Guide to the Human Genome
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Name: PLA2G5 Sequence: fasta or formatted (138aa) NCBI GI: 4505853
Description:

phospholipase A2, group V precursor

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1          7           1
 C cysteine            9.4         13           2
 D aspartate           3.6          5           1
 E glutamate           2.9          4           2
 F phenylalanine       3.6          5           1
 G glycine            10.9         15           2
 H histidine           2.2          3           1
 I isoleucine          2.2          3           1
 K lysine              6.5          9           1
 L leucine            10.1         14           2
 M methionine          1.4          2           1
 N asparagine          5.1          7           1
 P proline             5.1          7           1
 Q glutamine           2.9          4           1
 R arginine            5.1          7           1
 S serine              3.6          5           1
 T threonine           4.3          6           1
 V valine              5.1          7           2
 W tryptophan          3.6          5           1
 Y tyrosine            7.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2, group V precursor 
PLA2G2D               0.380   phospholipase A2, group IID 
PLA2G2A               0.373   phospholipase A2, group IIA precursor 
PLA2G2A               0.373   phospholipase A2, group IIA precursor 
PLA2G2A               0.373   phospholipase A2, group IIA precursor 
PLA2G2A               0.373   phospholipase A2, group IIA precursor 
PLA2G2E               0.346   phospholipase A2, group IIE 
PLA2G2F               0.284   phospholipase A2, group IIF 
PLA2G10               0.250   phospholipase A2, group X 
PLA2G2C               0.175   phospholipase A2, group IIC 
PLA2G1B               0.161   phospholipase A2 group IB 
OC90                  0.116   otoconin 90 
LOC100290505          0.045   PREDICTED: hypothetical protein XP_002347705 
LOC100289399          0.034   PREDICTED: hypothetical protein XP_002344154 
FBN3                  0.017   fibrillin 3 precursor 
PEAR1                 0.017   platelet endothelial aggregation receptor 1 
SETMAR                0.017   SET domain and mariner transposase fusion 
FLRT2                 0.010   fibronectin leucine rich transmembrane protein 2 [Hom...
MEGF8                 0.010   multiple EGF-like-domains 8 
PLA2G3                0.010   phospholipase A2, group III precursor 
C17orf56              0.010   hypothetical protein LOC146705 
C9orf125              0.007   hypothetical protein LOC84302 
C9orf163              0.007   hypothetical protein LOC158055 
MRPS34                0.007   mitochondrial ribosomal protein S34 
BMPR1A                0.003   bone morphogenetic protein receptor, type IA precurs...
LRP1B                 0.003   low density lipoprotein-related protein 1B precursor...
PLEKHG1               0.003   pleckstrin homology domain containing, family G (wit...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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