Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PLA2G2E Sequence: fasta or formatted (142aa) NCBI GI: 7657461
Description:

phospholipase A2, group IIE

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9          7           2
 C cysteine           10.6         15           2
 D aspartate           3.5          5           1
 E glutamate           4.2          6           1
 F phenylalanine       3.5          5           1
 G glycine             9.2         13           2
 H histidine           3.5          5           1
 I isoleucine          2.1          3           1
 K lysine              6.3          9           1
 L leucine            10.6         15           2
 M methionine          2.1          3           1
 N asparagine          3.5          5           1
 P proline             4.9          7           2
 Q glutamine           2.8          4           1
 R arginine            5.6          8           2
 S serine              3.5          5           1
 T threonine           6.3          9           2
 V valine              5.6          8           1
 W tryptophan          1.4          2           1
 Y tyrosine            5.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2, group IIE 
PLA2G2A               0.408   phospholipase A2, group IIA precursor 
PLA2G2A               0.408   phospholipase A2, group IIA precursor 
PLA2G2A               0.408   phospholipase A2, group IIA precursor 
PLA2G2A               0.408   phospholipase A2, group IIA precursor 
PLA2G5                0.344   phospholipase A2, group V precursor 
PLA2G2D               0.327   phospholipase A2, group IID 
PLA2G2F               0.323   phospholipase A2, group IIF 
PLA2G10               0.303   phospholipase A2, group X 
PLA2G1B               0.214   phospholipase A2 group IB 
PLA2G2C               0.184   phospholipase A2, group IIC 
OC90                  0.160   otoconin 90 
LOC100290505          0.088   PREDICTED: hypothetical protein XP_002347705 
LOC100289399          0.082   PREDICTED: hypothetical protein XP_002344154 
ITGB8                 0.024   integrin, beta 8 precursor 
MRPL22                0.014   mitochondrial ribosomal protein L22 isoform b 
MRPL22                0.014   mitochondrial ribosomal protein L22 isoform a 
ADD2                  0.014   adducin 2 isoform e 
ADD2                  0.014   adducin 2 isoform b 
ADD2                  0.014   adducin 2 isoform a 
CCDC129               0.014   coiled-coil domain containing 129 
HEG1                  0.010   HEG homolog 1 
ITGB7                 0.007   integrin, beta 7 
RELN                  0.007   reelin isoform b 
RELN                  0.007   reelin isoform a 
POTEG                 0.007   POTE ankyrin domain family, member G 
P704P                 0.007   prostate-specific P704P 
POTEB                 0.007   protein expressed in prostate, ovary, testis, and pl...
POTEE                 0.007   protein expressed in prostate, ovary, testis, and p...
POTED                 0.007   pote protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press