q G + +S ++ P ++ +
Sbjct: 286 DKIGMEVKVDSDAGIPKRQETQLKISEMS-IPQGQGAQIKKSVSDVPRGQESQVK---KS 341
Query: 577 EQAGPSGLQRVVKPTSITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSR 636
E P G + V + + V + E +E E+ +P+ R+E + QS
Sbjct: 342 ESGVPKGQEAQVTKSGLVVLKGQ----EAQVEKSEMGVPR--------RQESQVKKSQS- 388
Query: 637 ELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKK 696
VS + ++KR + GQ Q E KG + E+ +AD+ +++ EKK
Sbjct: 389 --GVSKGQEAQVKKRESVVLKGQEAQVEKSELKVPKGQEGQVEKTEADVPKEQEVQEKKS 446
Query: 697 NKDVYPSCSSTTAST 711
V S +T
Sbjct: 447 EAGVLKGPESQVKNT 461
>gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]
Length = 1909
Score = 36.2 bits (82), Expect = 0.18
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 667 ESSCEKGCQVTSE-------QIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHN 719
+ SC G ++++ +IKADM+ +D K+ N+++ A +V S
Sbjct: 1651 QGSCLIGSSISTQGNHKKNMKIKADMEVPKDSLVKEANENLQEDEDDAVADSVFQSHIIE 1710
Query: 720 TASQSPDFVRTVNSGGSSEPSPTEVDVSR-QCACSPGGSEDSEAMEEGDAESSVCPRCCC 778
+ Q +RT++SG + P P + S + C P ED+E + + S
Sbjct: 1711 SNCQ----MRTLDSGIGTFPLPDSGNRSTGRYLCQPDSPEDAEPLLPLQSALSAVSSM-- 1764
Query: 779 HRPQESQRRTSRCSDEERPSTS 800
R Q +R +D +RP+ S
Sbjct: 1765 -RAQTLEREVPSSTDGQRPADS 1785
Score = 30.8 bits (68), Expect = 7.5
Identities = 75/403 (18%), Positives = 142/403 (35%), Gaps = 57/403 (14%)
Query: 486 SALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADALNEME 545
S L N++ ++ +++ ++++ +N H S E + L G + L +
Sbjct: 1103 SFLGVNESPSSQVSSSSSSSSPAKSHNSPHGCQSAHEKGLKTRLPVGLK-----VLMKSP 1157
Query: 546 DIVQEDGEVVAESGN---NTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDD 602
++++ V + N + S + E+ P+ ++ ++T+ DS++
Sbjct: 1158 QLLRKSSTVPGKHEKDSLNEASKSSVAVNKSKPEDSKNPASMEITAGERNVTLPDSQAQG 1217
Query: 603 E-EDSLELQE-VWIPKNGTRRYSEREEKTGESVQSRELSVS--------GKGKTPLRKRY 652
D L L+ + P + S+ + R LS S G R
Sbjct: 1218 SLADGLPLETALQEPLESSIPGSDGRDGVDNRSMRRSLSSSKPHLKPALGMNGAKARSHS 1277
Query: 653 NSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTA-ST 711
S G P E S + Q+ + + R + + + PS + +
Sbjct: 1278 FSTHSGDKPSTPPIEGSGKVRTQIITNTAERGNSLTRQNSSTESSPNKAPSAPMLESLPS 1337
Query: 712 VGNSSSHNTASQSPDFVRTVNSGGS-----SEPS--PTEVDVSRQCACSPGGSEDSEAME 764
VG S H ++ + ++ S GS PS P + + P G ED +A
Sbjct: 1338 VGRPSGHPSSGKG-----SLGSSGSFSSQHGSPSKLPLRIPPKSEGLLIPPGKEDQQAFT 1392
Query: 765 EGDAESS-------------VCP--RCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPD 809
+G+ S+ CP C +S RT S E STS+
Sbjct: 1393 QGECPSANVAVLGEPGSDRRSCPPTPTDCPEALQSPGRTQHPSTFETSSTSK-------- 1444
Query: 810 EVAKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNL 852
+T RH TA + S+ P+ +V++ +N+
Sbjct: 1445 --LETSGRHP-DASATATDAVSSEAPLSPTIEEKVMLCIQENV 1484
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 36.2 bits (82), Expect = 0.18
Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 35/255 (13%)
Query: 615 PKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGC 674
P+ ++R + + + + ++ S G P S S + P ++ S +G
Sbjct: 280 PRASSKRPATADSPKPSAKKQKKSSSKGSRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGE 339
Query: 675 QVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSPDF------- 727
+V +E + K A ++ E+ ++D S + S+ NSSS + +S DF
Sbjct: 340 KVKAESEPREAKKALEV-EESNSEDEASFKSESAQSSPSNSSSSSDSSSDSDFEPSQNHS 398
