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Search of human proteins with 4506857
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens]
(397 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens] 808 0.0
gi|41281612 zinc finger protein 828 [Homo sapiens] 55 8e-08
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens] 54 2e-07
gi|4506841 small inducible cytokine A2 precursor [Homo sapiens] 50 4e-06
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens] 50 5e-06
gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens] 49 1e-05
gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... 48 1e-05
gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... 48 1e-05
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens] 48 2e-05
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 47 2e-05
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 47 2e-05
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 47 2e-05
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 47 3e-05
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 47 3e-05
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 47 3e-05
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 47 4e-05
gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... 46 5e-05
gi|19913398 smoothelin isoform a [Homo sapiens] 46 7e-05
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 45 9e-05
gi|19913396 smoothelin isoform b [Homo sapiens] 45 9e-05
gi|19913394 smoothelin isoform c [Homo sapiens] 45 9e-05
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 45 1e-04
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 45 1e-04
gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens] 44 2e-04
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens] 44 2e-04
gi|166706868 synaptopodin 2-like isoform a [Homo sapiens] 44 2e-04
gi|50301232 synaptopodin 2-like isoform b [Homo sapiens] 44 2e-04
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens] 44 3e-04
gi|20143482 melanoma antigen family E, 1 [Homo sapiens] 44 3e-04
gi|7662162 ALEX2 protein [Homo sapiens] 44 3e-04
>gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens]
Length = 397
Score = 808 bits (2088), Expect = 0.0
Identities = 397/397 (100%), Positives = 397/397 (100%)
Query: 1 MAPISLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK 60
MAPISLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK
Sbjct: 1 MAPISLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK 60
Query: 61 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG 120
RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG
Sbjct: 61 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG 120
Query: 121 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP 180
MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP
Sbjct: 121 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP 180
Query: 181 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA 240
VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA
Sbjct: 181 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA 240
Query: 241 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE 300
PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE
Sbjct: 241 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE 300
Query: 301 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF 360
PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF
Sbjct: 301 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF 360
Query: 361 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV 397
TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV
Sbjct: 361 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV 397
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 55.5 bits (132), Expect = 8e-08
Identities = 52/203 (25%), Positives = 78/203 (38%), Gaps = 30/203 (14%)
Query: 127 LEPEATGESSSLE---PTPSSQEAQRALGTSPELPTGVTGSSGTRLPP--TPKAQDGGPV 181
LEP+ G S E P PS + ++ A +SPE P V +L P +P+ Q PV
Sbjct: 154 LEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPV 213
Query: 182 GTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKT----------SEAPSTQDPSTQASTA 231
E + + QS P GP + ++ +P+ S +++
Sbjct: 214 SPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSART 273
