Guide to the Human Genome
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Name: FBLN1 Sequence: fasta or formatted (703aa) NCBI GI: 34734066
Description:

fibulin 1 isoform D

Referenced in:

Extracellular Matrix

Other entries for this name:
alt prot [683aa] fibulin 1 isoform C precursor
alt prot [601aa] fibulin 1 isoform B precursor
alt prot [566aa] fibulin 1 isoform A precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         33           2
 C cysteine           10.2         72           2
 D aspartate           5.8         41           1
 E glutamate           7.1         50           3
 F phenylalanine       3.3         23           1
 G glycine             8.5         60           3
 H histidine           2.8         20           1
 I isoleucine          5.3         37           2
 K lysine              2.4         17           1
 L leucine             6.4         45           4
 M methionine          1.1          8           1
 N asparagine          4.6         32           1
 P proline             4.6         32           2
 Q glutamine           4.6         32           2
 R arginine            6.3         44           2
 S serine              7.5         53           3
 T threonine           4.8         34           1
 V valine              6.7         47           2
 W tryptophan          0.1          1           1
 Y tyrosine            3.1         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibulin 1 isoform D 
FBLN1                 0.817   fibulin 1 isoform C precursor 
FBLN1                 0.814   fibulin 1 isoform B precursor 
FBLN1                 0.812   fibulin 1 isoform A precursor 
FBLN2                 0.345   fibulin 2 isoform b precursor 
FBLN2                 0.330   fibulin 2 isoform a precursor 
HMCN1                 0.177   hemicentin 1 
LTBP1                 0.155   latent transforming growth factor beta binding prote...
LTBP1                 0.155   latent transforming growth factor beta binding prote...
FBN1                  0.153   fibrillin 1 precursor 
FBN3                  0.152   fibrillin 3 precursor 
FBLN5                 0.149   fibulin 5 precursor 
EFEMP2                0.147   EGF-containing fibulin-like extracellular matrix pr...
LTBP4                 0.144   latent transforming growth factor beta binding prot...
LTBP4                 0.144   latent transforming growth factor beta binding prot...
LTBP4                 0.144   latent transforming growth factor beta binding prot...
FBN2                  0.140   fibrillin 2 precursor 
LTBP2                 0.136   latent transforming growth factor beta binding protei...
MEGF6                 0.128   EGF-like-domain, multiple 3 
EFEMP1                0.123   EGF-containing fibulin-like extracellular matrix pro...
EFEMP1                0.123   EGF-containing fibulin-like extracellular matrix pro...
EFEMP1                0.123   EGF-containing fibulin-like extracellular matrix prot...
MATN2                 0.122   matrilin 2 isoform b precursor 
MATN2                 0.122   matrilin 2 isoform a precursor 
HMCN2                 0.120   PREDICTED: hemicentin 2 
HMCN2                 0.120   PREDICTED: hemicentin 2 
HMCN2                 0.120   PREDICTED: hemicentin 2 
LTBP3                 0.118   latent transforming growth factor beta binding prot...
LTBP3                 0.118   latent transforming growth factor beta binding prote...
SCUBE3                0.116   signal peptide, CUB domain, EGF-like 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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