Search of human proteins with 4506849

Search of human proteins with 4506849

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4506849 chemokine (C-X-C motif) ligand 5 precursor [Homo
sapiens]
         (114 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4506849 chemokine (C-X-C motif) ligand 5 precursor [Homo sapi...   224   9e-60
gi|4506851 chemokine (C-X-C motif) ligand 6 (granulocyte chemota...   182   6e-47
gi|4504153 chemokine (C-X-C motif) ligand 1 [Homo sapiens]             94   2e-20
gi|54144650 chemokine (C-X-C motif) ligand 3 [Homo sapiens]            91   2e-19
gi|4504155 chemokine (C-X-C motif) ligand 2 [Homo sapiens]             89   7e-19
gi|4505981 pro-platelet basic protein precursor [Homo sapiens]         87   3e-18
gi|4505733 platelet factor 4 (chemokine (C-X-C motif) ligand 4) ...    79   1e-15
gi|221219042 pro-platelet basic protein-like 1 [Homo sapiens]          74   3e-14
gi|4505735 platelet factor 4 variant 1 [Homo sapiens]                  71   2e-13
gi|10834978 interleukin 8 precursor [Homo sapiens]                     66   7e-12
gi|4505187 small inducible cytokine B9 precursor [Homo sapiens]        65   2e-11
gi|149999382 small inducible cytokine B10 precursor [Homo sapiens]     48   1e-06
gi|5453577 chemokine (C-X-C motif) ligand 13 (B-cell chemoattrac...    45   9e-06
gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]       40   4e-04
gi|76563933 chemokine (C-X-C motif) ligand 12 (stromal cell-deri...    39   0.001
gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]      38   0.002
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom...    37   0.003
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom...    37   0.003
gi|10834988 chemokine (C-X-C motif) ligand 12 (stromal cell-deri...    34   0.022
gi|40316924 chemokine (C-X-C motif) ligand 12 (stromal cell-deri...    34   0.022
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]       33   0.037
gi|4885589 small inducible cytokine B11 precursor [Homo sapiens]       33   0.064
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]       32   0.083
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]               32   0.14 
gi|117676403 HIV-1 rev binding protein 2 [Homo sapiens]                32   0.14 
gi|38016937 lemur tyrosine kinase 2 [Homo sapiens]                     31   0.18 
gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo sapi...    30   0.41 
gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Hom...    30   0.41 
gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Hom...    30   0.41 
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]       28   1.2  

>gi|4506849 chemokine (C-X-C motif) ligand 5 precursor [Homo
           sapiens]
          Length = 114

 Score =  224 bits (572), Expect = 9e-60
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MSLLSSRAARVPGPSSSLCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHP 60
           MSLLSSRAARVPGPSSSLCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHP
Sbjct: 1   MSLLSSRAARVPGPSSSLCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHP 60

Query: 61  KMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDGGNKEN 114
           KMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDGGNKEN
Sbjct: 61  KMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDGGNKEN 114


>gi|4506851 chemokine (C-X-C motif) ligand 6 (granulocyte
           chemotactic protein 2) [Homo sapiens]
          Length = 114

 Score =  182 bits (461), Expect = 6e-47
 Identities = 91/114 (79%), Positives = 98/114 (85%)

Query: 1   MSLLSSRAARVPGPSSSLCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHP 60
           MSL SSRAARVPGPS SLCALL LLLLLT PGP+ASAGP +AVL ELRC CL+ T  V+P
Sbjct: 1   MSLPSSRAARVPGPSGSLCALLALLLLLTPPGPLASAGPVSAVLTELRCTCLRVTLRVNP 60

Query: 61  KMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDGGNKEN 114
           K I  LQVF  GPQCSKVEVVASLKNGK++CLDPEAPFLKKVIQKILD GNK+N
Sbjct: 61  KTIGKLQVFPAGPQCSKVEVVASLKNGKQVCLDPEAPFLKKVIQKILDSGNKKN 114


>gi|4504153 chemokine (C-X-C motif) ligand 1 [Homo sapiens]
          Length = 107

 Score = 94.4 bits (233), Expect = 2e-20
 Identities = 48/103 (46%), Positives = 70/103 (67%), Gaps = 2/103 (1%)

Query: 6   SRAARVPGPSSSLCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISN 65
           +RAA    PS+     + LLLLL       +AG  A+V  ELRC CLQT QG+HPK I +
Sbjct: 2   ARAALSAAPSNPRLLRVALLLLLLVAAGRRAAG--ASVATELRCQCLQTLQGIHPKNIQS 59

