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Search of human proteins with 4506841
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
(99 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506841 small inducible cytokine A2 precursor [Homo sapiens] 202 6e-53
gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens] 149 6e-37
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens] 145 5e-36
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens] 140 3e-34
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens] 134 2e-32
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... 72 9e-14
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... 72 9e-14
gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... 70 3e-13
gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... 69 6e-13
gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... 69 6e-13
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens] 64 2e-11
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens] 62 1e-10
gi|22538814 small inducible cytokine A5 precursor [Homo sapiens] 58 2e-09
gi|4506835 small inducible cytokine A21 precursor [Homo sapiens] 55 1e-08
gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor ... 52 8e-08
gi|4759074 small inducible cytokine A16 precursor [Homo sapiens] 52 1e-07
gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor ... 51 2e-07
gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens] 50 4e-07
gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo sapi... 49 1e-06
gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens] 49 1e-06
gi|22538804 small inducible cytokine A22 precursor [Homo sapiens] 47 2e-06
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens] 47 2e-06
gi|4506833 small inducible cytokine A1 precursor [Homo sapiens] 47 3e-06
gi|22538808 small inducible cytokine A23 isoform CKbeta8 precurs... 45 2e-05
gi|4506829 small inducible cytokine A17 precursor [Homo sapiens] 44 3e-05
gi|22538806 small inducible cytokine A23 isoform CKbeta8-1 precu... 43 6e-05
gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens] 42 1e-04
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens] 42 1e-04
gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo sap... 41 2e-04
gi|4759076 chemokine (C-C motif) ligand 20 isoform 1 [Homo sapiens] 41 2e-04
>gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
Length = 99
Score = 202 bits (513), Expect = 6e-53
Identities = 99/99 (100%), Positives = 99/99 (100%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP
Sbjct: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
Query: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQTQTPKT 99
KEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQTQTPKT
Sbjct: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQTQTPKT 99
>gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo
sapiens]
Length = 99
Score = 149 bits (375), Expect = 6e-37
Identities = 73/98 (74%), Positives = 77/98 (78%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
MK SAALLCLLL AA F PQGLAQP IN TCCY F N+KI QRL SYRR TSS CP
Sbjct: 1 MKASAALLCLLLTAAAFSPQGLAQPVGINTSTTCCYRFINKKIPKQRLESYRRTTSSHCP 60
Query: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQTQTPK 98
+EAVIFKT + KEICADP QKWVQD M HLDK+TQTPK
Sbjct: 61 REAVIFKTKLDKEICADPTQKWVQDFMKHLDKKTQTPK 98
>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
Length = 99
Score = 145 bits (367), Expect = 5e-36
Identities = 68/98 (69%), Positives = 82/98 (83%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
MKVSAALLCLLL+AATF PQGLAQPD+++ P+TCC+N NRKI +QRL SY RIT+ +CP
Sbjct: 1 MKVSAALLCLLLMAATFSPQGLAQPDSVSIPITCCFNVINRKIPIQRLESYTRITNIQCP 60
Query: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQTQTPK 98
KEAVIFKT KE+CADPK++WV+DSM HLD+ Q K
Sbjct: 61 KEAVIFKTKRGKEVCADPKERWVRDSMKHLDQIFQNLK 98
>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
Length = 97
Score = 140 bits (352), Expect = 3e-34
Identities = 69/98 (70%), Positives = 82/98 (83%), Gaps = 2/98 (2%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
MKVSAALL LLLIAA F PQGLA P ++ P TCC+N NRKI +QRL SYRRITS KCP