Query: 728 ---VRTVNSGGSSEPSPTEVDVSRQCAC---SPGGSED---SEAMEEGDAESSVCPRCCC 778
+R++ SE S + S + A +PG S++ + A+SS+ P
Sbjct: 399 QGPLRSMVEDLQSEESDEDDSSSGEEAAGKTNPGRDSRLSFSDSESDNSADSSL-PSREP 457
Query: 779 HRPQESQRRTSRCSDEERPSTSRACVVNGPDEVAKTKPRHAMKRKRTADKSTSTSDPVIE 838
PQ+ S+ S P + +KP +K K T DK + +D ++E
Sbjct: 458 PPPQKPPPPNSKVSGRRSPESC-------------SKPEKILK-KGTYDK--AYTDELVE 501
Query: 839 DDHVQVLVLKSKNLV 853
H +++ L+ +N++
Sbjct: 502 -LHRRLMALRERNVL 515
>gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 36.2 bits (82), Expect = 0.18
Identities = 40/134 (29%), Positives = 54/134 (40%), Gaps = 22/134 (16%)
Query: 703 SC-SSTTASTVGNSSSHNTAS----QSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGS 757
SC SS T+ST N S T+S QS T S SSE S T C+C G+
Sbjct: 41 SCQSSGTSSTSCNWQSSRTSSTCSCQSSGTSSTSCSCQSSETSST-------CSCQSSGT 93
Query: 758 EDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDEVAKTKPR 817
+ + SS CCC + S S C STS +C + ++T
Sbjct: 94 SSTSCSWQFSRTSST---CCCQSSRTSSTSCS-CQSSRTSSTSCSC------QSSRTSST 143
Query: 818 HAMKRKRTADKSTS 831
+ + RT+ S S
Sbjct: 144 CSCQTSRTSSTSCS 157
Score = 32.7 bits (73), Expect = 2.0
Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 13/111 (11%)
Query: 703 SCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEA 762
+CS ++ T S S ++ S + S+ S S C+C G+ +
Sbjct: 235 TCSCQSSGTSSTSCSWQSSRTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSC 294
Query: 763 MEEGDAESSVC---------PRCCCHRPQESQRRTSRCSDEERPSTSRACV 804
+ SS C C C +S R +S CS + ++S +C+
Sbjct: 295 SCQSSRTSSTCSCQFSRTSSTSCSC----QSSRTSSTCSCQSSGTSSTSCI 341
Score = 30.4 bits (67), Expect = 9.7
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 17/112 (15%)
Query: 703 SCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPT--EVDVSRQCACSPGGSEDS 760
+CS ++ T +S+S++ S + S G+S S + S C+C G+ +
Sbjct: 189 TCSCQSSGT--SSTSYSCQSSGTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSST 246
Query: 761 EAMEEGDAESSVC---------PRCCCHRPQESQRRTSRCSDEERPSTSRAC 803
+ SS C C C +S +S CS + ++S +C
Sbjct: 247 SCSWQSSRTSSTCSCQSSGTSSTSCSC----QSSGTSSTCSCQSSGTSSTSC 294
>gi|122937227 U2-associated SR140 protein [Homo sapiens]
Length = 1029
Score = 36.2 bits (82), Expect = 0.18
Identities = 56/255 (21%), Positives = 93/255 (36%), Gaps = 46/255 (18%)
Query: 597 DSESDDEED--SLELQEVWIPKNGTR---------RYSEREEKTGESVQSRELSVSG--- 642
+ ES+DEED S + +E + N + +YSE E+ ++ EL V
Sbjct: 797 EEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEKRAKLREIELKVMKFQD 856
Query: 643 ---KGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKD 699
GK P + + + + + L + EK + E+ K D + + KK KD
Sbjct: 857 ELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRSKDKKEKD 916
Query: 700 VYPSCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSED 759
C+ T H+T+ PSP+ R+ SE
Sbjct: 917 ---ECTPTRKE---RKRRHSTS-----------------PSPSRSSSGRRVKSPSPKSER 953
Query: 760 SEAMEEGDAESSVCPRCCCHRPQESQRRT------SRCSDEERPSTSRACVVNGPDEVAK 813
SE E ESS P++ ++ SR R S SR+ +G ++
Sbjct: 954 SERSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQ 1013
Query: 814 TKPRHAMKRKRTADK 828
++ H +K +K
Sbjct: 1014 SRSPHRSHKKSKKNK 1028
>gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens]
Length = 1226
Score = 36.2 bits (82), Expect = 0.18
Identities = 77/396 (19%), Positives = 141/396 (35%), Gaps = 63/396 (15%)