Query: 232 SSPAPEENAPSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPV 291
+SP P + +PSE W +P ++ E P PA + W PG P
Sbjct: 274 TSPEPRKPSPSESPEPW------KPFPAVSPEPRRPAPAVSPG--SWKPGP-------PG 318
Query: 292 SSEGTPSREPVASGSWTPKAEEP 314
S S +SG W P P
Sbjct: 319 SPRPWKSNPSASSGPWKPAKPAP 341
>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
Length = 99
Score = 53.9 bits (128), Expect = 2e-07
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 34 ITC--SKMTSKIPVALLIHYQQ-NQASCGKRAIILETRQHRLFCADPKEQWVKDAMQHLD 90
ITC + + KIP+ L Y + C K A+I +T++ + CADPKE+WV+D+M+HLD
Sbjct: 32 ITCCFNVINRKIPIQRLESYTRITNIQCPKEAVIFKTKRGKEVCADPKERWVRDSMKHLD 91
Query: 91 R 91
+
Sbjct: 92 Q 92
>gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
Length = 99
Score = 50.1 bits (118), Expect = 4e-06
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 36 CSKMTS-KIPVALLIHYQQNQAS-CGKRAIILETRQHRLFCADPKEQWVKDAMQHLDRQ 92
C T+ KI V L Y++ +S C K A+I +T + CADPK++WV+D+M HLD+Q
Sbjct: 35 CYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQ 93
>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
Length = 97
Score = 49.7 bits (117), Expect = 5e-06
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 5 SLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTS-KIPVALLIHYQQ-NQASCGKRA 62
+L WLL +A LAG T C C + + KIP+ L Y++ C ++A
Sbjct: 6 ALLWLLLIAA-AFSPQGLAGPASVPTTC---CFNLANRKIPLQRLESYRRITSGKCPQKA 61
Query: 63 IILETRQHRLFCADPKEQWVKDAMQHLDRQA 93
+I +T+ + CADPK++WV+D+M++LD+++
Sbjct: 62 VIFKTKLAKDICADPKKKWVQDSMKYLDQKS 92
>gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo
sapiens]
Length = 99
Score = 48.5 bits (114), Expect = 1e-05
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 28 GVTKCNITCSK-MTSKIPVALLIHYQQNQAS-CGKRAIILETRQHRLFCADPKEQWVKDA 85
G+ C + + KIP L Y++ +S C + A+I +T+ + CADP ++WV+D
Sbjct: 27 GINTSTTCCYRFINKKIPKQRLESYRRTTSSHCPREAVIFKTKLDKEICADPTQKWVQDF 86
Query: 86 MQHLDRQ 92
M+HLD++
Sbjct: 87 MKHLDKK 93
>gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Homo
sapiens]
Length = 92
Score = 48.1 bits (113), Expect = 1e-05
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 6 LSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTS-KIPVALLIHYQQNQASCGKRAII 64
LS L+ +A FC L + T C C T+ K+P ++ Y + + C + A++
Sbjct: 8 LSLLVLVAAFCSLALSAPMGSDPPTAC---CFSYTARKLPRNFVVDYYETSSLCSQPAVV 64
Query: 65 LETRQHRLFCADPKEQWVKDAMQHLD 90
+T++ + CADP E WV++ + L+
Sbjct: 65 FQTKRGKQVCADPSESWVQEYVYDLE 90
>gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Homo
sapiens]
Length = 92
Score = 48.1 bits (113), Expect = 1e-05
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 6 LSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTS-KIPVALLIHYQQNQASCGKRAII 64
LS L+ +A FC L + T C C T+ K+P ++ Y + + C + A++
Sbjct: 8 LSLLVLVAAFCSLALSAPMGSDPPTAC---CFSYTARKLPRNFVVDYYETSSLCSQPAVV 64
Query: 65 LETRQHRLFCADPKEQWVKDAMQHLD 90
+T++ + CADP E WV++ + L+
Sbjct: 65 FQTKRGKQVCADPSESWVQEYVYDLE 90
>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
Length = 98
Score = 47.8 bits (112), Expect = 2e-05
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 40 TSKIPVALLIHYQQNQASCGKRAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAAL 96
+ KI + L Y + C ++A+I T+ + CADPKE+WV++ M+HL R+A L
Sbjct: 40 SKKISLQRLKSYVITTSRCPQKAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTL 96
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 47.4 bits (111), Expect = 2e-05
Identities = 54/204 (26%), Positives = 78/204 (38%), Gaps = 17/204 (8%)
Query: 107 IGEVKPRTTPAAGGMDESVVLEPEATGESS-SLEPTPSSQEAQRALGTSPELPTGVTGSS 165
I + +P + P G + + EAT S+ S + SSQ Q SP P S
Sbjct: 612 IQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLS 671
Query: 166 GTRLPPTPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKT----SEAPST 221
P+P G PVG+ R P+S A+ S P QP P +E+ + S++P
Sbjct: 672 SIPGGPSPSPV-GSPVGSNQSRSGPISPASIPGSQMPPQP-PGSQSESSSHPALSQSPMP 729
Query: 222 QDPSTQASTASSPAPEENAPSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPG 281
Q+ A T +P + P + G SP P G + A +FQ
Sbjct: 730 QERGFMAGTQRNPQMAQYGPQQ----TGPSMSPHPSPG------GQMHAGISSFQQSNSS 779
Query: 282 SMAHVSVVPVSSEGTPSREPVASG 305
+ +G SR P SG
Sbjct: 780 GTYGPQMSQYGPQGNYSRPPAYSG 803
Score = 30.0 bits (66), Expect = 3.8
Identities = 32/148 (21%), Positives = 46/148 (31%), Gaps = 9/148 (6%)
