| Name: KRR1 | Sequence: fasta or formatted (381aa) | NCBI GI: 117676403 | |
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Description: HIV-1 rev binding protein 2
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 7.3 28 1 C cysteine 1.0 4 1 D aspartate 3.7 14 2 E glutamate 10.0 38 2 F phenylalanine 3.4 13 1 G glycine 3.4 13 1 H histidine 1.0 4 2 I isoleucine 6.3 24 3 K lysine 16.0 61 7 L leucine 8.4 32 2 M methionine 1.8 7 1 N asparagine 3.9 15 1 P proline 6.3 24 3 Q glutamine 3.9 15 1 R arginine 5.5 21 2 S serine 6.0 23 2 T threonine 4.2 16 2 V valine 5.0 19 2 W tryptophan 0.8 3 1 Y tyrosine 1.8 7 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 HIV-1 rev binding protein 2 INCENP 0.032 inner centromere protein antigens 135/155kDa isofor... INCENP 0.032 inner centromere protein antigens 135/155kDa isofor... NEFH 0.030 neurofilament, heavy polypeptide 200kDa MAP9 0.028 aster-associated protein LOC100133599 0.026 PREDICTED: hypothetical protein LOC100294088 0.026 PREDICTED: hypothetical protein, partial MAP1B 0.026 microtubule-associated protein 1B FAM133A 0.025 hypothetical protein LOC286499 TOP1 0.023 DNA topoisomerase I EIF5B 0.023 eukaryotic translation initiation factor 5B SFRS12 0.023 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.023 splicing factor, arginine/serine-rich 12 isoform b [... WDR87 0.023 NYD-SP11 protein PNO1 0.022 partner of NOB1 CCDC88A 0.021 coiled-coil domain containing 88A isoform 1 FAM133B 0.021 hypothetical protein LOC257415 isoform 2 FAM133B 0.021 hypothetical protein LOC257415 isoform 1 TRDN 0.019 triadin LOC402360 0.019 PREDICTED: similar to hCG1742476 LOC402360 0.019 PREDICTED: similar to hCG1742476 LOC402360 0.019 PREDICTED: hypothetical protein LOC402360 CCDC88A 0.019 coiled-coil domain containing 88A isoform 2 EEA1 0.019 early endosome antigen 1, 162kD CAGE1 0.019 cancer antigen 1 OFD1 0.019 oral-facial-digital syndrome 1 CCDC34 0.019 coiled-coil domain containing 34 isoform 1 CHAF1A 0.018 chromatin assembly factor 1, subunit A (p150) MAP7D2 0.017 MAP7 domain containing 2 LOC400986 0.017 PREDICTED: protein immuno-reactive with anti-PTH po...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
