SR140 2542

Name: SR140	Sequence: fasta or formatted (1029aa)		NCBI GI: 122937227
Description: U2-associated SR140 protein		Referenced in: Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 52 3 C cysteine 0.8 8 1 D aspartate 5.8 60 3 E glutamate 11.7 120 4 F phenylalanine 3.5 36 2 G glycine 4.2 43 2 H histidine 2.2 23 2 I isoleucine 3.8 39 2 K lysine 10.5 108 3 L leucine 6.9 71 2 M methionine 2.6 27 2 N asparagine 4.3 44 2 P proline 7.4 76 4 Q glutamine 3.2 33 1 R arginine 7.8 80 2 S serine 10.5 108 3 T threonine 3.6 37 2 V valine 3.5 36 2 W tryptophan 0.9 9 1 Y tyrosine 1.8 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 U2-associated SR140 protein PRPF38B 0.032 PRP38 pre-mRNA processing factor 38 (yeast) domain ... SFRS12 0.030 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.030 splicing factor, arginine/serine-rich 12 isoform b [... SON 0.029 SON DNA-binding protein isoform F SON 0.029 SON DNA-binding protein isoform B SFRS4 0.029 splicing factor, arginine/serine-rich 4 LOC100286959 0.028 PREDICTED: hypothetical protein XP_002343921 NEFH 0.028 neurofilament, heavy polypeptide 200kDa LOC100170229 0.027 hypothetical protein LOC100170229 ZRANB2 0.026 zinc finger protein 265 isoform 1 PRPF4B 0.026 serine/threonine-protein kinase PRP4K CROP 0.026 cisplatin resistance-associated overexpressed protei... CROP 0.026 cisplatin resistance-associated overexpressed protei... SFRS11 0.026 splicing factor, arginine/serine-rich 11 LOC100133599 0.025 PREDICTED: hypothetical protein RSRC2 0.025 arginine/serine-rich coiled-coil 2 isoform a TCHH 0.024 trichohyalin NEFM 0.024 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.024 neurofilament, medium polypeptide 150kDa isoform 2 ... ZC3H13 0.024 zinc finger CCCH-type containing 13 THOC2 0.023 THO complex 2 LOC100133599 0.023 PREDICTED: hypothetical protein PPIG 0.023 peptidylprolyl isomerase G SFRS8 0.023 splicing factor, arginine/serine-rich 8 SFRS18 0.023 splicing factor, arginine/serine-rich 130 ZC3H18 0.023 zinc finger CCCH-type containing 18 SFRS18 0.023 splicing factor, arginine/serine-rich 130 LOC100131202 0.023 PREDICTED: hypothetical protein SRRM1 0.023 serine/arginine repetitive matrix 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.