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Search of human proteins with 4505845
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505845 phospholipase A2, group X [Homo sapiens]
(165 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505845 phospholipase A2, group X [Homo sapiens] 364 e-101
gi|7657461 phospholipase A2, group IIE [Homo sapiens] 114 5e-26
gi|145553989 phospholipase A2, group IIF [Homo sapiens] 106 1e-23
gi|6912596 phospholipase A2, group IID [Homo sapiens] 105 1e-23
gi|239915991 phospholipase A2, group IIA precursor [Homo sapiens] 104 3e-23
gi|239915987 phospholipase A2, group IIA precursor [Homo sapiens] 104 3e-23
gi|239915985 phospholipase A2, group IIA precursor [Homo sapiens] 104 3e-23
gi|4505849 phospholipase A2, group IIA precursor [Homo sapiens] 104 3e-23
gi|4505853 phospholipase A2, group V precursor [Homo sapiens] 98 3e-21
gi|239751105 PREDICTED: hypothetical protein XP_002347705 [Homo ... 88 3e-18
gi|4505847 phospholipase A2 group IB [Homo sapiens] 88 3e-18
gi|223029412 otoconin 90 [Homo sapiens] 87 5e-18
gi|239745592 PREDICTED: hypothetical protein XP_002344154 [Homo ... 86 2e-17
gi|157743243 phospholipase A2, group IIC [Homo sapiens] 57 9e-09
gi|61744471 low density lipoprotein receptor-related protein 8 i... 33 0.15
gi|65301119 low density lipoprotein receptor-related protein 8 i... 33 0.15
gi|205830434 D4, zinc and double PHD fingers family 1 isoform c ... 33 0.15
gi|205830430 D4, zinc and double PHD fingers family 1 isoform a ... 33 0.15
gi|10190748 CEGP1 protein [Homo sapiens] 32 0.19
gi|61743978 stabilin 1 precursor [Homo sapiens] 32 0.19
gi|29244926 corin [Homo sapiens] 32 0.19
gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo ... 32 0.25
gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo ... 32 0.25
gi|150170672 thrombospondin, type I, domain containing 7A [Homo ... 32 0.33
gi|126012573 low density lipoprotein-related protein 2 [Homo sap... 32 0.33
gi|4504975 low density lipoprotein receptor precursor [Homo sapi... 31 0.56
gi|126012562 low density lipoprotein-related protein 1 [Homo sap... 31 0.56
gi|61744467 low density lipoprotein receptor-related protein 8 i... 31 0.56
gi|66082554 low density lipoprotein receptor-related protein 8 i... 31 0.56
gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains) ... 31 0.56
>gi|4505845 phospholipase A2, group X [Homo sapiens]
Length = 165
Score = 364 bits (935), Expect = e-101
Identities = 165/165 (100%), Positives = 165/165 (100%)
Query: 1 MGPLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPI 60
MGPLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPI
Sbjct: 1 MGPLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPI 60
Query: 61 AYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGP 120
AYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGP
Sbjct: 61 AYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGP 120
Query: 121 AENKCQELLCKCDQEIANCLAQTEYNLKYLFYPQFLCEPDSPKCD 165
AENKCQELLCKCDQEIANCLAQTEYNLKYLFYPQFLCEPDSPKCD
Sbjct: 121 AENKCQELLCKCDQEIANCLAQTEYNLKYLFYPQFLCEPDSPKCD 165
>gi|7657461 phospholipase A2, group IIE [Homo sapiens]
Length = 142
Score = 114 bits (284), Expect = 5e-26
