PSMA3 29242

Name: PSMA3	Sequence: fasta or formatted (255aa)		NCBI GI: 4506183
Description: proteasome alpha 3 subunit isoform 1		Referenced in: Proteasome
Other entries for this name: alt prot [248aa] proteasome alpha 3 subunit isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 24 2 C cysteine 1.6 4 1 D aspartate 6.7 17 3 E glutamate 9.0 23 2 F phenylalanine 3.5 9 1 G glycine 7.5 19 1 H histidine 2.0 5 1 I isoleucine 5.5 14 2 K lysine 7.1 18 1 L leucine 7.1 18 2 M methionine 3.5 9 1 N asparagine 3.5 9 1 P proline 2.0 5 1 Q glutamine 1.6 4 1 R arginine 5.1 13 1 S serine 8.2 21 2 T threonine 2.7 7 1 V valine 8.2 21 2 W tryptophan 0.8 2 1 Y tyrosine 5.1 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome alpha 3 subunit isoform 1 PSMA3 0.957 proteasome alpha 3 subunit isoform 2 PSMA5 0.209 proteasome alpha 5 subunit PSMA7 0.207 proteasome alpha 7 subunit PSMA8 0.200 proteasome alpha 8 subunit isoform 2 PSMA6 0.190 proteasome alpha 6 subunit PSMA8 0.186 proteasome alpha 8 subunit isoform 1 PSMA2 0.178 proteasome subunit alpha type 2 PSMA4 0.178 proteasome alpha 4 subunit isoform 1 PSMA4 0.178 proteasome alpha 4 subunit isoform 1 PSMA1 0.149 proteasome alpha 1 subunit isoform 2 PSMA1 0.149 proteasome alpha 1 subunit isoform 1 PSMA8 0.116 proteasome alpha 8 subunit isoform 3 PSMA1 0.107 proteasome alpha 1 subunit isoform 3 PSMA4 0.079 proteasome alpha 4 subunit isoform 2 LOC121906 0.072 PREDICTED: similar to hCG30646 LOC121906 0.072 PREDICTED: similar to hCG30646 LOC121906 0.072 PREDICTED: similar to hCG30646 GUCY1A2 0.017 guanylate cyclase 1, soluble, alpha 2 LRRFIP1 0.010 leucine rich repeat (in FLII) interacting protein 1... TBCB 0.010 cytoskeleton associated protein 1 ARID4B 0.010 AT rich interactive domain 4B isoform 1 PRKD1 0.006 protein kinase D1 HEATR5B 0.006 HEAT repeat containing 5B CHD5 0.006 chromodomain helicase DNA binding protein 5 KIF16B 0.006 kinesin-like motor protein C20orf23 HSPA9 0.006 heat shock 70kDa protein 9 precursor ZNF268 0.006 zinc finger protein 268 MAP1B 0.006 microtubule-associated protein 1B GBP6 0.006 guanylate binding protein family, member 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.