Query: 66  LQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILD 108
           + V + GP C++ EV+A+LKNG++ CL+P +P +KK+I+K+L+
Sbjct: 60  VNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLN 102


>gi|54144650 chemokine (C-X-C motif) ligand 3 [Homo sapiens]
          Length = 107

 Score = 90.9 bits (224), Expect = 2e-19
 Identities = 46/98 (46%), Positives = 68/98 (69%), Gaps = 2/98 (2%)

Query: 14  PSSSLCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGP 73
           PS+     + LLLLL       +AG  A+V+ ELRC CLQT QG+H K I ++ V + GP
Sbjct: 10  PSNPRLLRVALLLLLLVAASRRAAG--ASVVTELRCQCLQTLQGIHLKNIQSVNVRSPGP 67

Query: 74  QCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDGGN 111
            C++ EV+A+LKNGK+ CL+P +P ++K+I+KIL+ G+
Sbjct: 68  HCAQTEVIATLKNGKKACLNPASPMVQKIIEKILNKGS 105


>gi|4504155 chemokine (C-X-C motif) ligand 2 [Homo sapiens]
          Length = 107

 Score = 89.0 bits (219), Expect = 7e-19
 Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 2/105 (1%)

Query: 6   SRAARVPGPSSSLCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISN 65
           +RA     PS+     + LLLLL       +AG  A +  ELRC CLQT QG+H K I +
Sbjct: 2   ARATLSAAPSNPRLLRVALLLLLLVAASRRAAG--APLATELRCQCLQTLQGIHLKNIQS 59

Query: 66  LQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDGG 110
           ++V + GP C++ EV+A+LKNG++ CL+P +P +KK+I+K+L  G
Sbjct: 60  VKVKSPGPHCAQTEVIATLKNGQKACLNPASPMVKKIIEKMLKNG 104


>gi|4505981 pro-platelet basic protein precursor [Homo sapiens]
          Length = 128

 Score = 87.0 bits (214), Expect = 3e-18
 Identities = 36/64 (56%), Positives = 53/64 (82%)

Query: 46  ELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQK 105
           ELRC+C++TT G+HPK I +L+V   G  C++VEV+A+LK+G++ICLDP+AP +KK++QK
Sbjct: 60  ELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQK 119

Query: 106 ILDG 109
            L G
Sbjct: 120 KLAG 123


>gi|4505733 platelet factor 4 (chemokine (C-X-C motif) ligand 4)
           [Homo sapiens]
          Length = 101

 Score = 78.6 bits (192), Expect = 1e-15
 Identities = 37/87 (42%), Positives = 59/87 (67%)

Query: 22  LVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVV 81
           L+ L LL  P  +A A   A    +L+C+C++TT  V P+ I++L+V   GP C   +++
Sbjct: 14  LLFLGLLLLPLVVAFASAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKAGPHCPTAQLI 73

Query: 82  ASLKNGKEICLDPEAPFLKKVIQKILD 108
           A+LKNG++ICLD +AP  KK+I+K+L+
Sbjct: 74  ATLKNGRKICLDLQAPLYKKIIKKLLE 100


>gi|221219042 pro-platelet basic protein-like 1 [Homo sapiens]
          Length = 126

 Score = 73.6 bits (179), Expect = 3e-14
 Identities = 43/107 (40%), Positives = 68/107 (63%), Gaps = 12/107 (11%)

Query: 14  PSSSLCALLVLLLLLTQPGPIASAGPAAAVLR---------ELRCVCLQTTQGVHPK-MI 63
           P  +L  LL+L LLLT   P  + G +   L          EL CVC+++  G+HP  +I
Sbjct: 16  PFHALQVLLLLSLLLTAL-PSCTNGQSKRNLGKSKDSDLYIELCCVCVKSASGIHPSNII 74

Query: 64  SNLQVFAI-GPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDG 109
            N+ ++ + G  C+KV+V+A LK+G+++ LDPEAP +KK++QK+L+G
Sbjct: 75  PNIHIYLLSGAPCNKVQVIAMLKDGRKMYLDPEAPRIKKIVQKMLEG 121


>gi|4505735 platelet factor 4 variant 1 [Homo sapiens]
          Length = 104

 Score = 71.2 bits (173), Expect = 2e-13
 Identities = 34/87 (39%), Positives = 57/87 (65%)

Query: 22  LVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVV 81
           ++ L LL  P  +A A   A    +L+C+C++TT  V P+ I++L+V   GP C   +++
Sbjct: 17  MLFLALLLLPVVVAFARAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKAGPHCPTAQLI 76

