PSMA8 34801

Name: PSMA8	Sequence: fasta or formatted (250aa)		NCBI GI: 68303563
Description: proteasome alpha 8 subunit isoform 2		Referenced in: Proteasome
Other entries for this name: alt prot [256aa] proteasome alpha 8 subunit isoform 1 alt prot [212aa] proteasome alpha 8 subunit isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.4 26 1 C cysteine 1.2 3 1 D aspartate 5.2 13 3 E glutamate 8.4 21 2 F phenylalanine 3.2 8 1 G glycine 5.6 14 2 H histidine 1.6 4 1 I isoleucine 7.2 18 2 K lysine 9.6 24 3 L leucine 6.4 16 2 M methionine 1.2 3 1 N asparagine 2.8 7 1 P proline 2.0 5 1 Q glutamine 3.6 9 1 R arginine 6.4 16 2 S serine 6.4 16 1 T threonine 6.0 15 1 V valine 9.2 23 2 W tryptophan 0.4 1 1 Y tyrosine 3.2 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome alpha 8 subunit isoform 2 PSMA8 0.987 proteasome alpha 8 subunit isoform 1 PSMA7 0.850 proteasome alpha 7 subunit PSMA8 0.798 proteasome alpha 8 subunit isoform 3 PSMA4 0.313 proteasome alpha 4 subunit isoform 1 PSMA4 0.313 proteasome alpha 4 subunit isoform 1 PSMA2 0.291 proteasome subunit alpha type 2 PSMA5 0.287 proteasome alpha 5 subunit PSMA1 0.252 proteasome alpha 1 subunit isoform 2 PSMA1 0.252 proteasome alpha 1 subunit isoform 1 PSMA6 0.215 proteasome alpha 6 subunit PSMA3 0.211 proteasome alpha 3 subunit isoform 1 PSMA3 0.200 proteasome alpha 3 subunit isoform 2 PSMA4 0.198 proteasome alpha 4 subunit isoform 2 PSMA1 0.126 proteasome alpha 1 subunit isoform 3 LOC121906 0.052 PREDICTED: similar to hCG30646 LOC121906 0.052 PREDICTED: similar to hCG30646 LOC121906 0.052 PREDICTED: similar to hCG30646 PSMB10 0.039 proteasome beta 10 subunit proprotein PSMB9 0.035 proteasome beta 9 subunit isoform 2 proprotein [Homo... PSMB9 0.035 proteasome beta 9 subunit isoform 1 proprotein PSMB5 0.026 proteasome beta 5 subunit isoform 1 CCDC91 0.020 GGA binding partner PSMB1 0.017 proteasome beta 1 subunit PSMB5 0.009 proteasome beta 5 subunit isoform 3 INCENP 0.009 inner centromere protein antigens 135/155kDa isofor... GCC2 0.009 GRIP and coiled-coil domain-containing 2 CEP290 0.007 centrosomal protein 290kDa RANGAP1 0.007 Ran GTPase activating protein 1 PARD3 0.007 partitioning-defective protein 3 homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.