Identities = 47/110 (42%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 57 RTPIAYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSV 116
++ + Y YGC+CG+GG P D DWCCH HDCCY R E+ GC PK E+Y + + +
Sbjct: 34 KSALQYNDYGCYCGIGGSHWPVDQTDWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGI 93
Query: 117 LCGPAENKCQELLCKCDQEIANCLAQT--EYNLKYLFYPQFLCEPDSPKC 164
C CQ L C+CD+ A C + YN KY YP LC +P C
Sbjct: 94 FCA-GRTTCQRLTCECDKRAALCFRRNLGTYNRKYAHYPNKLCTGPTPPC 142
>gi|145553989 phospholipase A2, group IIF [Homo sapiens]
Length = 211
Score = 106 bits (264), Expect = 1e-23
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Query: 33 ASRILRVHRRGILELAGTVGCVGPRTPI-AYMKYGCFCGLGGHGQPRDAIDWCCHGHDCC 91
A +L +L L V V R+ I +++ YGC+CGLGG GQP+D +DWCCH HDCC
Sbjct: 54 AGSVLSTAHGSLLNLKAMVEAVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCC 113
Query: 92 YTRAEEAGCSPKTERYSWQCVNQS-VLCGPA-ENKCQELLCKCDQEIANCLAQTEYNLKY 149
Y + GC P + Y N + ++C + +C + C CD+ + CL Y +Y
Sbjct: 114 YQELFDQGCHPYVDHYDHTIENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQTYREEY 173
Query: 150 LFYPQFLCEPDSPKC 164
+ C+ +P C
Sbjct: 174 RGFLNVYCQGPTPNC 188
>gi|6912596 phospholipase A2, group IID [Homo sapiens]
Length = 145
Score = 105 bits (263), Expect = 1e-23
Identities = 51/125 (40%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 43 GILELAGTVGCVGPRTPI-AYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCS 101
GIL L V V + PI +Y YGC CGLGG GQP+DA DWCC HDCCY + GCS
Sbjct: 21 GILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDATDWCCQTHDCCYDHLKTQGCS 80
Query: 102 PKTERYSWQCVNQSVLCGPAENKCQELLCKCDQEIANCLAQT--EYNLKYLFYPQFLCEP 159
+ Y + ++ C + C++ LC CD+E+A CL + Y + FY + C
Sbjct: 81 IYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCLKRNLDTYQKRLRFYWRPHCRG 140
Query: 160 DSPKC 164
+P C
Sbjct: 141 QTPGC 145
>gi|239915991 phospholipase A2, group IIA precursor [Homo sapiens]
Length = 144
Score = 104 bits (260), Expect = 3e-23
Identities = 55/154 (35%), Positives = 80/154 (51%), Gaps = 15/154 (9%)
Query: 13 LLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPIAYMKYGCFCGLG 72
LLLL +++ LL G+ ++ HR +++L G ++Y YGC CG+G
Sbjct: 4 LLLLAVIMIFGLLQAHGN-----LVNFHR--MIKLT-----TGKEAALSYGFYGCHCGVG 51
Query: 73 GHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGPAENKCQELLCKC 132
G G P+DA D CC HDCCY R E+ GC K Y + + C ++ C+ LC+C
Sbjct: 52 GRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCA-KQDSCRSQLCEC 110
Query: 133 DQEIANCLA--QTEYNLKYLFYPQFLCEPDSPKC 164
D+ A C A +T YN KY +Y C +P+C
Sbjct: 111 DKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC 144
>gi|239915987 phospholipase A2, group IIA precursor [Homo sapiens]
Length = 144
Score = 104 bits (260), Expect = 3e-23
Identities = 55/154 (35%), Positives = 80/154 (51%), Gaps = 15/154 (9%)
Query: 13 LLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPIAYMKYGCFCGLG 72
LLLL +++ LL G+ ++ HR +++L G ++Y YGC CG+G
Sbjct: 4 LLLLAVIMIFGLLQAHGN-----LVNFHR--MIKLT-----TGKEAALSYGFYGCHCGVG 51
Query: 73 GHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGPAENKCQELLCKC 132
G G P+DA D CC HDCCY R E+ GC K Y + + C ++ C+ LC+C
Sbjct: 52 GRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCA-KQDSCRSQLCEC 110
Query: 133 DQEIANCLA--QTEYNLKYLFYPQFLCEPDSPKC 164