Query: 82  ASLKNGKEICLDPEAPFLKKVIQKILD 108
           A+LKNG++ICLD +A   KK+I++ L+
Sbjct: 77  ATLKNGRKICLDLQALLYKKIIKEHLE 103


>gi|10834978 interleukin 8 precursor [Homo sapiens]
          Length = 99

 Score = 65.9 bits (159), Expect = 7e-12
 Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 3/94 (3%)

Query: 15  SSSLCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQT-TQGVHPKMISNLQVFAIGP 73
           +S L   L+   L++      +  P +A  +ELRC C++T ++  HPK I  L+V   GP
Sbjct: 2   TSKLAVALLAAFLISAALCEGAVLPRSA--KELRCQCIKTYSKPFHPKFIKELRVIESGP 59

Query: 74  QCSKVEVVASLKNGKEICLDPEAPFLKKVIQKIL 107
            C+  E++  L +G+E+CLDP+  ++++V++K L
Sbjct: 60  HCANTEIIVKLSDGRELCLDPKENWVQRVVEKFL 93


>gi|4505187 small inducible cytokine B9 precursor [Homo sapiens]
          Length = 125

 Score = 64.7 bits (156), Expect = 2e-11
 Identities = 31/89 (34%), Positives = 55/89 (61%), Gaps = 10/89 (11%)

Query: 18  LCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQG-VHPKMISNLQVFAIGPQCS 76
           L  +++L+L+  Q  P+   G         RC C+ T QG +H + + +L+ FA  P C 
Sbjct: 9   LLGIILLVLIGVQGTPVVRKG---------RCSCISTNQGTIHLQSLKDLKQFAPSPSCE 59

Query: 77  KVEVVASLKNGKEICLDPEAPFLKKVIQK 105
           K+E++A+LKNG + CL+P++  +K++I+K
Sbjct: 60  KIEIIATLKNGVQTCLNPDSADVKELIKK 88


>gi|149999382 small inducible cytokine B10 precursor [Homo sapiens]
          Length = 98

 Score = 48.1 bits (113), Expect = 1e-06
 Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 11/91 (12%)

Query: 18  LCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQ-TTQGVHPKMISNLQVFAIGPQCS 76
           +C L+ L L   Q  P++         R +RC C+  + Q V+P+ +  L++      C 
Sbjct: 8   ICCLIFLTLSGIQGVPLS---------RTVRCTCISISNQPVNPRSLEKLEIIPASQFCP 58

Query: 77  KVEVVASL-KNGKEICLDPEAPFLKKVIQKI 106
           +VE++A++ K G++ CL+PE+  +K +++ +
Sbjct: 59  RVEIIATMKKKGEKRCLNPESKAIKNLLKAV 89


>gi|5453577 chemokine (C-X-C motif) ligand 13 (B-cell
           chemoattractant) [Homo sapiens]
          Length = 109

 Score = 45.4 bits (106), Expect = 9e-06
 Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)

Query: 22  LVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPK-MISNLQVFAIGPQCSKVEV 80
           L+L+LL++   P+   G        LRC C+Q +    P+  I  +Q+   G  C + E+
Sbjct: 8   LLLMLLVSSLSPVQ--GVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEI 65

Query: 81  VASLKNGKEICLDPEAPFLKKVIQ 104
           +   KN   +C+DP+A +++++++
Sbjct: 66  IVWKKNKSIVCVDPQAEWIQRMME 89


>gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]
          Length = 98

 Score = 40.0 bits (92), Expect = 4e-04
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 7/91 (7%)

Query: 17  SLCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPK-MISNLQVFAIGPQC 75
           +L   L LL+L T P P  S         +    CL  TQ   P  ++ N     I   C
Sbjct: 2   ALLLALSLLVLWTSPAPTLSG------TNDAEDCCLSVTQKPIPGYIVRNFHYLLIKDGC 55

Query: 76  SKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106
               VV +   G+++C  P+ P+++++IQ++
Sbjct: 56  RVPAVVFTTLRGRQLCAPPDQPWVERIIQRL 86


>gi|76563933 chemokine (C-X-C motif) ligand 12 (stromal cell-derived
           factor 1) isoform gamma [Homo sapiens]
          Length = 119

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 5/95 (5%)

Query: 20  ALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVE 79
           A +V++L+L       S G   ++    RC C      V    + +L++    P C+ ++
Sbjct: 3   AKVVVVLVLVLTALCLSDGKPVSL--SYRCPCRFFESHVARANVKHLKILNT-PNCA-LQ 58

