PSMA3 15772

Name: PSMA3	Sequence: fasta or formatted (248aa)		NCBI GI: 23110939
Description: proteasome alpha 3 subunit isoform 2		Referenced in: Proteasome
Other entries for this name: alt prot [255aa] proteasome alpha 3 subunit isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.7 24 2 C cysteine 1.6 4 1 D aspartate 6.9 17 3 E glutamate 9.3 23 2 F phenylalanine 3.2 8 1 G glycine 7.3 18 1 H histidine 2.0 5 1 I isoleucine 5.6 14 2 K lysine 7.3 18 1 L leucine 6.9 17 2 M methionine 3.2 8 1 N asparagine 3.6 9 1 P proline 2.0 5 1 Q glutamine 1.6 4 1 R arginine 5.2 13 1 S serine 7.7 19 2 T threonine 2.8 7 1 V valine 8.5 21 2 W tryptophan 0.8 2 1 Y tyrosine 4.8 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome alpha 3 subunit isoform 2 PSMA3 0.985 proteasome alpha 3 subunit isoform 1 PSMA5 0.206 proteasome alpha 5 subunit PSMA7 0.200 proteasome alpha 7 subunit PSMA8 0.196 proteasome alpha 8 subunit isoform 2 PSMA6 0.183 proteasome alpha 6 subunit PSMA8 0.183 proteasome alpha 8 subunit isoform 1 PSMA2 0.181 proteasome subunit alpha type 2 PSMA4 0.170 proteasome alpha 4 subunit isoform 1 PSMA4 0.170 proteasome alpha 4 subunit isoform 1 PSMA1 0.140 proteasome alpha 1 subunit isoform 2 PSMA1 0.140 proteasome alpha 1 subunit isoform 1 PSMA8 0.111 proteasome alpha 8 subunit isoform 3 PSMA1 0.111 proteasome alpha 1 subunit isoform 3 LOC121906 0.074 PREDICTED: similar to hCG30646 LOC121906 0.074 PREDICTED: similar to hCG30646 LOC121906 0.074 PREDICTED: similar to hCG30646 PSMA4 0.070 proteasome alpha 4 subunit isoform 2 GUCY1A2 0.017 guanylate cyclase 1, soluble, alpha 2 DOCK5 0.017 dedicator of cytokinesis 5 LRRFIP1 0.011 leucine rich repeat (in FLII) interacting protein 1... ARID4B 0.011 AT rich interactive domain 4B isoform 1 DAPK2 0.006 death-associated kinase 2 HEATR5B 0.006 HEAT repeat containing 5B CHD5 0.006 chromodomain helicase DNA binding protein 5 KIF16B 0.006 kinesin-like motor protein C20orf23 HSPA9 0.006 heat shock 70kDa protein 9 precursor MAP1B 0.006 microtubule-associated protein 1B ARGLU1 0.006 arginine and glutamate rich 1 LAMC1 0.006 laminin, gamma 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.