Guide to the Human Genome
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Name: PLA2G2A Sequence: fasta or formatted (144aa) NCBI GI: 4505849
Description:

phospholipase A2, group IIA precursor

Referenced in:

Lipid Metabolism

Other entries for this name:
alt mRNA [144aa] phospholipase A2, group IIA precursor
alt mRNA [144aa] phospholipase A2, group IIA precursor
alt mRNA [144aa] phospholipase A2, group IIA precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         10           3
 C cysteine            9.7         14           2
 D aspartate           3.5          5           1
 E glutamate           2.1          3           1
 F phenylalanine       4.2          6           1
 G glycine             9.0         13           2
 H histidine           3.5          5           1
 I isoleucine          2.8          4           1
 K lysine              9.7         14           2
 L leucine             8.3         12           4
 M methionine          2.1          3           1
 N asparagine          4.2          6           1
 P proline             1.4          2           1
 Q glutamine           2.8          4           1
 R arginine            6.9         10           1
 S serine              6.9         10           1
 T threonine           7.6         11           2
 V valine              2.8          4           1
 W tryptophan          0.0          0           0
 Y tyrosine            5.6          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2, group IIA precursor 
PLA2G2A               1.000   phospholipase A2, group IIA precursor 
PLA2G2A               1.000   phospholipase A2, group IIA precursor 
PLA2G2A               1.000   phospholipase A2, group IIA precursor 
PLA2G2D               0.448   phospholipase A2, group IID 
PLA2G2E               0.417   phospholipase A2, group IIE 
PLA2G5                0.378   phospholipase A2, group V precursor 
PLA2G2F               0.326   phospholipase A2, group IIF 
PLA2G10               0.274   phospholipase A2, group X 
PLA2G1B               0.247   phospholipase A2 group IB 
PLA2G2C               0.191   phospholipase A2, group IIC 
OC90                  0.170   otoconin 90 
LOC100290505          0.052   PREDICTED: hypothetical protein XP_002347705 
LOC100289399          0.042   PREDICTED: hypothetical protein XP_002344154 
FBLN1                 0.017   fibulin 1 isoform B precursor 
FBLN1                 0.017   fibulin 1 isoform A precursor 
FBLN1                 0.017   fibulin 1 isoform D 
FBLN1                 0.017   fibulin 1 isoform C precursor 
KRTAP6-3              0.017   keratin associated protein 6-3 
NOTCH1                0.017   notch1 preproprotein 
KRTAP5-1              0.017   keratin associated protein 5-1 
KRTAP5-7              0.014   keratin associated protein 5-7 
KRTAP5-11             0.014   keratin associated protein 5-11 
LOC729815             0.014   PREDICTED: hypothetical protein 
LOC729815             0.014   PREDICTED: hypothetical protein 
FBN3                  0.010   fibrillin 3 precursor 
KRTAP5-8              0.010   keratin associated protein 5-8 
WNT3A                 0.010   wingless-type MMTV integration site family, member 3...
STAB2                 0.010   stabilin 2 precursor 
KRTAP5-4              0.010   keratin associated protein 5-4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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