Query: 80  VVASLKNG-KEICLDPEAPFLKKVIQKILDGGNKE 113
           +VA LKN  +++C+DP+  ++++ ++K L+ G +E
Sbjct: 59  IVARLKNNNRQVCIDPKLKWIQEYLEKALNKGRRE 93


>gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]
          Length = 93

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 20  ALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVE 79
           ALLV+L+LL        AGP  A + +  C        +  +++ +   +     C +  
Sbjct: 7   ALLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPLRVVKHF--YWTSDSCPRPG 64

Query: 80  VVASLKNGKEICLDPEAPFLKKVIQKI 106
           VV      KEIC DP  P++K ++ K+
Sbjct: 65  VVLLTFRDKEICADPRVPWVKMILNKL 91


>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
           sapiens]
          Length = 93

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)

Query: 17  SLCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCS 76
           S  AL VLL  +     + SA  AA       C    T++ +    I++   F    QCS
Sbjct: 4   STAALAVLLCTMALCNQVLSAPLAADT--PTACCFSYTSRQIPQNFIADY--FETSSQCS 59

Query: 77  KVEVVASLKNGKEICLDPEAPFLKKVIQKI 106
           K  V+   K G+++C DP   +++K +  +
Sbjct: 60  KPSVIFLTKRGRQVCADPSEEWVQKYVSDL 89


>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
           sapiens]
          Length = 93

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)

Query: 17  SLCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCS 76
           S  AL VLL  +     + SA  AA       C    T++ +    I++   F    QCS
Sbjct: 4   STAALAVLLCTMALCNQVLSAPLAADT--PTACCFSYTSRQIPQNFIADY--FETSSQCS 59

Query: 77  KVEVVASLKNGKEICLDPEAPFLKKVIQKI 106
           K  V+   K G+++C DP   +++K +  +
Sbjct: 60  KPSVIFLTKRGRQVCADPSEEWVQKYVSDL 89


>gi|10834988 chemokine (C-X-C motif) ligand 12 (stromal cell-derived
           factor 1) isoform beta [Homo sapiens]
          Length = 93

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 23/90 (25%), Positives = 49/90 (54%), Gaps = 5/90 (5%)

Query: 20  ALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVE 79
           A +V++L+L       S G   ++    RC C      V    + +L++    P C+ ++
Sbjct: 3   AKVVVVLVLVLTALCLSDGKPVSL--SYRCPCRFFESHVARANVKHLKILNT-PNCA-LQ 58

Query: 80  VVASLKNG-KEICLDPEAPFLKKVIQKILD 108
           +VA LKN  +++C+DP+  ++++ ++K L+
Sbjct: 59  IVARLKNNNRQVCIDPKLKWIQEYLEKALN 88


>gi|40316924 chemokine (C-X-C motif) ligand 12 (stromal cell-derived
           factor 1) isoform alpha [Homo sapiens]
          Length = 89

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 23/90 (25%), Positives = 49/90 (54%), Gaps = 5/90 (5%)

Query: 20  ALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVE 79
           A +V++L+L       S G   ++    RC C      V    + +L++    P C+ ++
Sbjct: 3   AKVVVVLVLVLTALCLSDGKPVSL--SYRCPCRFFESHVARANVKHLKILNT-PNCA-LQ 58

Query: 80  VVASLKNG-KEICLDPEAPFLKKVIQKILD 108
           +VA LKN  +++C+DP+  ++++ ++K L+
Sbjct: 59  IVARLKNNNRQVCIDPKLKWIQEYLEKALN 88


>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
          Length = 89

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 49  CVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106
           C  + T+  +  K I +       PQC K  V+   K G++IC DP   +++K I  +
Sbjct: 30  CCLVYTSWQIPQKFIVDYS--ETSPQCPKPGVILLTKRGRQICADPNKKWVQKYISDL 85


>gi|4885589 small inducible cytokine B11 precursor [Homo sapiens]
          Length = 94

 Score = 32.7 bits (73), Expect = 0.064
 Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 6/63 (9%)

Query: 48  RCVCLQTTQGVHPKMISNLQVFAI---GPQCSKVEVVASLKNGK-EICLDPEAPFLKKVI 103
           RC+C+    GV    +++++  +I      C K+EV+ +LK  K + CL+P++   + +I
Sbjct: 29  RCLCIGP--GVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLII 86

