PSMA4 6038

Name: PSMA4	Sequence: fasta or formatted (190aa)		NCBI GI: 156713444
Description: proteasome alpha 4 subunit isoform 2		Referenced in: Proteasome
Other entries for this name: alt prot [261aa] proteasome alpha 4 subunit isoform 1 alt prot [261aa] proteasome alpha 4 subunit isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 17 3 C cysteine 2.1 4 1 D aspartate 3.7 7 1 E glutamate 10.0 19 4 F phenylalanine 1.6 3 1 G glycine 6.3 12 2 H histidine 1.1 2 1 I isoleucine 5.3 10 1 K lysine 12.1 23 2 L leucine 10.0 19 2 M methionine 2.1 4 1 N asparagine 3.7 7 2 P proline 2.1 4 1 Q glutamine 6.3 12 1 R arginine 3.2 6 1 S serine 5.3 10 1 T threonine 5.3 10 1 V valine 5.8 11 1 W tryptophan 1.1 2 1 Y tyrosine 4.2 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome alpha 4 subunit isoform 2 PSMA4 1.000 proteasome alpha 4 subunit isoform 1 PSMA4 1.000 proteasome alpha 4 subunit isoform 1 PSMA8 0.258 proteasome alpha 8 subunit isoform 3 PSMA8 0.258 proteasome alpha 8 subunit isoform 2 PSMA8 0.252 proteasome alpha 8 subunit isoform 1 PSMA7 0.244 proteasome alpha 7 subunit PSMA2 0.229 proteasome subunit alpha type 2 PSMA6 0.170 proteasome alpha 6 subunit PSMA5 0.153 proteasome alpha 5 subunit PSMA1 0.125 proteasome alpha 1 subunit isoform 2 PSMA1 0.125 proteasome alpha 1 subunit isoform 1 PSMA3 0.108 proteasome alpha 3 subunit isoform 1 PSMA3 0.093 proteasome alpha 3 subunit isoform 2 PSMB10 0.048 proteasome beta 10 subunit proprotein BAT2D1 0.042 HBxAg transactivated protein 2 LOC100133698 0.040 PREDICTED: hypothetical protein SCAPER 0.034 S-phase cyclin A-associated protein in the ER isofo... C14orf38 0.034 PREDICTED: hypothetical protein C14orf38 0.034 PREDICTED: hypothetical protein C14orf38 0.034 PREDICTED: hypothetical protein SCAPER 0.034 S-phase cyclin A-associated protein in the ER isofo... UPF2 0.034 UPF2 regulator of nonsense transcripts homolog [Homo... UPF2 0.034 UPF2 regulator of nonsense transcripts homolog [Homo... BAZ1A 0.034 bromodomain adjacent to zinc finger domain, 1A isofo... BAZ1A 0.034 bromodomain adjacent to zinc finger domain, 1A isofo... DNAJC2 0.031 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ... DNAJC2 0.031 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform... MAP1A 0.031 microtubule-associated protein 1A IQCA1 0.031 IQ motif containing with AAA domain 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.