D+ A C A +T YN KY +Y C +P+C
Sbjct: 111 DKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC 144
>gi|239915985 phospholipase A2, group IIA precursor [Homo sapiens]
Length = 144
Score = 104 bits (260), Expect = 3e-23
Identities = 55/154 (35%), Positives = 80/154 (51%), Gaps = 15/154 (9%)
Query: 13 LLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPIAYMKYGCFCGLG 72
LLLL +++ LL G+ ++ HR +++L G ++Y YGC CG+G
Sbjct: 4 LLLLAVIMIFGLLQAHGN-----LVNFHR--MIKLT-----TGKEAALSYGFYGCHCGVG 51
Query: 73 GHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGPAENKCQELLCKC 132
G G P+DA D CC HDCCY R E+ GC K Y + + C ++ C+ LC+C
Sbjct: 52 GRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCA-KQDSCRSQLCEC 110
Query: 133 DQEIANCLA--QTEYNLKYLFYPQFLCEPDSPKC 164
D+ A C A +T YN KY +Y C +P+C
Sbjct: 111 DKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC 144
>gi|4505849 phospholipase A2, group IIA precursor [Homo sapiens]
Length = 144
Score = 104 bits (260), Expect = 3e-23
Identities = 55/154 (35%), Positives = 80/154 (51%), Gaps = 15/154 (9%)
Query: 13 LLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPIAYMKYGCFCGLG 72
LLLL +++ LL G+ ++ HR +++L G ++Y YGC CG+G
Sbjct: 4 LLLLAVIMIFGLLQAHGN-----LVNFHR--MIKLT-----TGKEAALSYGFYGCHCGVG 51
Query: 73 GHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGPAENKCQELLCKC 132
G G P+DA D CC HDCCY R E+ GC K Y + + C ++ C+ LC+C
Sbjct: 52 GRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCA-KQDSCRSQLCEC 110
Query: 133 DQEIANCLA--QTEYNLKYLFYPQFLCEPDSPKC 164
D+ A C A +T YN KY +Y C +P+C
Sbjct: 111 DKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC 144
>gi|4505853 phospholipase A2, group V precursor [Homo sapiens]
Length = 138
Score = 98.2 bits (243), Expect = 3e-21
Identities = 46/118 (38%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 43 GILELAGTVGCVGPRTPIA-YMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCS 101
G+L+L + V + + Y YGC+CG GG G P+D DWCC HD CY R EE GC+
Sbjct: 21 GLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCN 80
Query: 102 PKTERYSWQCVNQSVLCGPAENKCQELLCKCDQEIANCLAQT--EYNLKYLFYPQFLC 157
+T+ Y ++ V C P C LC CD+++ CL + YN +Y ++P LC
Sbjct: 81 IRTQSYKYRFAWGVVTCEPGP-FCHVNLCACDRKLVYCLKRNLRSYNPQYQYFPNILC 137
>gi|239751105 PREDICTED: hypothetical protein XP_002347705 [Homo
sapiens]
Length = 138
Score = 88.2 bits (217), Expect = 3e-18
Identities = 35/35 (100%), Positives = 35/35 (100%)
Query: 84 CCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLC 118
CCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLC
Sbjct: 37 CCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLC 71
>gi|4505847 phospholipase A2 group IB [Homo sapiens]
Length = 148
Score = 88.2 bits (217), Expect = 3e-18
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 19 LLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTP--IAYMKYGCFCGLGGHGQ 76
L +LL + SG + R + + + CV P + + Y YGC+CGLGG G
Sbjct: 6 LAVLLTVAAADSG-------ISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGT 58
Query: 77 PRDAIDWCCHGHDCCYTRAEEAGC------SPKTERYSWQCVNQSVLCGPAENKCQELLC 130
P D +D CC HD CY +A++ +P T YS+ C ++ C +C+ +C
Sbjct: 59 PVDELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFIC 118