Sbjct: 1 MKVSAALLWLLLIAAAFSPQGLAGPASV--PTTCCFNLANRKIPLQRLESYRRITSGKCP 58
Query: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQTQTPK 98
++AVIFKT +AK+ICADPK+KWVQDSM +LD+++ TPK
Sbjct: 59 QKAVIFKTKLAKDICADPKKKWVQDSMKYLDQKSPTPK 96
>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
Length = 98
Score = 134 bits (337), Expect = 2e-32
Identities = 64/99 (64%), Positives = 81/99 (81%), Gaps = 1/99 (1%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
MKVSA LLCLLL+ A F PQGLAQPDA+N P TCC+ F+++KIS+QRL SY IT+S+CP
Sbjct: 1 MKVSAVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSY-VITTSRCP 59
Query: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQTQTPKT 99
++AVIF+T + KEICADPK+KWVQ+ M HL ++ T KT
Sbjct: 60 QKAVIFRTKLGKEICADPKEKWVQNYMKHLGRKAHTLKT 98
>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
sapiens]
Length = 93
Score = 72.0 bits (175), Expect = 9e-14
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
M+VS A L +LL Q L+ P A + P CC+++T+R+I +A Y TSS+C
Sbjct: 1 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFE-TSSQCS 59
Query: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91
K +VIF T +++CADP ++WVQ + L+
Sbjct: 60 KPSVIFLTKRGRQVCADPSEEWVQKYVSDLE 90
>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
sapiens]
Length = 93
Score = 72.0 bits (175), Expect = 9e-14
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
M+VS A L +LL Q L+ P A + P CC+++T+R+I +A Y TSS+C
Sbjct: 1 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFE-TSSQCS 59
Query: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91
K +VIF T +++CADP ++WVQ + L+
Sbjct: 60 KPSVIFLTKRGRQVCADPSEEWVQKYVSDLE 90
>gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Homo
sapiens]
Length = 92
Score = 70.5 bits (171), Expect = 3e-13
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
MK+ +L LL++ A F L+ P + P CC+++T RK+ + Y TSS C
Sbjct: 1 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYE-TSSLCS 59
Query: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91
+ AV+F+T +K++CADP + WVQ+ + L+
Sbjct: 60 QPAVVFQTKRSKQVCADPSESWVQEYVYDLE 90
>gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Homo
sapiens]
Length = 92
Score = 69.3 bits (168), Expect = 6e-13
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
MK+ +L LL++ A F L+ P + P CC+++T RK+ + Y TSS C
Sbjct: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYE-TSSLCS 59
Query: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91
+ AV+F+T K++CADP + WVQ+ + L+
Sbjct: 60 QPAVVFQTKRGKQVCADPSESWVQEYVYDLE 90
>gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Homo
sapiens]
Length = 92
Score = 69.3 bits (168), Expect = 6e-13
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
MK+ +L LL++ A F L+ P + P CC+++T RK+ + Y TSS C
Sbjct: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYE-TSSLCS 59
Query: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91
+ AV+F+T K++CADP + WVQ+ + L+
Sbjct: 60 QPAVVFQTKRGKQVCADPSESWVQEYVYDLE 90
>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
Length = 92
Score = 64.3 bits (155), Expect = 2e-11
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
M+VS A L +LL Q A A + P CC+++T+R+I +A Y TSS+C
Sbjct: 1 MQVSTAALAVLLCTMALCNQFSASL-AADTPTACCFSYTSRQIPQNFIADYFE-TSSQCS 58
Query: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91
K VIF T ++++CADP ++WVQ + L+
Sbjct: 59 KPGVIFLTKRSRQVCADPSEEWVQKYVSDLE 89
>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
Length = 119
Score = 62.0 bits (149), Expect = 1e-10
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
M + +LL L + A IP G ++ P CC F +++I R+ SY+ + S C
Sbjct: 5 MTIVTSLLFLGVCAHHIIPTG-----SVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCL 59
Query: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91
K VIF T ++ C DPKQ+WVQ M +LD
Sbjct: 60 KAGVIFTTKKGQQFCGDPKQEWVQRYMKNLD 90
>gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]
Length = 91
Score = 57.8 bits (138), Expect = 2e-09
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
MKVSAA L ++LIA A P + + CC+ + R + + Y TS KC
Sbjct: 1 MKVSAAALAVILIATALCAPASASPYSSDT-TPCCFAYIARPLPRAHIKEYF-YTSGKCS 58