Query: 171 PTPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQAST 230
P + + GP + +PP QSS+ P ++WA P T
Sbjct: 1368 PYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPT 1427
Query: 231 ASSPAPEENAPSE----GQRV-----WGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPG 281
+ P P N + QR+ W S R M P+ P
Sbjct: 1428 QAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPS 1487
Query: 282 SMAHVSVVPVSSEGTPSREPVASGSWTP 309
H+S P + S E S S +P
Sbjct: 1488 LPNHISRAPSPASFQRSLENRMSPSKSP 1515
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 47.4 bits (111), Expect = 2e-05
Identities = 54/204 (26%), Positives = 78/204 (38%), Gaps = 17/204 (8%)
Query: 107 IGEVKPRTTPAAGGMDESVVLEPEATGESS-SLEPTPSSQEAQRALGTSPELPTGVTGSS 165
I + +P + P G + + EAT S+ S + SSQ Q SP P S
Sbjct: 599 IQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLS 658
Query: 166 GTRLPPTPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKT----SEAPST 221
P+P G PVG+ R P+S A+ S P QP P +E+ + S++P
Sbjct: 659 SIPGGPSPSPV-GSPVGSNQSRSGPISPASIPGSQMPPQP-PGSQSESSSHPALSQSPMP 716
Query: 222 QDPSTQASTASSPAPEENAPSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPG 281
Q+ A T +P + P + G SP P G + A +FQ
Sbjct: 717 QERGFMAGTQRNPQMAQYGPQQ----TGPSMSPHPSPG------GQMHAGISSFQQSNSS 766
Query: 282 SMAHVSVVPVSSEGTPSREPVASG 305
+ +G SR P SG
Sbjct: 767 GTYGPQMSQYGPQGNYSRPPAYSG 790
Score = 30.0 bits (66), Expect = 3.8
Identities = 32/148 (21%), Positives = 46/148 (31%), Gaps = 9/148 (6%)
Query: 171 PTPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQAST 230
P + + GP + +PP QSS+ P ++WA P T
Sbjct: 1408 PYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPT 1467
Query: 231 ASSPAPEENAPSE----GQRV-----WGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPG 281
+ P P N + QR+ W S R M P+ P
Sbjct: 1468 QAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPS 1527
Query: 282 SMAHVSVVPVSSEGTPSREPVASGSWTP 309
H+S P + S E S S +P
Sbjct: 1528 LPNHISRAPSPASFQRSLENRMSPSKSP 1555
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 47.4 bits (111), Expect = 2e-05
Identities = 54/204 (26%), Positives = 78/204 (38%), Gaps = 17/204 (8%)
Query: 107 IGEVKPRTTPAAGGMDESVVLEPEATGESS-SLEPTPSSQEAQRALGTSPELPTGVTGSS 165
I + +P + P G + + EAT S+ S + SSQ Q SP P S
Sbjct: 599 IQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLS 658
Query: 166 GTRLPPTPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKT----SEAPST 221
P+P G PVG+ R P+S A+ S P QP P +E+ + S++P
Sbjct: 659 SIPGGPSPSPV-GSPVGSNQSRSGPISPASIPGSQMPPQP-PGSQSESSSHPALSQSPMP 716
Query: 222 QDPSTQASTASSPAPEENAPSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPG 281
Q+ A T +P + P + G SP P G + A +FQ
Sbjct: 717 QERGFMAGTQRNPQMAQYGPQQ----TGPSMSPHPSPG------GQMHAGISSFQQSNSS 766
Query: 282 SMAHVSVVPVSSEGTPSREPVASG 305
+ +G SR P SG
Sbjct: 767 GTYGPQMSQYGPQGNYSRPPAYSG 790
Score = 30.0 bits (66), Expect = 3.8
Identities = 32/148 (21%), Positives = 46/148 (31%), Gaps = 9/148 (6%)
Query: 171 PTPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQAST 230
P + + GP + +PP QSS+ P ++WA P T
Sbjct: 1355 PYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPT 1414
Query: 231 ASSPAPEENAPSE----GQRV-----WGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPG 281
+ P P N + QR+ W S R M P+ P
Sbjct: 1415 QAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPS 1474
Query: 282 SMAHVSVVPVSSEGTPSREPVASGSWTP 309
H+S P + S E S S +P
Sbjct: 1475 LPNHISRAPSPASFQRSLENRMSPSKSP 1502
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 47.0 bits (110), Expect = 3e-05
Identities = 59/195 (30%), Positives = 74/195 (37%), Gaps = 19/195 (9%)
Query: 127 LEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGPVGTELF 186
L AT SS SS A A SP P T + PPTP A P +
Sbjct: 132 LPQNATTISSRENVNTSSSVATLAPVNSPA-PQDTTAA-----PPTPSATTPAPPSSS-- 183
Query: 187 RVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENAPSEGQR 246
PP +TAA SA Q PS A +T+ AP T +T A +SS PE A
Sbjct: 184 -APPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTP- 241
Query: 247 VWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSREPVASGS 306
+P P +S E VP T + P S S P ++ P+ P A+
Sbjct: 242 ---SATTPAPLSSSAPPETTAVPP-TPSATTLDPSS---ASAPPETTAAPPT--PSATTP 292
Query: 307 WTPKAEEPIHATMDP 321
P + P T P
Sbjct: 293 APPSSPAPQETTAAP 307
