PSMA5 15773

Name: PSMA5	Sequence: fasta or formatted (241aa)		NCBI GI: 23110942
Description: proteasome alpha 5 subunit		Referenced in: Proteasome
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 21 1 C cysteine 1.2 3 1 D aspartate 4.1 10 1 E glutamate 10.4 25 2 F phenylalanine 4.6 11 1 G glycine 7.1 17 2 H histidine 2.1 5 1 I isoleucine 7.5 18 2 K lysine 5.4 13 1 L leucine 7.9 19 2 M methionine 3.7 9 1 N asparagine 2.9 7 1 P proline 3.3 8 1 Q glutamine 5.0 12 1 R arginine 2.9 7 1 S serine 7.9 19 2 T threonine 6.6 16 1 V valine 6.6 16 1 W tryptophan 0.4 1 1 Y tyrosine 1.7 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome alpha 5 subunit PSMA8 0.295 proteasome alpha 8 subunit isoform 2 PSMA7 0.284 proteasome alpha 7 subunit PSMA8 0.282 proteasome alpha 8 subunit isoform 1 PSMA2 0.242 proteasome subunit alpha type 2 PSMA4 0.233 proteasome alpha 4 subunit isoform 1 PSMA4 0.233 proteasome alpha 4 subunit isoform 1 PSMA3 0.226 proteasome alpha 3 subunit isoform 1 PSMA3 0.217 proteasome alpha 3 subunit isoform 2 PSMA1 0.215 proteasome alpha 1 subunit isoform 2 PSMA1 0.215 proteasome alpha 1 subunit isoform 1 PSMA8 0.213 proteasome alpha 8 subunit isoform 3 PSMA6 0.201 proteasome alpha 6 subunit PSMA4 0.121 proteasome alpha 4 subunit isoform 2 PSMA1 0.119 proteasome alpha 1 subunit isoform 3 PSMB10 0.092 proteasome beta 10 subunit proprotein PSMB8 0.065 proteasome beta 8 subunit isoform E2 proprotein [Hom... PSMB8 0.065 proteasome beta 8 subunit isoform E1 proprotein [Homo... PSMB7 0.054 proteasome beta 7 subunit proprotein PSMB11 0.049 proteasome beta 11 subunit PSMB5 0.049 proteasome beta 5 subunit isoform 1 LOC121906 0.038 PREDICTED: similar to hCG30646 LOC121906 0.038 PREDICTED: similar to hCG30646 LOC121906 0.038 PREDICTED: similar to hCG30646 PSMB9 0.036 proteasome beta 9 subunit isoform 2 proprotein [Homo... PSMB9 0.036 proteasome beta 9 subunit isoform 1 proprotein DST 0.016 dystonin isoform 4 DST 0.016 dystonin isoform 3 DST 0.016 dystonin isoform 2 DST 0.016 dystonin isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.