Query: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91
AV+F T +++CA+P++KWV++ ++ L+
Sbjct: 59 NPAVVFVTRKNRQVCANPEKKWVREYINSLE 89
>gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]
Length = 134
Score = 55.1 bits (131), Expect = 1e-08
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSK-C 59
M S AL L+L+ A IP+ CC ++ RKI + + SYR+ S C
Sbjct: 1 MAQSLALSLLILVLAFGIPRTQGSDGGAQ---DCCLKYSQRKIPAKVVRSYRKQEPSLGC 57
Query: 60 PKEAVIF--KTIVAKEICADPKQKWVQDSMDHLDKQTQTPK 98
A++F + E+CADPK+ WVQ M HLDK T +P+
Sbjct: 58 SIPAILFLPRKRSQAELCADPKELWVQQLMQHLDK-TPSPQ 97
>gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor
[Homo sapiens]
Length = 93
Score = 52.4 bits (124), Expect = 8e-08
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 1 MKVS-AALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKC 59
MK+S AA+ LLI + + P CC+ +T KI QR+ Y T+S+C
Sbjct: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYE-TNSQC 59
Query: 60 PKEAVIFKTIVAKEICADPKQKWVQD 85
K ++F T +C +P KWVQD
Sbjct: 60 SKPGIVFITKRGHSVCTNPSDKWVQD 85
>gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]
Length = 120
Score = 52.0 bits (123), Expect = 1e-07
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDA---INAPVTCCYNFTNRKISVQRLASYRRITSS 57
MKVS A L LL++ +QP +N P TCC + + + + + YR+ +
Sbjct: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRK--AL 58
Query: 58 KCPKEAVIFKTIVAKEICADPKQKWVQD 85
C A+IF T +E+C +P WVQ+
Sbjct: 59 NCHLPAIIFVTKRNREVCTNPNDDWVQE 86
>gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor
[Homo sapiens]
Length = 109
Score = 51.2 bits (121), Expect = 2e-07
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 31 PVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQD 85
P CC+ +T KI QR+ Y T+S+C K ++F T +C +P KWVQD
Sbjct: 48 PSECCFTYTTYKIPRQRIMDYYE-TNSQCSKPGIVFITKRGHSVCTNPSDKWVQD 101
>gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens]
Length = 397
Score = 50.1 bits (118), Expect = 4e-07
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 35 CYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQ 93
C T+ KI V L Y++ +S C K A+I +T + CADPK++WV+D+M HLD+Q
Sbjct: 36 CSKMTS-KIPVALLIHYQQNQAS-CGKRAIILETRQHRLFCADPKEQWVKDAMQHLDRQ 92
>gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo
sapiens]
Length = 113
Score = 48.5 bits (114), Expect = 1e-06
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 1 MKVS-AALLCLLLIA-----ATFIPQG----------LAQPDAINA---PVTCCYNFTNR 41
MKVS AAL CL+L+A A FI L P +N+ CC ++ ++
Sbjct: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
Query: 42 KISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 90
I + SY TSS+C K VIF T +++CA P VQD M L
Sbjct: 61 SIPCSLMKSYFE-TSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 108
>gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo
sapiens]
Length = 94
Score = 48.5 bits (114), Expect = 1e-06
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 33 TCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDK 92
TCC+ ++++ + + SY TS+ C + AVIF T K++C P++KWVQ + L
Sbjct: 32 TCCFQYSHKPLPWTWVRSYE-FTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYISLL-- 88
Query: 93 QTQTPK 98
+TPK
Sbjct: 89 --KTPK 92
>gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]
Length = 93
Score = 47.4 bits (111), Expect = 2e-06
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 2 KVSAALLCLLLIAATFIPQGLAQPDAINAPVT-CCYNFTNRKISVQRLASYRRITSSKCP 60
++ ALL +L++ A + A P N + CC ++ ++ + R+ + TS CP
Sbjct: 3 RLQTALLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPL-RVVKHFYWTSDSCP 61
Query: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLDK 92
+ V+ T KEICADP+ WV+ ++ L +
Sbjct: 62 RPGVVLLTFRDKEICADPRVPWVKMILNKLSQ 93
>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
Length = 89
Score = 47.4 bits (111), Expect = 2e-06
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 34 CCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 90
CC +T+ +I + + Y TS +CPK VI T ++ICADP +KWVQ + L
Sbjct: 30 CCLVYTSWQIPQKFIVDYSE-TSPQCPKPGVILLTKRGRQICADPNKKWVQKYISDL 85
>gi|4506833 small inducible cytokine A1 precursor [Homo sapiens]
Length = 96