Score = 40.8 bits (94), Expect = 0.002
Identities = 39/131 (29%), Positives = 51/131 (38%), Gaps = 15/131 (11%)
Query: 112 PRTTPAAGGMDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPP 171
P T PA S PE T + PTPS+ T+P + T +PP
Sbjct: 215 PPTPPATTPAPPSSSAPPETT----AAPPTPSA--------TTPAPLSSSAPPETTAVPP 262
Query: 172 TPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTA 231
TP A P PP +TAA SA PS A +T+ AP T S+ + A
Sbjct: 263 TPSATTLDPSSAS---APPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLA 319
Query: 232 SSPAPEENAPS 242
+ AP+
Sbjct: 320 PDTSETSAAPT 330
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 47.0 bits (110), Expect = 3e-05
Identities = 59/195 (30%), Positives = 74/195 (37%), Gaps = 19/195 (9%)
Query: 127 LEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGPVGTELF 186
L AT SS SS A A SP P T + PPTP A P +
Sbjct: 132 LPQNATTISSRENVNTSSSVATLAPVNSPA-PQDTTAA-----PPTPSATTPAPPSSS-- 183
Query: 187 RVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENAPSEGQR 246
PP +TAA SA Q PS A +T+ AP T +T A +SS PE A
Sbjct: 184 -APPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTP- 241
Query: 247 VWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSREPVASGS 306
+P P +S E VP T + P S S P ++ P+ P A+
Sbjct: 242 ---SATTPAPLSSSAPPETTAVPP-TPSATTLDPSS---ASAPPETTAAPPT--PSATTP 292
Query: 307 WTPKAEEPIHATMDP 321
P + P T P
Sbjct: 293 APPSSPAPQETTAAP 307
Score = 40.8 bits (94), Expect = 0.002
Identities = 39/131 (29%), Positives = 51/131 (38%), Gaps = 15/131 (11%)
Query: 112 PRTTPAAGGMDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPP 171
P T PA S PE T + PTPS+ T+P + T +PP
Sbjct: 215 PPTPPATTPAPPSSSAPPETT----AAPPTPSA--------TTPAPLSSSAPPETTAVPP 262
Query: 172 TPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTA 231
TP A P PP +TAA SA PS A +T+ AP T S+ + A
Sbjct: 263 TPSATTLDPSSAS---APPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLA 319
Query: 232 SSPAPEENAPS 242
+ AP+
Sbjct: 320 PDTSETSAAPT 330
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 47.0 bits (110), Expect = 3e-05
Identities = 59/195 (30%), Positives = 74/195 (37%), Gaps = 19/195 (9%)
Query: 127 LEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGPVGTELF 186
L AT SS SS A A SP P T + PPTP A P +
Sbjct: 132 LPQNATTISSRENVNTSSSVATLAPVNSPA-PQDTTAA-----PPTPSATTPAPPSSS-- 183
Query: 187 RVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENAPSEGQR 246
PP +TAA SA Q PS A +T+ AP T +T A +SS PE A
Sbjct: 184 -APPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTP- 241
Query: 247 VWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSREPVASGS 306
+P P +S E VP T + P S S P ++ P+ P A+
Sbjct: 242 ---SATTPAPLSSSAPPETTAVPP-TPSATTLDPSS---ASAPPETTAAPPT--PSATTP 292
Query: 307 WTPKAEEPIHATMDP 321
P + P T P
Sbjct: 293 APPSSPAPQETTAAP 307
Score = 40.8 bits (94), Expect = 0.002
Identities = 39/131 (29%), Positives = 51/131 (38%), Gaps = 15/131 (11%)
Query: 112 PRTTPAAGGMDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPP 171
P T PA S PE T + PTPS+ T+P + T +PP
Sbjct: 215 PPTPPATTPAPPSSSAPPETT----AAPPTPSA--------TTPAPLSSSAPPETTAVPP 262
Query: 172 TPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTA 231
TP A P PP +TAA SA PS A +T+ AP T S+ + A
Sbjct: 263 TPSATTLDPSSAS---APPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLA 319
Query: 232 SSPAPEENAPS 242
+ AP+
Sbjct: 320 PDTSETSAAPT 330
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 46.6 bits (109), Expect = 4e-05
Identities = 71/278 (25%), Positives = 98/278 (35%), Gaps = 51/278 (18%)
Query: 104 EKQIGEVKPRTTPAAGGMDESVVLEPEATGESSSLEPTPSS-----QEAQRALGTSPELP 158
E Q+ E +P +T V PEA G + T S + +Q TS
Sbjct: 448 EIQVSEQEPPST--------DVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGG 499
Query: 159 TGVTGSSGTRLPPTPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEA 218
TG SGT L P + GGP G E +S HQP A+T +
Sbjct: 500 TGPHPPSGTTLRPPTSSTPGGPPGAE--------------NSTSHQPATPGGDTAQTPKP 545
Query: 219 PSTQ--DPSTQASTASSPAPEENAPSEGQRVWGQGQSPRPENSLER-EEMGPVPAHTDAF 275
++Q P ST+ PA PS G Q+P P S MG +H A
Sbjct: 546 GTSQPMPPGVGTSTSHQPA----TPS-----GGTAQTPEPGTSQPMPPSMGTSTSHQPAT 596
Query: 276 QDWGPGSMAHVSV---VPVSSEGTPSREPVASGSWTPKAEEPIHATMDPQRLGVLITPVP 332
G +P + S +P G T + EP T P L