Query: 131 KCDQEIANCLAQTEYN 146
CD+ A C ++ YN
Sbjct: 119 NCDRNAAICFSKAPYN 134
>gi|223029412 otoconin 90 [Homo sapiens]
Length = 477
Score = 87.4 bits (215), Expect = 5e-18
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 13/121 (10%)
Query: 29 GSGEASRILRVHRRGILELAGTVGCVGPRTPIAYMKYGCFCGLGGHGQPRDAIDWCCHGH 88
GSG+ +++ +L + C+ R P + YGC+CG G G+PRD +D CC H
Sbjct: 297 GSGDNMQVMP-------QLGEMLFCLTSRCPEEFESYGCYCGQEGRGEPRDDLDRCCLSH 349
Query: 89 DCCYTRAEEAGCSPKTERYSWQ---CVNQSVLCGPAENKCQELLCKCDQEIANCLAQTEY 145
CC + GC ER W CV+ + CG ++ C++LLC CDQ A C+ +
Sbjct: 350 HCCLEQVRRLGC--LLERLPWSPVVCVDHTPKCG-GQSLCEKLLCACDQTAAECMTSASF 406
Query: 146 N 146
N
Sbjct: 407 N 407
Score = 70.5 bits (171), Expect = 6e-13
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 44 ILELAGTVGCVGPRTPIAYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPK 103
+++ + CV P + YGC C G P D D CC H CY A E C
Sbjct: 76 LIQFVNGMKCVAGLCPRDFEDYGCTCRFEMEGLPVDESDSCCFQHRRCYEEAAEMDCLQD 135
Query: 104 TERYSWQ--CVNQSVLCGPAENKCQELLCKCDQEIANCLAQTEYNLKYLFYPQFLCEPDS 161
+ S + CV++ ++C +N C+ LLC CD+ CLA++ N C +
Sbjct: 136 PAKLSTEVNCVSKKIICESKDN-CEHLLCTCDKAAIECLARSSLNSSLNLLDTSFCLAQT 194
Query: 162 PK 163
P+
Sbjct: 195 PE 196
>gi|239745592 PREDICTED: hypothetical protein XP_002344154 [Homo
sapiens]
Length = 138
Score = 85.5 bits (210), Expect = 2e-17
Identities = 34/35 (97%), Positives = 34/35 (97%)
Query: 84 CCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLC 118
CCHGHDCCYT AEEAGCSPKTERYSWQCVNQSVLC
Sbjct: 37 CCHGHDCCYTGAEEAGCSPKTERYSWQCVNQSVLC 71
>gi|157743243 phospholipase A2, group IIC [Homo sapiens]
Length = 150
Score = 56.6 bits (135), Expect = 9e-09
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 61 AYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCG- 119
+Y YGC+CGLG G P D D Y + +E C P Y + VN +V+CG
Sbjct: 41 SYYGYGCYCGLGDKGIPVDDTD--SPSSPSPYEKLKEFSCQPVLNSYQFHIVNGAVVCGC 98
Query: 120 ----PAENKCQELLCKCDQEIANCLAQT----EYNLKYLFYPQFLCEPDSPKC 164
A C+ C+CD++ +C ++ E N K F Q C P C
Sbjct: 99 TLGPGASCHCRLKACECDKQSVHCFKESLPTYEKNFKQ-FSSQPRCGRHKPWC 150
>gi|61744471 low density lipoprotein receptor-related protein 8
isoform 1 precursor [Homo sapiens]
Length = 963
Score = 32.7 bits (73), Expect = 0.15
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 83 WCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVL 117
W C G C A+EAGC+ + +QC N+S L
Sbjct: 146 WRCDGEKDCEGGADEAGCATLCAPHEFQCGNRSCL 180
Score = 30.8 bits (68), Expect = 0.56
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 83 WCCHGHDCCYTRAEE--AGCSPKTERYSWQCVNQSVLCGPAENKCQELLCKCDQE 135
W C G + C ++E A C+ + C + + CGP +KC +CD E
Sbjct: 103 WKCDGEEECPDGSDESEATCTKQV------CPAEKLSCGPTSHKCVPASWRCDGE 151
Score = 28.5 bits (62), Expect = 2.8
Identities = 38/164 (23%), Positives = 55/164 (33%), Gaps = 28/164 (17%)
Query: 3 PLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPIAY 62
P P L ++ LLLL LLLLL L + A +L G GP
Sbjct: 4 PEPGPLRLLALLLLLLLLLLLQLQHLAAAAADPLL--------------GGQGPAKDCEK 49
Query: 63 MKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGPAE 122
++ C + W C D C ++E C KT C + C
Sbjct: 50 DQFQC------RNERCIPSVWRCDEDDDCLDHSDEDDCPKKT------CADSDFTCDNGH 97
Query: 123 NKCQELLCKCDQEIANCLAQTEYNLKYLFYP--QFLCEPDSPKC 164
