Guide to the Human Genome
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Name: PLA2G10 Sequence: fasta or formatted (165aa) NCBI GI: 4505845
Description:

phospholipase A2, group X

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5          9           1
 C cysteine           10.3         17           2
 D aspartate           3.6          6           1
 E glutamate           6.1         10           2
 F phenylalanine       1.8          3           1
 G glycine             9.7         16           2
 H histidine           2.4          4           1
 I isoleucine          3.6          6           1
 K lysine              3.6          6           1
 L leucine            15.2         25           7
 M methionine          1.8          3           1
 N asparagine          2.4          4           1
 P proline             8.5         14           1
 Q glutamine           4.2          7           1
 R arginine            4.8          8           2
 S serine              4.2          7           1
 T threonine           3.0          5           1
 V valine              3.6          6           1
 W tryptophan          1.2          2           1
 Y tyrosine            4.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2, group X 
PLA2G2E               0.263   phospholipase A2, group IIE 
PLA2G2F               0.239   phospholipase A2, group IIF 
PLA2G2D               0.236   phospholipase A2, group IID 
PLA2G2A               0.233   phospholipase A2, group IIA precursor 
PLA2G2A               0.233   phospholipase A2, group IIA precursor 
PLA2G2A               0.233   phospholipase A2, group IIA precursor 
PLA2G2A               0.233   phospholipase A2, group IIA precursor 
PLA2G5                0.215   phospholipase A2, group V precursor 
LOC100290505          0.186   PREDICTED: hypothetical protein XP_002347705 
PLA2G1B               0.186   phospholipase A2 group IB 
OC90                  0.183   otoconin 90 
LOC100289399          0.180   PREDICTED: hypothetical protein XP_002344154 
PLA2G2C               0.094   phospholipase A2, group IIC 
LRP8                  0.024   low density lipoprotein receptor-related protein 8 i...
LRP8                  0.024   low density lipoprotein receptor-related protein 8 i...
DPF1                  0.024   D4, zinc and double PHD fingers family 1 isoform c ...
DPF1                  0.024   D4, zinc and double PHD fingers family 1 isoform a ...
SCUBE2                0.021   CEGP1 protein 
STAB1                 0.021   stabilin 1 precursor 
CORIN                 0.021   corin 
LOC100291220          0.021   PREDICTED: hypothetical protein XP_002347633 
LOC100287224          0.021   PREDICTED: hypothetical protein XP_002343483 
THSD7A                0.021   thrombospondin, type I, domain containing 7A 
LRP2                  0.021   low density lipoprotein-related protein 2 
LDLR                  0.018   low density lipoprotein receptor precursor 
LRP1                  0.018   low density lipoprotein-related protein 1 
LRP8                  0.018   low density lipoprotein receptor-related protein 8 i...
LRP8                  0.018   low density lipoprotein receptor-related protein 8 i...
ITGBL1                0.018   integrin, beta-like 1 (with EGF-like repeat domains) ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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