Query: 484 VSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADALNE 543
+ + L ++++S D A DNN D + R DL E+Q ++ L E
Sbjct: 617 ILNGLQASESSAEDSEQEDERGAQDMDNNGKEESKIDHLTNNRNDLISKEEQNSSSLLEE 676
Query: 544 MEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDE 603
H+ +I V + P L++ I V ++D E
Sbjct: 677 ------------------NKVHADLVISKPVSK---SPERLRK-----DIEVLSEDTDYE 710
Query: 604 EDSLELQEVWIPKNGTRRYSEREEKTGES--VQSRELSVSGKGKTPLRKRYNSHQMGQSK 661
ED + + + K+ T + S+ + K G+ + E +G +P +K + ++K
Sbjct: 711 EDEVTKKRKDVKKDTTDKSSKPQIKRGKRRYCNTEECLKTG---SPGKK----EEKAKNK 763
Query: 662 QFPLEESSCEKGCQVTSEQIKADM---KAARDIPEKKKNKDV------YPSCSSTTASTV 712
+ E+S E+ KA M K + EK+K+ + + +
Sbjct: 764 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKRKSLRTTGFYSGFSEVAEKRIKLL 823
Query: 713 GNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSV 772
NS S++ D +S P T ++ S A EEG AE S+
Sbjct: 824 NNSDERLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEAAASPPHPAPEEGVAEESL 883
Query: 773 ---------CPRCCCHRP-------QESQRRTSRCSDE--ERPSTSRACVVNGPDEVAKT 814
P +P + + +T +D E PS+ V+N P ++
Sbjct: 884 QTVAEEESCSPSVELEKPPPVNVDSKPIEEKTVEVNDRKAEFPSSGSNSVLNTPPTTPES 943
Query: 815 KPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSK 850
+ S + S+P+ + +V +KS+
Sbjct: 944 PSSVTVTEGSRQQSSVTVSEPLAPNQE-EVRSIKSE 978
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 36.2 bits (82), Expect = 0.18
Identities = 77/396 (19%), Positives = 141/396 (35%), Gaps = 63/396 (15%)
Query: 484 VSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADALNE 543
+ + L ++++S D A DNN D + R DL E+Q ++ L E
Sbjct: 703 ILNGLQASESSAEDSEQEDERGAQDMDNNGKEESKIDHLTNNRNDLISKEEQNSSSLLEE 762
Query: 544 MEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDE 603
H+ +I V + P L++ I V ++D E
Sbjct: 763 ------------------NKVHADLVISKPVSK---SPERLRK-----DIEVLSEDTDYE 796
Query: 604 EDSLELQEVWIPKNGTRRYSEREEKTGES--VQSRELSVSGKGKTPLRKRYNSHQMGQSK 661
ED + + + K+ T + S+ + K G+ + E +G +P +K + ++K
Sbjct: 797 EDEVTKKRKDVKKDTTDKSSKPQIKRGKRRYCNTEECLKTG---SPGKK----EEKAKNK 849
Query: 662 QFPLEESSCEKGCQVTSEQIKADM---KAARDIPEKKKNKDV------YPSCSSTTASTV 712
+ E+S E+ KA M K + EK+K+ + + +
Sbjct: 850 ESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKRKSLRTTGFYSGFSEVAEKRIKLL 909
Query: 713 GNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSV 772
NS S++ D +S P T ++ S A EEG AE S+
Sbjct: 910 NNSDERLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEAAASPPHPAPEEGVAEESL 969
Query: 773 ---------CPRCCCHRP-------QESQRRTSRCSDE--ERPSTSRACVVNGPDEVAKT 814
P +P + + +T +D E PS+ V+N P ++
Sbjct: 970 QTVAEEESCSPSVELEKPPPVNVDSKPIEEKTVEVNDRKAEFPSSGSNSVLNTPPTTPES 1029
Query: 815 KPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSK 850
+ S + S+P+ + +V +KS+
Sbjct: 1030 PSSVTVTEGSRQQSSVTVSEPLAPNQE-EVRSIKSE 1064
>gi|51873034 F-box and leucine-rich repeat protein 9 [Homo sapiens]
Length = 223
Score = 35.8 bits (81), Expect = 0.23
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 387 ITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWISDHSRWTRLVDINLVRCHAL---KLD 443
+TD G+ AV +++LA+ +C L + W S W RL +NL C L LD
Sbjct: 113 LTDNGLVAVARGCPSLEHLALSHCSRLSDK-GWAQAASSWPRLQHLNLSSCSQLIEQTLD 171
Query: 444 SFGQFIELLPSLE 456
+ GQ L L+
Sbjct: 172 AIGQACRQLRVLD 184