+ C ++E + ++E P + C P S KC
Sbjct: 98 CIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKC 141
>gi|65301119 low density lipoprotein receptor-related protein 8
isoform 4 precursor [Homo sapiens]
Length = 904
Score = 32.7 bits (73), Expect = 0.15
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 83 WCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVL 117
W C G C A+EAGC+ + +QC N+S L
Sbjct: 146 WRCDGEKDCEGGADEAGCATLCAPHEFQCGNRSCL 180
Score = 30.8 bits (68), Expect = 0.56
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 83 WCCHGHDCCYTRAEE--AGCSPKTERYSWQCVNQSVLCGPAENKCQELLCKCDQE 135
W C G + C ++E A C+ + C + + CGP +KC +CD E
Sbjct: 103 WKCDGEEECPDGSDESEATCTKQV------CPAEKLSCGPTSHKCVPASWRCDGE 151
Score = 28.5 bits (62), Expect = 2.8
Identities = 38/164 (23%), Positives = 55/164 (33%), Gaps = 28/164 (17%)
Query: 3 PLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPIAY 62
P P L ++ LLLL LLLLL L + A +L G GP
Sbjct: 4 PEPGPLRLLALLLLLLLLLLLQLQHLAAAAADPLL--------------GGQGPAKDCEK 49
Query: 63 MKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGPAE 122
++ C + W C D C ++E C KT C + C
Sbjct: 50 DQFQC------RNERCIPSVWRCDEDDDCLDHSDEDDCPKKT------CADSDFTCDNGH 97
Query: 123 NKCQELLCKCDQEIANCLAQTEYNLKYLFYP--QFLCEPDSPKC 164
+ C ++E + ++E P + C P S KC
Sbjct: 98 CIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKC 141
>gi|205830434 D4, zinc and double PHD fingers family 1 isoform c
[Homo sapiens]
Length = 332
Score = 32.7 bits (73), Expect = 0.15
Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 12/79 (15%)
Query: 65 YGCFCGLGGH---GQPRDAI---DWCCHGHDCCYTRAEEAGCSPKTERYSWQCVN--QSV 116
Y FC LGG G P D I D GH C + +T Y WQC+
Sbjct: 218 YCDFC-LGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRT--YRWQCIECKSCS 274
Query: 117 LCGPAENKCQELLC-KCDQ 134
LCG +EN Q L C CD+
Sbjct: 275 LCGTSENDDQLLFCDDCDR 293
>gi|205830430 D4, zinc and double PHD fingers family 1 isoform a
[Homo sapiens]
Length = 414
Score = 32.7 bits (73), Expect = 0.15
Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 12/79 (15%)
Query: 65 YGCFCGLGGH---GQPRDAI---DWCCHGHDCCYTRAEEAGCSPKTERYSWQCVN--QSV 116
Y FC LGG G P D I D GH C + +T Y WQC+
Sbjct: 300 YCDFC-LGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRT--YRWQCIECKSCS 356
Query: 117 LCGPAENKCQELLC-KCDQ 134
LCG +EN Q L C CD+
Sbjct: 357 LCGTSENDDQLLFCDDCDR 375
>gi|10190748 CEGP1 protein [Homo sapiens]
Length = 999
Score = 32.3 bits (72), Expect = 0.19
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 10 IMLLLLLPSLLLLLLLPGPGSGEAS---RILRVHRRGILELAGTVGCVGPRTPIAYMKYG 66
++LLLLLP LLLL PG G A+ + +G+ + C TP +Y K
Sbjct: 16 LLLLLLLPPLLLLAGAVPPGRGRAAGPQEDVDECAQGLDDCHADALC--QNTPTSY-KCS 72
Query: 67 CFCGLGGHGQPRDAIDWCCHG------HDC 90
C G G G+ + ID C + HDC
Sbjct: 73 CKPGYQGEGRQCEDIDECGNELNGGCVHDC 102
>gi|61743978 stabilin 1 precursor [Homo sapiens]
Length = 2570
Score = 32.3 bits (72), Expect = 0.19
Identities = 30/101 (29%), Positives = 36/101 (35%), Gaps = 20/101 (19%)
Query: 53 CVGPRTPIAYMKYG--CFCGLG--GHGQPRDAIDWCCHGHDCC--YTRAEEAG------C 100
C P P A + G C C LG G G+ D C GH C + + G C
Sbjct: 2060 CTPPCAPEAVCRAGNSCECSLGYEGDGRVCTVADLCQDGHGGCSEHANCSQVGTMVTCTC 2119
Query: 101 SPKTERYSWQCVNQSVLCGPAENKCQELLCKCDQEIANCLA 141
