Guide to the Human Genome
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Name: PLA2G2C Sequence: fasta or formatted (150aa) NCBI GI: 157743243
Description:

phospholipase A2, group IIC

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7          7           2
 C cysteine            8.0         12           1
 D aspartate           3.3          5           2
 E glutamate           3.3          5           1
 F phenylalanine       8.7         13           2
 G glycine             7.3         11           1
 H histidine           4.0          6           1
 I isoleucine          2.7          4           1
 K lysine              6.7         10           1
 L leucine             5.3          8           1
 M methionine          0.7          1           1
 N asparagine          2.0          3           1
 P proline             6.7         10           1
 Q glutamine           4.7          7           1
 R arginine            4.0          6           2
 S serine             12.0         18           2
 T threonine           4.0          6           1
 V valine              6.0          9           2
 W tryptophan          1.3          2           1
 Y tyrosine            4.7          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2, group IIC 
PLA2G2D               0.180   phospholipase A2, group IID 
PLA2G2A               0.180   phospholipase A2, group IIA precursor 
PLA2G2A               0.180   phospholipase A2, group IIA precursor 
PLA2G2A               0.180   phospholipase A2, group IIA precursor 
PLA2G2A               0.180   phospholipase A2, group IIA precursor 
PLA2G2E               0.176   phospholipase A2, group IIE 
PLA2G2F               0.167   phospholipase A2, group IIF 
PLA2G5                0.167   phospholipase A2, group V precursor 
PLA2G1B               0.141   phospholipase A2 group IB 
PLA2G10               0.105   phospholipase A2, group X 
OC90                  0.056   otoconin 90 
HS6ST1                0.029   heparan sulfate 6-O-sulfotransferase 1 
RPAIN                 0.023   RPA interacting protein isoform a 
KIAA0892              0.023   hypothetical protein LOC23383 
CACNA1H               0.020   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1H               0.020   calcium channel, voltage-dependent, T type, alpha 1H...
LAMB2                 0.016   laminin, beta 2 precursor 
MUC12                 0.013   PREDICTED: mucin 12 
MUC12                 0.013   PREDICTED: mucin 12 
MUC12                 0.013   PREDICTED: mucin 12 
MUC12                 0.013   PREDICTED: mucin 12, cell surface associated 
RPAIN                 0.013   RPA interacting protein isoform b 
SSPO                  0.013   SCO-spondin 
NBEAL1                0.010   neurobeachin-like 1 isoform 3 
NBEAL1                0.010   neurobeachin-like 1 isoform 2 
NBEAL1                0.010   neurobeachin-like 1 isoform 1 
FBN3                  0.010   fibrillin 3 precursor 
CRB1                  0.010   crumbs homolog 1 precursor 
TEK                   0.010   TEK tyrosine kinase, endothelial precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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