Guide to the Human Genome
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Name: FBXO38 Sequence: fasta or formatted (1188aa) NCBI GI: 45545409
Description:

F-box protein 38 isoform b

Referenced in:

Cullins and SCF Complexes

Other entries for this name:
alt prot [1113aa] F-box protein 38 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         64           2
 C cysteine            2.8         33           3
 D aspartate           5.8         69           2
 E glutamate           7.9         94           2
 F phenylalanine       3.1         37           2
 G glycine             5.6         67           2
 H histidine           3.0         36           3
 I isoleucine          5.1         60           2
 K lysine              5.1         60           3
 L leucine             8.1         96           2
 M methionine          2.8         33           2
 N asparagine          4.9         58           3
 P proline             6.1         72           2
 Q glutamine           4.0         47           2
 R arginine            6.7         80           3
 S serine              8.2         98           3
 T threonine           4.6         55           2
 V valine              7.2         86           2
 W tryptophan          0.9         11           2
 Y tyrosine            2.7         32           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box protein 38 isoform b 
FBXO38                0.702   F-box protein 38 isoform a 
DSPP                  0.018   dentin sialophosphoprotein preproprotein 
RP1L1                 0.008   retinitis pigmentosa 1-like 1 
LOC729815             0.008   PREDICTED: hypothetical protein 
NOLC1                 0.007   nucleolar and coiled-body phosphoprotein 1 
NAP5                  0.007   Nck-associated protein 5 isoform 1 
ZRANB2                0.007   zinc finger protein 265 isoform 1 
SRRM2                 0.007   splicing coactivator subunit SRm300 
HRC                   0.007   histidine rich calcium binding protein precursor [Hom...
PPP4R2                0.006   protein phosphatase 4, regulatory subunit 2 
FLG                   0.006   filaggrin 
YTHDC1                0.006   splicing factor YT521-B isoform 1 
LOC100133915          0.006   PREDICTED: hypothetical protein 
ZRANB2                0.006   zinc finger protein 265 isoform 2 
DMP1                  0.006   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.006   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
TCOF1                 0.006   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.006   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.006   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.006   Treacher Collins-Franceschetti syndrome 1 isoform b ...
TCOF1                 0.006   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.006   Treacher Collins-Franceschetti syndrome 1 isoform c ...
MUPCDH                0.006   mucin and cadherin-like isoform 1 
AFF4                  0.005   ALL1 fused gene from 5q31 
PNN                   0.005   pinin, desmosome associated protein 
YTHDC1                0.005   splicing factor YT521-B isoform 2 
CCDC34                0.005   coiled-coil domain containing 34 isoform 1 
LOC100170229          0.005   hypothetical protein LOC100170229 
LOC729815             0.005   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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