PSMA6 15774

Name: PSMA6	Sequence: fasta or formatted (246aa)		NCBI GI: 23110944
Description: proteasome alpha 6 subunit		Referenced in: Proteasome
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 20 2 C cysteine 3.3 8 2 D aspartate 5.3 13 1 E glutamate 7.3 18 2 F phenylalanine 4.1 10 1 G glycine 6.5 16 2 H histidine 1.2 3 1 I isoleucine 6.9 17 1 K lysine 7.7 19 3 L leucine 5.7 14 2 M methionine 2.4 6 1 N asparagine 2.0 5 1 P proline 3.3 8 1 Q glutamine 4.5 11 1 R arginine 4.5 11 1 S serine 6.1 15 2 T threonine 7.7 19 1 V valine 8.5 21 2 W tryptophan 0.8 2 1 Y tyrosine 4.1 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome alpha 6 subunit LOC121906 0.427 PREDICTED: similar to hCG30646 LOC121906 0.427 PREDICTED: similar to hCG30646 LOC121906 0.427 PREDICTED: similar to hCG30646 PSMA2 0.231 proteasome subunit alpha type 2 PSMA7 0.227 proteasome alpha 7 subunit PSMA4 0.225 proteasome alpha 4 subunit isoform 1 PSMA4 0.225 proteasome alpha 4 subunit isoform 1 PSMA8 0.210 proteasome alpha 8 subunit isoform 2 PSMA8 0.200 proteasome alpha 8 subunit isoform 1 PSMA3 0.195 proteasome alpha 3 subunit isoform 1 PSMA5 0.191 proteasome alpha 5 subunit PSMA3 0.183 proteasome alpha 3 subunit isoform 2 PSMA1 0.168 proteasome alpha 1 subunit isoform 2 PSMA1 0.168 proteasome alpha 1 subunit isoform 1 PSMA8 0.142 proteasome alpha 8 subunit isoform 3 PSMA4 0.127 proteasome alpha 4 subunit isoform 2 PSMA1 0.083 proteasome alpha 1 subunit isoform 3 LOC729501 0.021 PREDICTED: zinc finger protein ENSP00000344568-like... PSMB2 0.019 proteasome beta 2 subunit PSMB1 0.013 proteasome beta 1 subunit PSMB10 0.013 proteasome beta 10 subunit proprotein IL34 0.011 interleukin 34 DHTKD1 0.008 dehydrogenase E1 and transketolase domain containing... LOC100288765 0.006 PREDICTED: hypothetical protein XP_002342966 TET1 0.006 CXXC finger 6 IGF2R 0.006 insulin-like growth factor 2 receptor precursor [Ho... PSMB9 0.006 proteasome beta 9 subunit isoform 2 proprotein [Homo... PSMB9 0.006 proteasome beta 9 subunit isoform 1 proprotein FZD3 0.006 frizzled 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.