TBCB 31632

Name: TBCB	Sequence: fasta or formatted (244aa)		NCBI GI: 50428925
Description: cytoskeleton associated protein 1		Referenced in: Dynein and Dynactin
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 18 2 C cysteine 2.0 5 1 D aspartate 6.6 16 2 E glutamate 9.8 24 3 F phenylalanine 3.7 9 1 G glycine 8.2 20 1 H histidine 0.8 2 1 I isoleucine 3.3 8 1 K lysine 5.7 14 1 L leucine 7.0 17 2 M methionine 1.2 3 1 N asparagine 1.6 4 1 P proline 3.7 9 1 Q glutamine 4.1 10 2 R arginine 7.4 18 2 S serine 8.6 21 3 T threonine 4.1 10 1 V valine 8.6 21 2 W tryptophan 0.4 1 1 Y tyrosine 5.7 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cytoskeleton associated protein 1 CLIP4 0.112 CAP-GLY domain containing linker protein family, mem... CLIP1 0.105 restin isoform b CLIP1 0.105 restin isoform a DCTN1 0.105 dynactin 1 isoform 3 DCTN1 0.105 dynactin 1 isoform 1 KIF13B 0.105 kinesin family member 13B CLIP2 0.097 CAP-GLY domain containing linker protein 2 isoform ... CLIP2 0.097 CAP-GLY domain containing linker protein 2 isoform 2... CLIP3 0.097 CAP-GLY domain containing linker protein 3 CEP350 0.067 centrosome-associated protein 350 TBCE 0.045 beta-tubulin cofactor E TBCE 0.045 beta-tubulin cofactor E CYLD 0.024 ubiquitin carboxyl-terminal hydrolase CYLD isoform ... CYLD 0.024 ubiquitin carboxyl-terminal hydrolase CYLD isoform 1... CYLD 0.024 ubiquitin carboxyl-terminal hydrolase CYLD isoform ... CTTN 0.017 cortactin isoform a CTTN 0.017 cortactin isoform b MAP7D2 0.017 MAP7 domain containing 2 AKAP12 0.011 A kinase (PRKA) anchor protein 12 isoform 1 AKAP12 0.011 A kinase (PRKA) anchor protein 12 isoform 2 PSMA3 0.011 proteasome alpha 3 subunit isoform 1 SUPT16H 0.011 chromatin-specific transcription elongation factor la... CEP250 0.011 centrosomal protein 2 CCHCR1 0.011 coiled-coil alpha-helical rod protein 1 isoform 1 [... CCHCR1 0.011 coiled-coil alpha-helical rod protein 1 isoform 2 [... CCHCR1 0.011 coiled-coil alpha-helical rod protein 1 isoform 3 [... MYH7B 0.011 myosin, heavy polypeptide 7B, cardiac muscle, beta ... LOC730130 0.011 hypothetical protein LOC730130 CALD1 0.011 caldesmon 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.