Sbjct: 597 PGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEP--GTSQPMPLSKSTPSSG 654
Query: 333 DAQAATRRQAV-------GLLAFLGLLFCLGVAMFTYQ 363
+ +R +V G+L L LL LG+A+ ++
Sbjct: 655 GGPSEDKRFSVVDMAALGGVLGALLLLALLGLAVLVHK 692
>gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Homo
sapiens]
Length = 92
Score = 46.2 bits (108), Expect = 5e-05
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 6 LSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTS-KIPVALLIHYQQNQASCGKRAII 64
LS L+ +A FC + T C C T+ K+P ++ Y + + C + A++
Sbjct: 8 LSLLMLVAAFCSPALSAPMGSDPPTAC---CFSYTARKLPRNFVVDYYETSSLCSQPAVV 64
Query: 65 LETRQHRLFCADPKEQWVKDAMQHLD 90
+T++ + CADP E WV++ + L+
Sbjct: 65 FQTKRSKQVCADPSESWVQEYVYDLE 90
>gi|19913398 smoothelin isoform a [Homo sapiens]
Length = 940
Score = 45.8 bits (107), Expect = 7e-05
Identities = 64/237 (27%), Positives = 96/237 (40%), Gaps = 37/237 (15%)
Query: 65 LETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTT--PAAGGMD 122
L +++ R D KE W+ + + Q AAL R G E + +V+ T +AG +
Sbjct: 49 LASKRFRAERQDNKENWLHSQQREAE-QRAALARLAGQLES-MNDVEELTALLRSAGEYE 106
Query: 123 ESVVL----------EPEAT---GESSSLEPTPSSQEAQRALGTS-------PELPTGVT 162
E ++ E EA G S P S+E + L PE
Sbjct: 107 ERKLIRAAIRRVRAQEIEAATLAGRLYSGRPNSGSREDSKGLAAHRLEQCEVPEREEQEQ 166
Query: 163 GSSGTRLPPTPK--AQDGGPVGTELFRVPPVST----AATWQSSAPHQPGPSLW---AEA 213
+ ++ PTP+ +QD V T L R PP ST A+ S P P P L A+
Sbjct: 167 QAEVSKPTPTPEGTSQDVTTV-TLLLRAPPGSTSSSPASPSSSPTPASPEPPLEPAEAQC 225
Query: 214 KTSEAPSTQDPSTQASTASSPAPEEN---APSEGQRVWGQGQSPRPENSLEREEMGP 267
T+E P + +P +SP P+E+ +EGQ V P+ + + GP
Sbjct: 226 LTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSGPKETPAAQSPHRGP 282
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 45.4 bits (106), Expect = 9e-05
Identities = 59/225 (26%), Positives = 84/225 (37%), Gaps = 40/225 (17%)
Query: 115 TPAAGGMDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPK 174
TP V PE + ++ PTP+ + A+ + E PT S PTP
Sbjct: 1152 TPEESASAAVAVPTPEESASPAAAVPTPAESASFAAVVATLEEPTSPAASV-----PTPA 1206
Query: 175 AQDG------GPVGTELFRVPPVSTAATWQS----SAPHQPGPSLWAEAKTSEAPSTQDP 224
A P + P S AA + ++P P+L E TS A + P
Sbjct: 1207 AMVATLEEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTL--EEPTSSAAAVLTP 1264
Query: 225 STQASTASS-PAPEENAPSEGQRVWGQGQSPRPENSLEREEMGPVPAHT----------- 272
+S A+S P PEE A S V + P ++ E+ +PA +
Sbjct: 1265 EELSSPAASVPTPEEPA-SPAAAVSNLEEPASPAAAVPTPEVAAIPAASVPTPEVPAIPA 1323
Query: 273 ---DAFQDWGP------GSMAHVSVVPVSSEGTPSREPVAS-GSW 307
++ P G AH VP+S EGTP E +S G W
Sbjct: 1324 AAVPPMEEVSPIGVPFLGVSAHTDSVPISEEGTPVLEEASSTGMW 1368
Score = 39.7 bits (91), Expect = 0.005
Identities = 60/264 (22%), Positives = 86/264 (32%), Gaps = 37/264 (14%)
Query: 96 LTRNGGTFEKQIGEVKPRTTPAAGGMDESVVLE---PEATGESSSLEPTPSSQEAQRALG 152
+T GT E G V P TT A ++ + PE ++ PTP + A
Sbjct: 964 ITEEDGTPE---GPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAV 1020
Query: 153 TSPELPTGVTGSSGTRLPPTPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSL-WA 211
+PE PT S +PP P+ P AA P P ++
Sbjct: 1021 PTPEEPT----SPAAAVPP-PEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTP 1075
Query: 212 EAKTSEA---PSTQDPSTQASTASSP----APEENAPSEGQRVWGQGQSPRPENSLEREE 264
E TS A P+ ++P++ A+ +P +P P+ + P PE
Sbjct: 1076 EEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAA 1135
Query: 265 MGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSREPVASGSWTPKAEEP---------- 314
P P P A P S P S +P A P
Sbjct: 1136 AVPTPEE--------PAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPTPAESASFAA 1187
Query: 315 IHATMDPQRLGVLITPVPDAQAAT 338
+ AT++ P P A AT
Sbjct: 1188 VVATLEEPTSPAASVPTPAAMVAT 1211
>gi|19913396 smoothelin isoform b [Homo sapiens]
Length = 915
Score = 45.4 bits (106), Expect = 9e-05
Identities = 64/237 (27%), Positives = 96/237 (40%), Gaps = 37/237 (15%)
Query: 65 LETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTT--PAAGGMD 122
L +++ R D KE W+ + + Q AAL R G E + +V+ T +AG +
Sbjct: 49 LASKRFRAERQDNKENWLHSQQREAE-QRAALARLAGQLES-MNDVEELTALLRSAGEYE 106
Query: 123 ESVVL----------EPEAT---GESSSLEPTPSSQEAQRALGTS-------PELPTGVT 162
E ++ E EA G S P S+E + L PE
Sbjct: 107 ERKLIRAAIRRVRAQEIEAATLAGRLYSGRPNSGSREDSKGLAAHRLEQCEVPEREEQEQ 166
Query: 163 GSSGTRLPPTPK--AQDGGPVGTELFRVPPVST----AATWQSSAPHQPGPSLW---AEA 213
