Guide to the Human Genome
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Name: BCL2L13 Sequence: fasta or formatted (485aa) NCBI GI: 45243501
Description:

BCL2-like 13 (apoptosis facilitator)

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         37           3
 C cysteine            0.4          2           1
 D aspartate           2.9         14           1
 E glutamate          13.8         67           4
 F phenylalanine       1.9          9           1
 G glycine             4.9         24           2
 H histidine           1.9          9           1
 I isoleucine          3.7         18           2
 K lysine              4.7         23           2
 L leucine            12.4         60           2
 M methionine          1.6          8           1
 N asparagine          1.9          9           2
 P proline             7.4         36           2
 Q glutamine           4.5         22           2
 R arginine            2.1         10           2
 S serine             12.0         58           3
 T threonine           6.0         29           2
 V valine              7.4         36           2
 W tryptophan          1.0          5           1
 Y tyrosine            1.9          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2-like 13 (apoptosis facilitator) 
CMYA5                 0.025   cardiomyopathy associated 5 
NES                   0.022   nestin 
BCL2L14               0.019   BCL2-like 14 isoform 1 
BCL2L14               0.019   BCL2-like 14 isoform 1 
TTN                   0.018   titin isoform N2-A 
NEFH                  0.018   neurofilament, heavy polypeptide 200kDa 
TCOF1                 0.016   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.016   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.016   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.016   Treacher Collins-Franceschetti syndrome 1 isoform c ...
CAST                  0.015   calpastatin isoform l 
CAST                  0.015   calpastatin isoform k 
CAST                  0.015   calpastatin isoform j 
CAST                  0.015   calpastatin isoform i 
CAST                  0.015   calpastatin isoform h 
CAST                  0.015   calpastatin isoform g 
CAST                  0.015   calpastatin isoform f 
CAST                  0.015   calpastatin isoform e 
CAST                  0.015   calpastatin isoform c 
CAST                  0.015   calpastatin isoform b 
CAST                  0.015   calpastatin isoform a 
RP1L1                 0.015   retinitis pigmentosa 1-like 1 
MAP1S                 0.015   BPY2 interacting protein 1 
NFRKB                 0.014   nuclear factor related to kappaB binding protein is...
NFRKB                 0.014   nuclear factor related to kappaB binding protein iso...
PELP1                 0.013   proline, glutamic acid and leucine rich protein 1 [...
MUC16                 0.013   mucin 16 
DGKK                  0.013   diacylglycerol kinase kappa 
LIG1                  0.012   DNA ligase I 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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