Query: 104 QKI 106
           +K+
Sbjct: 87  KKV 89


>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
          Length = 99

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 20  ALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVE 79
           ALL LLL+     P   A P +  +    C  +   +    ++ S  ++  I  QC K  
Sbjct: 6   ALLCLLLMAATFSPQGLAQPDSVSIPITCCFNVINRKIPIQRLESYTRITNI--QCPKEA 63

Query: 80  VVASLKNGKEICLDPEAPFLK 100
           V+   K GKE+C DP+  +++
Sbjct: 64  VIFKTKRGKEVCADPKERWVR 84


>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
          Length = 92

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 10/93 (10%)

Query: 15  SSSLCALLVLLLLLTQ-PGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGP 73
           +++L  LL  + L  Q    +A+  P A       C    T++ +    I++   F    
Sbjct: 5   TAALAVLLCTMALCNQFSASLAADTPTA-------CCFSYTSRQIPQNFIADY--FETSS 55

Query: 74  QCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106
           QCSK  V+   K  +++C DP   +++K +  +
Sbjct: 56  QCSKPGVIFLTKRSRQVCADPSEEWVQKYVSDL 88


>gi|117676403 HIV-1 rev binding protein 2 [Homo sapiens]
          Length = 381

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)

Query: 7   RAARVPGPSSSLCALLVLLL---LLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMI 63
           R  R+ GP  S    L LL    ++ Q   +++ GP +  L+E+R V L T + +HP  I
Sbjct: 160 RRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSG-LKEVRKVVLDTMKNIHP--I 216

Query: 64  SNLQVFAIGPQCSK 77
            N++   I  + +K
Sbjct: 217 YNIKSLMIKRELAK 230


>gi|38016937 lemur tyrosine kinase 2 [Homo sapiens]
          Length = 1503

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 12/88 (13%)

Query: 11 VPGPSSSLCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFA 70
          +PGP +    LL+LLL+L   G   SAG A            QT  G  P        F 
Sbjct: 1  MPGPPALRRRLLLLLLVLLIAG---SAGAAPLP---------QTGAGEAPPAAEVSSSFV 48

Query: 71 IGPQCSKVEVVASLKNGKEICLDPEAPF 98
          I   CS + ++  + N    C DPE  F
Sbjct: 49 ILCVCSLIILIVLIANCVSCCKDPEIDF 76


>gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo
           sapiens]
          Length = 113

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 69  FAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106
           F    +CSK  V+   K G+++C  P  P ++  ++K+
Sbjct: 71  FETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 108


>gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Homo
           sapiens]
          Length = 92

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 9/87 (10%)

Query: 17  SLCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCS 76
           SL  L+     L    P+ S  P A         C   T    P+    +  +     CS
Sbjct: 9   SLLVLVAAFCSLALSAPMGSDPPTAC--------CFSYTARKLPRNFV-VDYYETSSLCS 59

Query: 77  KVEVVASLKNGKEICLDPEAPFLKKVI 103
           +  VV   K GK++C DP   ++++ +
Sbjct: 60  QPAVVFQTKRGKQVCADPSESWVQEYV 86


>gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Homo
           sapiens]
          Length = 92

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 9/87 (10%)

Query: 17  SLCALLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCS 76
           SL  L+     L    P+ S  P A         C   T    P+    +  +     CS
Sbjct: 9   SLLVLVAAFCSLALSAPMGSDPPTAC--------CFSYTARKLPRNFV-VDYYETSSLCS 59

Query: 77  KVEVVASLKNGKEICLDPEAPFLKKVI 103
           +  VV   K GK++C DP   ++++ +
Sbjct: 60  QPAVVFQTKRGKQVCADPSESWVQEYV 86


>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
          Length = 98

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 5/87 (5%)

Query: 21  LLVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGP-QCSKVE 79
           LL LLL+     P   A P A  +    C    + +      +  L+ + I   +C +  
Sbjct: 7   LLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKK----ISLQRLKSYVITTSRCPQKA 62

Query: 80  VVASLKNGKEICLDPEAPFLKKVIQKI 106
           V+   K GKEIC DP+  +++  ++ +
Sbjct: 63  VIFRTKLGKEICADPKEKWVQNYMKHL 89


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,852,183
Number of Sequences: 37866
Number of extensions: 200601
Number of successful extensions: 700
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 641
Number of HSP's gapped (non-prelim): 62
length of query: 114
length of database: 18,247,518
effective HSP length: 84
effective length of query: 30
effective length of database: 15,066,774
effective search space: 452003220
effective search space used: 452003220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.