P E W C A N C + E ANCL+
Sbjct: 2120 LPDYEGDGWSC--------RARNPCTDGHRGGCSEHANCLS 2152
Score = 28.5 bits (62), Expect = 2.8
Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 13/74 (17%)
Query: 67 CFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGPAENKCQ 126
C G G+G +D C HGH C + A C+ K C Q G E
Sbjct: 1442 CAAGYSGNGIFCSEVDPCAHGHGGC---SPHANCT-KVAPGQRTCTCQDGYMGDGE---- 1493
Query: 127 ELLCKCDQEIANCL 140
LC QEI +CL
Sbjct: 1494 --LC---QEINSCL 1502
>gi|29244926 corin [Homo sapiens]
Length = 1042
Score = 32.3 bits (72), Expect = 0.19
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 12/73 (16%)
Query: 80 AIDWCCHGHDCCYTRAEEAGCSPKT----ERYSWQCVNQSVLC--------GPAENKCQE 127
A++W C G C +++E CS + E + QC+ + C G E C
Sbjct: 357 AMEWVCDGDHDCVDKSDEVNCSCHSQGLVECRNGQCIPSTFQCDGDEDCKDGSDEENCSV 416
Query: 128 LLCKCDQEIANCL 140
+ C + CL
Sbjct: 417 IQTSCQEGDQRCL 429
>gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo
sapiens]
Length = 261
Score = 32.0 bits (71), Expect = 0.25
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 3 PLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRG 43
P P+ LP+ML+L+LP+ L LP PGS R R R G
Sbjct: 161 PRPLPLPLMLMLMLPT---LQPLPPPGSARRPRRGRAGRGG 198
>gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo
sapiens]
Length = 261
Score = 32.0 bits (71), Expect = 0.25
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 3 PLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRG 43
P P+ LP+ML+L+LP+ L LP PGS R R R G
Sbjct: 161 PRPLPLPLMLMLMLPT---LQPLPPPGSARRPRRGRAGRGG 198
>gi|150170672 thrombospondin, type I, domain containing 7A [Homo
sapiens]
Length = 1657
Score = 31.6 bits (70), Expect = 0.33
Identities = 42/154 (27%), Positives = 56/154 (36%), Gaps = 41/154 (26%)
Query: 4 LPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPIAYM 63
LP+ LP LP LLLLLL PG G A + + C+G
Sbjct: 26 LPLPLP------LPLLLLLLLRPGAGRAAAQGEAEAPTLYLWKTGPWGRCMGDE------ 73
Query: 64 KYGCFCGLGGHGQPRDAIDWCCH--GHDCCYTRAEEAG-----------CSPKTERYSWQ 110
CG GG Q R WC H G +T ++A C E Y W+
Sbjct: 74 -----CGPGGI-QTRAV--WCAHVEGWTTLHTNCKQAERPNNQQNCFKVCDWHKELYDWR 125
Query: 111 CVNQSVLCGPAENKCQELLCKCDQEIANCLAQTE 144
GP N+CQ ++ K ++ C+ E
Sbjct: 126 -------LGP-WNQCQPVISKSLEKPLECIKGEE 151
>gi|126012573 low density lipoprotein-related protein 2 [Homo sapiens]
Length = 4655
Score = 31.6 bits (70), Expect = 0.33
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 83 WCCHGH-DCCYTRAEEAGCSPKTERYSW------QCVNQSVLCGPAENKCQEL 128
W C GH DC Y E C PKT S+ C++++ LC +N C ++
Sbjct: 1248 WECDGHPDCLYGSDEHNACVPKTCPSSYFHCDNGNCIHRAWLC-DRDNDCGDM 1299
Score = 30.0 bits (66), Expect = 0.95
Identities = 30/126 (23%), Positives = 45/126 (35%), Gaps = 17/126 (13%)
Query: 47 LAGTVGCVGPRTPIAYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTER 106
L V C+ P + CG GH P D W C G C A+E GC+ T +
Sbjct: 13 LLALVACLAPASGQECDSAHFRCG-SGHCIPAD---WRCDGTKDCSDDADEIGCAVVTCQ 68
Query: 107 YSW-------QCVNQSVLCGPAENKCQELLCKCDQEIANCLAQTEYNLKYLFYPQFLCEP 159
+ QC+ S +C Q+ C + +Q+ + + C P
Sbjct: 69 QGYFKCQSEGQCIPNSWVCD------QDQDCDDGSDERQDCSQSTCSSHQITCSNGQCIP 122
Query: 160 DSPKCD 165
+CD
Sbjct: 123 SEYRCD 128
Score = 29.6 bits (65), Expect = 1.2
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 83 WCCHGHDCCYTRAEEAGCSPK-TERYSWQCVNQSVLCGPAE------NKCQELLCKCDQE 135