+ ++ PTP+ +QD V T L R PP ST A+ S P P P L A+
Sbjct: 167 QAEVSKPTPTPEGTSQDVTTV-TLLLRAPPGSTSSSPASPSSSPTPASPEPPLEPAEAQC 225
Query: 214 KTSEAPSTQDPSTQASTASSPAPEEN---APSEGQRVWGQGQSPRPENSLEREEMGP 267
T+E P + +P +SP P+E+ +EGQ V P+ + + GP
Sbjct: 226 LTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSGPKETPAAQSPTRGP 282
>gi|19913394 smoothelin isoform c [Homo sapiens]
Length = 917
Score = 45.4 bits (106), Expect = 9e-05
Identities = 64/237 (27%), Positives = 96/237 (40%), Gaps = 37/237 (15%)
Query: 65 LETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTT--PAAGGMD 122
L +++ R D KE W+ + + Q AAL R G E + +V+ T +AG +
Sbjct: 49 LASKRFRAERQDNKENWLHSQQREAE-QRAALARLAGQLES-MNDVEELTALLRSAGEYE 106
Query: 123 ESVVL----------EPEAT---GESSSLEPTPSSQEAQRALGTS-------PELPTGVT 162
E ++ E EA G S P S+E + L PE
Sbjct: 107 ERKLIRAAIRRVRAQEIEAATLAGRLYSGRPNSGSREDSKGLAAHRLEQCEVPEREEQEQ 166
Query: 163 GSSGTRLPPTPK--AQDGGPVGTELFRVPPVST----AATWQSSAPHQPGPSLW---AEA 213
+ ++ PTP+ +QD V T L R PP ST A+ S P P P L A+
Sbjct: 167 QAEVSKPTPTPEGTSQDVTTV-TLLLRAPPGSTSSSPASPSSSPTPASPEPPLEPAEAQC 225
Query: 214 KTSEAPSTQDPSTQASTASSPAPEEN---APSEGQRVWGQGQSPRPENSLEREEMGP 267
T+E P + +P +SP P+E+ +EGQ V P+ + + GP
Sbjct: 226 LTAEVPGSPEPPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSGPKETPAAQSPTRGP 282
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 44.7 bits (104), Expect = 1e-04
Identities = 54/225 (24%), Positives = 82/225 (36%), Gaps = 13/225 (5%)
Query: 129 PEATGESSSLEP----TPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGPVGTE 184
P+ + S+ P TP ++ SP +P G S PP G +G
Sbjct: 174 PDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGG 233
Query: 185 LFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPST--QDPSTQASTASSPAPEENAP- 241
R P+S+++ + + P P PS + K P PS P P+ N P
Sbjct: 234 SIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPP 293
Query: 242 -SEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE 300
R Q+P P R P+P + + ++S +SS P
Sbjct: 294 VPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLS---LSSSTPPLPS 350
Query: 301 PVASGSW-TPKAEEPIHATMDPQ-RLGVLITPVPDAQAATRRQAV 343
P SG P +E P DP R G L P P ++ + +A+
Sbjct: 351 PGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRAL 395
Score = 33.5 bits (75), Expect = 0.35
Identities = 33/132 (25%), Positives = 48/132 (36%), Gaps = 6/132 (4%)
Query: 112 PRTTPAAGGMDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELP----TGVTGSSGT 167
P P++ G DE+ L SSS P PS + E P G SG
Sbjct: 319 PPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGP 378
Query: 168 RLPPTPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQ 227
PP P +++G + P + + S P P L + ++ AP PST
Sbjct: 379 LPPPPPVSRNGST--SRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTS 436
Query: 228 ASTASSPAPEEN 239
+P E+
Sbjct: 437 IRNGFQDSPCED 448
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 44.7 bits (104), Expect = 1e-04
Identities = 54/225 (24%), Positives = 82/225 (36%), Gaps = 13/225 (5%)
Query: 129 PEATGESSSLEP----TPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGPVGTE 184
P+ + S+ P TP ++ SP +P G S PP G +G
Sbjct: 174 PDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGG 233
Query: 185 LFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPST--QDPSTQASTASSPAPEENAP- 241
R P+S+++ + + P P PS + K P PS P P+ N P
Sbjct: 234 SIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPP 293
Query: 242 -SEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE 300
R Q+P P R P+P + + ++S +SS P
Sbjct: 294 VPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLS---LSSSTPPLPS 350
Query: 301 PVASGSW-TPKAEEPIHATMDPQ-RLGVLITPVPDAQAATRRQAV 343
P SG P +E P DP R G L P P ++ + +A+
Sbjct: 351 PGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRAL 395
Score = 33.5 bits (75), Expect = 0.35
Identities = 33/132 (25%), Positives = 48/132 (36%), Gaps = 6/132 (4%)
Query: 112 PRTTPAAGGMDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELP----TGVTGSSGT 167
P P++ G DE+ L SSS P PS + E P G SG
Sbjct: 319 PPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGP 378
Query: 168 RLPPTPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQ 227
PP P +++G + P + + S P P L + ++ AP PST
Sbjct: 379 LPPPPPVSRNGST--SRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTS 436