>gi|16306591 F-box and leucine-rich repeat protein 9 [Homo sapiens]
Length = 223
Score = 35.8 bits (81), Expect = 0.23
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 387 ITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWISDHSRWTRLVDINLVRCHAL---KLD 443
+TD G+ AV +++LA+ +C L + W S W RL +NL C L LD
Sbjct: 113 LTDNGLVAVARGCPSLEHLALSHCSRLSDK-GWAQAASSWPRLQHLNLSSCSQLIEQTLD 171
Query: 444 SFGQFIELLPSLE 456
+ GQ L L+
Sbjct: 172 AIGQACRQLRVLD 184
>gi|116875765 tight junction protein 1 isoform b [Homo sapiens]
Length = 1668
Score = 35.4 bits (80), Expect = 0.30
Identities = 72/285 (25%), Positives = 109/285 (38%), Gaps = 39/285 (13%)
Query: 585 QRVVKPTSITVHDSESDDEEDSLELQEVWIPKNG----TRRYSEREEKTGESVQSRELSV 640
++V P S + SD+EEDS + +E+ P++G R SE+ S SRE S+
Sbjct: 110 KKVQIPVSRPDPEPVSDNEEDSYD-EEIHDPRSGRSGVVNRRSEKIWPRDRSA-SRERSL 167
Query: 641 SGKGKTPLRKRYNSHQMGQSKQFPLEES--SCEKGCQVTS----EQIKADMKAARD--IP 692
S + R+ S Q + + L +S + E G ++ S ++I D AARD I
Sbjct: 168 SPRSD---RRSVASSQPAKPTKVTLVKSRKNEEYGLRLASHIFVKEISQDSLAARDGNIQ 224
Query: 693 EK----KKNKDVYPSCSSTTASTVGNSSSHN-----------TASQSPDFVRTVNSGGSS 737
E K N V + S T A T+ S T PD +++S +S
Sbjct: 225 EGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDERATLLNVPDLSDSIHSANAS 284
Query: 738 EPSPTEVDVSRQCACSPGGSEDS---EAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDE 794
E ++ + G S D + + S H PQ+ + R DE
Sbjct: 285 ERDDIS-EIQSLASDHSGRSHDRPPRRSRSRSPDQRSEPSDHSRHSPQQPSNGSLRSRDE 343
Query: 795 ER---PSTSRACVVNGPDEVAKTKPRHAMKRKRTADKSTSTSDPV 836
ER P V + D KT ++R S PV
Sbjct: 344 ERISKPGAVSTPVKHADDHTPKTVEEVTVERNEKQTPSLPEPKPV 388
>gi|116875767 tight junction protein 1 isoform a [Homo sapiens]
Length = 1748
Score = 35.4 bits (80), Expect = 0.30
Identities = 72/285 (25%), Positives = 109/285 (38%), Gaps = 39/285 (13%)
Query: 585 QRVVKPTSITVHDSESDDEEDSLELQEVWIPKNG----TRRYSEREEKTGESVQSRELSV 640
++V P S + SD+EEDS + +E+ P++G R SE+ S SRE S+
Sbjct: 110 KKVQIPVSRPDPEPVSDNEEDSYD-EEIHDPRSGRSGVVNRRSEKIWPRDRSA-SRERSL 167
Query: 641 SGKGKTPLRKRYNSHQMGQSKQFPLEES--SCEKGCQVTS----EQIKADMKAARD--IP 692
S + R+ S Q + + L +S + E G ++ S ++I D AARD I
Sbjct: 168 SPRSD---RRSVASSQPAKPTKVTLVKSRKNEEYGLRLASHIFVKEISQDSLAARDGNIQ 224
Query: 693 EK----KKNKDVYPSCSSTTASTVGNSSSHN-----------TASQSPDFVRTVNSGGSS 737
E K N V + S T A T+ S T PD +++S +S
Sbjct: 225 EGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDERATLLNVPDLSDSIHSANAS 284
Query: 738 EPSPTEVDVSRQCACSPGGSEDS---EAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDE 794
E ++ + G S D + + S H PQ+ + R DE
Sbjct: 285 ERDDIS-EIQSLASDHSGRSHDRPPRRSRSRSPDQRSEPSDHSRHSPQQPSNGSLRSRDE 343
Query: 795 ER---PSTSRACVVNGPDEVAKTKPRHAMKRKRTADKSTSTSDPV 836
ER P V + D KT ++R S PV
Sbjct: 344 ERISKPGAVSTPVKHADDHTPKTVEEVTVERNEKQTPSLPEPKPV 388
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,707,358
Number of Sequences: 37866
Number of extensions: 2100666
Number of successful extensions: 7697
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 7387
Number of HSP's gapped (non-prelim): 422
length of query: 1113
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1000
effective length of database: 13,968,660
effective search space: 13968660000
effective search space used: 13968660000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.