Guide to the Human Genome
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Name: PLA2G2F Sequence: fasta or formatted (211aa) NCBI GI: 145553989
Description:

phospholipase A2, group IIF

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         13           1
 C cysteine            8.1         17           2
 D aspartate           5.2         11           1
 E glutamate           5.2         11           2
 F phenylalanine       3.8          8           2
 G glycine             8.5         18           2
 H histidine           3.3          7           1
 I isoleucine          2.4          5           1
 K lysine              5.7         12           3
 L leucine             6.6         14           2
 M methionine          2.8          6           1
 N asparagine          4.3          9           2
 P proline             7.1         15           3
 Q glutamine           3.3          7           1
 R arginine            4.3          9           1
 S serine              7.1         15           2
 T threonine           5.2         11           1
 V valine              5.7         12           1
 W tryptophan          0.9          2           1
 Y tyrosine            4.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2, group IIF 
PLA2G2D               0.256   phospholipase A2, group IID 
PLA2G2E               0.217   phospholipase A2, group IIE 
PLA2G2A               0.215   phospholipase A2, group IIA precursor 
PLA2G2A               0.215   phospholipase A2, group IIA precursor 
PLA2G2A               0.215   phospholipase A2, group IIA precursor 
PLA2G2A               0.215   phospholipase A2, group IIA precursor 
PLA2G5                0.189   phospholipase A2, group V precursor 
PLA2G10               0.185   phospholipase A2, group X 
PLA2G1B               0.135   phospholipase A2 group IB 
PLA2G2C               0.116   phospholipase A2, group IIC 
OC90                  0.100   otoconin 90 
LOC100290505          0.034   PREDICTED: hypothetical protein XP_002347705 
LOC100289399          0.032   PREDICTED: hypothetical protein XP_002344154 
KLHL31                0.018   kelch repeat and BTB (POZ) domain containing 1 [Homo...
NOTCH1                0.016   notch1 preproprotein 
CD248                 0.016   tumor endothelial marker 1 precursor 
ANTXR1                0.014   anthrax toxin receptor 1 isoform 1 precursor 
FMN1                  0.011   formin 1 
CDC42BPA              0.011   CDC42-binding protein kinase alpha isoform B 
CDC42BPA              0.011   CDC42-binding protein kinase alpha isoform A 
KCNJ4                 0.009   potassium inwardly-rectifying channel J4 
KCNJ4                 0.009   potassium inwardly-rectifying channel J4 
SPEN                  0.009   spen homolog, transcriptional regulator 
FMNL3                 0.009   formin-like 3 isoform 2 
FMNL3                 0.009   formin-like 3 isoform 1 
ABI1                  0.007   abl-interactor 1 isoform c 
PLA2G3                0.007   phospholipase A2, group III precursor 
TINAGL1               0.007   tubulointerstitial nephritis antigen-like 1 
WASL                  0.007   Wiskott-Aldrich syndrome gene-like protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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