Score = 47.0 bits (110), Expect = 3e-06
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 3 VSAALLCLLLIAATFIPQGLAQPDAINAPVT-CCYNFTNRKISVQRLASYRRITSSKCPK 61
++ AL+CLLL A P+ + ++ P + CC++F ++I ++ + YR TSS C
Sbjct: 4 ITTALVCLLL--AGMWPEDV-DSKSMQVPFSRCCFSFAEQEIPLRAILCYRN-TSSICSN 59
Query: 62 EAVIFKTIVAKEICADPKQKWVQ 84
E +IFK KE CA WVQ
Sbjct: 60 EGLIFKLKRGKEACALDTVGWVQ 82
>gi|22538808 small inducible cytokine A23 isoform CKbeta8 precursor
[Homo sapiens]
Length = 120
Score = 44.7 bits (104), Expect = 2e-05
Identities = 39/120 (32%), Positives = 50/120 (41%), Gaps = 23/120 (19%)
Query: 1 MKVSAALLCLLLIAATFIPQGLAQPDA----------INAPVT----------CCYNFTN 40
MKVS A L L++ Q DA + PV CC ++T
Sbjct: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
Query: 41 RKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQ--DSMDHLDKQTQTPK 98
R I L SY T+S+C K VIF T + CA+P K VQ M LD + +T K
Sbjct: 61 RSIPCSLLESYFE-TNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLDTRIKTRK 119
>gi|4506829 small inducible cytokine A17 precursor [Homo sapiens]
Length = 94
Score = 43.9 bits (102), Expect = 3e-05
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 6 ALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVI 65
AL+ LLL A+ Q + N CC + I +++L ++ + TS C ++A++
Sbjct: 8 ALVTLLLGASL---QHIHAARGTNVGRECCLEYFKGAIPLRKLKTWYQ-TSEDCSRDAIV 63
Query: 66 FKTIVAKEICADPKQKWVQDSMDHL 90
F T+ + IC+DP K V++++ +L
Sbjct: 64 FVTVQGRAICSDPNNKRVKNAVKYL 88
>gi|22538806 small inducible cytokine A23 isoform CKbeta8-1
precursor [Homo sapiens]
Length = 137
Score = 42.7 bits (99), Expect = 6e-05
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 34 CCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQ--DSMDHLD 91
CC ++T R I L SY T+S+C K VIF T + CA+P K VQ M LD
Sbjct: 71 CCISYTPRSIPCSLLESYFE-TNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLD 129
Query: 92 KQTQTPK 98
+ +T K
Sbjct: 130 TRIKTRK 136
>gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]
Length = 114
Score = 42.0 bits (97), Expect = 1e-04
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 35 CYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQT 94
C + T +++ V R+ +Y T ++ AVIF T ++CADP+ WV+D + +D+++
Sbjct: 32 CVSLTTQRLPVSRIKTY---TITEGSLRAVIFITKRGLKVCADPQATWVRDVVRSMDRKS 88
Query: 95 QT 96
T
Sbjct: 89 NT 90
>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
Length = 114
Score = 42.0 bits (97), Expect = 1e-04
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 35 CYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQT 94
C + T +++ V R+ +Y T ++ AVIF T ++CADP+ WV+D + +D+++
Sbjct: 32 CVSLTTQRLPVSRIKTY---TITEGSLRAVIFITKRGLKVCADPQATWVRDVVRSMDRKS 88
Query: 95 QT 96
T
Sbjct: 89 NT 90
>gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo
sapiens]
Length = 95
Score = 40.8 bits (94), Expect = 2e-04
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 34 CCYNFTNRKISVQRLASY-RRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDK 92
CC +T+R + + + + R++ + C A+IF T +CA+PKQ WV+ + L K
Sbjct: 31 CCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVRLLSK 90
Query: 93 QTQ 95
+ +
Sbjct: 91 KVK 93
>gi|4759076 chemokine (C-C motif) ligand 20 isoform 1 [Homo
sapiens]
Length = 96
Score = 40.8 bits (94), Expect = 2e-04
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 34 CCYNFTNRKISVQRLASY-RRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDK 92
CC +T+R + + + + R++ + C A+IF T +CA+PKQ WV+ + L K
Sbjct: 32 CCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVRLLSK 91
Query: 93 QTQ 95
+ +
Sbjct: 92 KVK 94
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.131 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,583,386
Number of Sequences: 37866
Number of extensions: 115835
Number of successful extensions: 299
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 249
Number of HSP's gapped (non-prelim): 38
length of query: 99
length of database: 18,247,518
effective HSP length: 70
effective length of query: 29
effective length of database: 15,596,898
effective search space: 452310042
effective search space used: 452310042
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.