Query: 228 ASTASSPAPEEN 239
+P E+
Sbjct: 437 IRNGFQDSPCED 448
>gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]
Length = 114
Score = 44.3 bits (103), Expect = 2e-04
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 9 LLRLATFCHLTV-LLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGKRAIILET 67
+L L C LT ++ G V+ S T ++PV+ + Y + S RA+I T
Sbjct: 5 ILALLGICSLTAYIVEGVGSEVSDKRTCVSLTTQRLPVSRIKTYTITEGSL--RAVIFIT 62
Query: 68 RQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTT 115
++ CADP+ WV+D ++ +DR++ TRN K G + T
Sbjct: 63 KRGLKVCADPQATWVRDVVRSMDRKSN--TRNNMIQTKPTGTQQSTNT 108
>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
Length = 114
Score = 44.3 bits (103), Expect = 2e-04
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 9 LLRLATFCHLTV-LLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGKRAIILET 67
+L L C LT ++ G V+ S T ++PV+ + Y + S RA+I T
Sbjct: 5 ILALLGICSLTAYIVEGVGSEVSHRRTCVSLTTQRLPVSRIKTYTITEGSL--RAVIFIT 62
Query: 68 RQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTT 115
++ CADP+ WV+D ++ +DR++ TRN K G + T
Sbjct: 63 KRGLKVCADPQATWVRDVVRSMDRKSN--TRNNMIQTKPTGTQQSTNT 108
>gi|166706868 synaptopodin 2-like isoform a [Homo sapiens]
Length = 977
Score = 44.3 bits (103), Expect = 2e-04
Identities = 50/182 (27%), Positives = 65/182 (35%), Gaps = 35/182 (19%)
Query: 145 QEAQRALGTSPEL----PTGVTGSSGTRLPPTPKAQDGGPVGTELFRVPPVSTAATWQSS 200
Q+ QRA ++ EL P + G + PP +AQ P L PP A S
Sbjct: 393 QQRQRADSSTQELARVEPAAMLNGEGLQSPP--RAQSAPPEAAVL---PPSPLPAPVASP 447
Query: 201 APHQPGPSLWAEAKT----SEAPSTQDPSTQASTASSPAPEENAPSEGQRVWGQGQSPRP 256
P QPG A + S P T Q T +S AP G G SP P
Sbjct: 448 RPFQPGGGAPTPAPSIFNRSARPFTPGLQGQRPTTTSVIFRPLAPKRANDSLG-GLSPAP 506
Query: 257 ENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSREPVASGSWTPKAEEPIH 316
L + P+P+ T G PS PV+ TP++ P+
Sbjct: 507 PPFLSSQGPTPLPSFTS---------------------GVPSHAPVSGSPSTPRSSGPVT 545
Query: 317 AT 318
AT
Sbjct: 546 AT 547
Score = 30.8 bits (68), Expect = 2.2
Identities = 26/116 (22%), Positives = 40/116 (34%), Gaps = 2/116 (1%)
Query: 127 LEPEATGES-SSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGPVGTEL 185
L P+ +S L P P + + P +GV + P+ G T
Sbjct: 490 LAPKRANDSLGGLSPAPPPFLSSQGPTPLPSFTSGVPSHAPVSGSPSTPRSSGPVTATSS 549
Query: 186 FRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENAP 241
+P S T AP P P A ++ + P ++ +PAP AP
Sbjct: 550 LYIPAPSRPVT-PGGAPEPPAPPSAAAMTSTASIFLSAPLRPSARPEAPAPGPGAP 604
Score = 30.8 bits (68), Expect = 2.2
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Query: 169 LPPTPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQD-PSTQ 227
+PPTP GP+ + + V + + AP L A +T D P +
Sbjct: 867 VPPTP-----GPIASGSPKTARVQEIRRFSTPAPQPTAEPLAPTVLAPRAATTLDEPIWR 921
Query: 228 ASTASSPAPEENAPSEGQRVWGQGQSP 254
AS+P P P E R G G SP
Sbjct: 922 TELASAPVPSPAPPPEAPR--GLGASP 946
>gi|50301232 synaptopodin 2-like isoform b [Homo sapiens]
Length = 753
Score = 44.3 bits (103), Expect = 2e-04
Identities = 50/182 (27%), Positives = 65/182 (35%), Gaps = 35/182 (19%)
Query: 145 QEAQRALGTSPEL----PTGVTGSSGTRLPPTPKAQDGGPVGTELFRVPPVSTAATWQSS 200
Q+ QRA ++ EL P + G + PP +AQ P L PP A S
Sbjct: 169 QQRQRADSSTQELARVEPAAMLNGEGLQSPP--RAQSAPPEAAVL---PPSPLPAPVASP 223
Query: 201 APHQPGPSLWAEAKT----SEAPSTQDPSTQASTASSPAPEENAPSEGQRVWGQGQSPRP 256
P QPG A + S P T Q T +S AP G G SP P
Sbjct: 224 RPFQPGGGAPTPAPSIFNRSARPFTPGLQGQRPTTTSVIFRPLAPKRANDSLG-GLSPAP 282
Query: 257 ENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSREPVASGSWTPKAEEPIH 316
L + P+P+ T G PS PV+ TP++ P+
Sbjct: 283 PPFLSSQGPTPLPSFTS---------------------GVPSHAPVSGSPSTPRSSGPVT 321
Query: 317 AT 318
AT
Sbjct: 322 AT 323
Score = 30.8 bits (68), Expect = 2.2
Identities = 26/116 (22%), Positives = 40/116 (34%), Gaps = 2/116 (1%)
Query: 127 LEPEATGES-SSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGPVGTEL 185
L P+ +S L P P + + P +GV + P+ G T
Sbjct: 266 LAPKRANDSLGGLSPAPPPFLSSQGPTPLPSFTSGVPSHAPVSGSPSTPRSSGPVTATSS 325
Query: 186 FRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENAP 241
+P S T AP P P A ++ + P ++ +PAP AP
Sbjct: 326 LYIPAPSRPVT-PGGAPEPPAPPSAAAMTSTASIFLSAPLRPSARPEAPAPGPGAP 380
Score = 30.8 bits (68), Expect = 2.2
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Query: 169 LPPTPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQD-PSTQ 227
+PPTP GP+ + + V + + AP L A +T D P +
Sbjct: 643 VPPTP-----GPIASGSPKTARVQEIRRFSTPAPQPTAEPLAPTVLAPRAATTLDEPIWR 697
Query: 228 ASTASSPAPEENAPSEGQRVWGQGQSP 254
AS+P P P E R G G SP
Sbjct: 698 TELASAPVPSPAPPPEAPR--GLGASP 722
>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
Length = 119
Score = 43.9 bits (102), Expect = 3e-04
Identities = 18/53 (33%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 39 MTSKIPVALLIHYQ-QNQASCGKRAIILETRQHRLFCADPKEQWVKDAMQHLD 90
++ +IP ++ YQ ++++C K +I T++ + FC DPK++WV+ M++LD
Sbjct: 38 VSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNLD 90
>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
Length = 957
Score = 43.9 bits (102), Expect = 3e-04
Identities = 59/230 (25%), Positives = 81/230 (35%), Gaps = 36/230 (15%)
Query: 109 EVKPRTTPAAGGMDESVVLEPEATG-ESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGT 167
E + + P + S + P A+ S+SL PTP GTS +P T
Sbjct: 134 EGRNTSRPPTSSEEPSTSVPPTASEVPSTSLPPTPGE-------GTSTSVPPTAYEGPST 186
Query: 168 RLPPTPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQ 227
+ PTP D GP T + P + +A G S +A E PST P T
Sbjct: 187 SVVPTP---DEGP-STSVLPTPGEGPGTSVPLAATE--GLSTSVQATPDEGPSTSVPPTA 240
Query: 228 ASTASSPAPEENAPSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVS 287
S+P P V P E +PA +D +S
Sbjct: 241 TEGLSTPVPPTRDEGPSTSV--------PATPGEGPSTSVLPAASDG---------QSIS 283
Query: 288 VVPVSSEGTPSREPVA-----SGSWTPKAEEPIHATMDPQRLGVLITPVP 332
+VP +G+ + P S S P A E ++ P G L T VP
Sbjct: 284 LVPTRGKGSSTSVPPTATEGLSTSVQPTAGEGSSTSVPPTPGGGLSTSVP 333
Score = 41.6 bits (96), Expect = 0.001
Identities = 63/244 (25%), Positives = 84/244 (34%), Gaps = 45/244 (18%)
Query: 109 EVKPRTTPAAGGMDESVVLEPEA-TGESSSLEPTPSSQEAQRALGTSPE-----LPTGVT 162
EV + P G S + P A G S+S+ PTP + L T E +P T
Sbjct: 158 EVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPTPDEGPSTSVLPTPGEGPGTSVPLAAT 217
Query: 163 GSSGTRLPPTPKAQDGGPVGTELFRVPPVSTAATWQSSAP-HQPGPSLWAEAKTSEAPST 221
T + TP D GP + VPP +T P GPS A E PST
Sbjct: 218 EGLSTSVQATP---DEGPSTS----VPPTATEGLSTPVPPTRDEGPSTSVPATPGEGPST 270
Query: 222 QD-PSTQ--------------ASTASSPAPEENAPSEGQRVWGQGQS----PRPENSLER 262
P+ +ST+ P E + Q G+G S P P L
Sbjct: 271 SVLPAASDGQSISLVPTRGKGSSTSVPPTATEGLSTSVQPTAGEGSSTSVPPTPGGGLST 330
Query: 263 -------EEMG----PVPAHTDAFQDWG-PGSMAHVSVVPVSSEGTPSREPVASGSWTPK 310
EE+ P P + PG SV P +S+G+ + P G
Sbjct: 331 SVPPTATEELSTSVPPTPGEGPSTSVLPIPGEGLSTSVPPTASDGSDTSVPPTPGEGAST 390
Query: 311 AEEP 314
+P
Sbjct: 391 LVQP 394
>gi|7662162 ALEX2 protein [Homo sapiens]
Length = 632
Score = 43.9 bits (102), Expect = 3e-04
Identities = 68/269 (25%), Positives = 103/269 (38%), Gaps = 42/269 (15%)
Query: 109 EVKPRTTPAAGGMDESVVLEPEATGESSSLEPTPSSQEAQRA--LGTSPELPTGVTGSSG 166
E + R A +D +V E A SS+ + + +AQ A G P+ + V +
Sbjct: 78 EAEDRAQDEASALD-TVGAEAVAPAASSAEAQSGAGSQAQEADGAGVGPKAESVVGAAMA 136
Query: 167 TRLPPTP-----------KAQDGGPVGTELFR--------VPPVSTAATWQSSAPHQ--P 205
+ + P P A G P E R VPP + T +++AP +
Sbjct: 137 SAIAPPPGVTEALGAAEAPAMAGAPKVAEAPREAETSRAAVPPGTVVPT-EAAAPTEVTE 195
Query: 206 GPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENAPSEGQRVWGQGQSPRPENSLEREEM 265
GP + A K +EAP P T+A+ A PA A + G S P ++
Sbjct: 196 GPGVAAPTKVAEAPGVASP-TEAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAV----- 249
Query: 266 GPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSREPVASGSWTPKAE-----EPIHATMD 320
VP T A + PG AH +P ++ T P G ++ + + ++
Sbjct: 250 --VPG-TSAAKKATPG--AHTGAIPKATSAT-GAVPKGGGKGVTRSRNGGKGKGKKSKVE 303
Query: 321 PQRLGVLITPVPDAQAATRRQAVGLLAFL 349
LG+ P A AA A G AFL
Sbjct: 304 VDELGMGFRPGDGAAAAAAASANGGQAFL 332
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,680,573
Number of Sequences: 37866
Number of extensions: 1095091
Number of successful extensions: 6912
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 735
Number of HSP's that attempted gapping in prelim test: 5413
Number of HSP's gapped (non-prelim): 1915
length of query: 397
length of database: 18,247,518
effective HSP length: 104
effective length of query: 293
effective length of database: 14,309,454
effective search space: 4192670022
effective search space used: 4192670022
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.