W C G + C ++E C+P+ ++CVNQ C P+ N C + + D E
Sbjct: 3737 WQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQ--CIPSRWICDHYNDCGDNSDERDCE 3794
Query: 136 IANC 139
+ C
Sbjct: 3795 MRTC 3798
Score = 29.3 bits (64), Expect = 1.6
Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 15/71 (21%)
Query: 82 DWCCHGHDCCYTRAEEAGCSP------KTERYSWQCVNQSVLCGPAENKCQELLCKCDQE 135
+W C G D C +E GC K W C P +C + CD
Sbjct: 238 NWVCDGEDDCKDNGDEDGCESGPHDVHKCSPREWSC--------PESGRCISIYKVCD-G 288
Query: 136 IANCLAQTEYN 146
I +C + + N
Sbjct: 289 ILDCPGREDEN 299
Score = 28.1 bits (61), Expect = 3.6
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 18/92 (19%)
Query: 58 TPIAYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVL 117
TP +Y CG GH P D + C D C ++E GC+ ER
Sbjct: 3924 TPKPCTEYEYKCG-NGHCIPHDNV---CDDADDCGDWSDELGCNKGKERTC--------- 3970
Query: 118 CGPAENKCQELLCKCDQE--IANCLAQTEYNL 147
AEN C++ + ++ I +C A E N+
Sbjct: 3971 ---AENICEQNCTQLNEGGFICSCTAGFETNV 3999
>gi|4504975 low density lipoprotein receptor precursor [Homo
sapiens]
Length = 860
Score = 30.8 bits (68), Expect = 0.56
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 13/83 (15%)
Query: 83 WCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGPAENKCQELLCKCDQEIANCLAQ 142
W C G C ++E GC PKT C C + ++ +C D++ CL
Sbjct: 87 WRCDGQVDCDNGSDEQGCPPKT------CSQDEFRCHDGKCISRQFVCDSDRD---CLDG 137
Query: 143 TEYNLKYLFYPQFLCEPDSPKCD 165
++ P C P S +C+
Sbjct: 138 SD----EASCPVLTCGPASFQCN 156
>gi|126012562 low density lipoprotein-related protein 1 [Homo sapiens]
Length = 4544
Score = 30.8 bits (68), Expect = 0.56
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 83 WCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGPAENKCQ---ELLCKCDQEIANC 139
W C G C ++E C+P+ + +QC +S C P +C + + D+E
Sbjct: 3592 WKCDGDHDCADGSDEKDCTPRCDMDQFQC--KSGHCIPLRWRCDADADCMDGSDEEACGT 3649
Query: 140 LAQTEYNLKYLFYPQFLCEPDSPKCD 165
+T L LC+P + KCD
Sbjct: 3650 GVRT-CPLDEFQCNNTLCKPLAWKCD 3674
Score = 29.6 bits (65), Expect = 1.2
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 81 IDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGP------AENKCQELLCKCDQ 134
I+W C + C ++EAGCS ++C S C P +N C + D+
Sbjct: 992 INWRCDNDNDCGDNSDEAGCSHSCSSTQFKC--NSGRCIPEHWTCDGDNDCGDY---SDE 1046
Query: 135 EIANCLAQ 142
ANC Q
Sbjct: 1047 THANCTNQ 1054
Score = 28.5 bits (62), Expect = 2.8
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 74 HGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQC-VNQSVLCGPAENKCQELLC 130
+G+ + W C G + C+ +++EA +P +C + LC + LLC
Sbjct: 2867 NGRCLSSRQWECDGENDCHDQSDEAPKNPHCTSQEHKCNASSQFLCSSGRCVAEALLC 2924
>gi|61744467 low density lipoprotein receptor-related protein 8
isoform 3 precursor [Homo sapiens]
Length = 700
Score = 30.8 bits (68), Expect = 0.56
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 83 WCCHGHDCCYTRAEE--AGCSPKTERYSWQCVNQSVLCGPAENKCQELLCKCDQE 135
W C G + C ++E A C+ + C + + CGP +KC +CD E
Sbjct: 103 WKCDGEEECPDGSDESEATCTKQV------CPAEKLSCGPTSHKCVPASWRCDGE 151
Score = 28.5 bits (62), Expect = 2.8
Identities = 38/164 (23%), Positives = 55/164 (33%), Gaps = 28/164 (17%)
Query: 3 PLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPIAY 62
P P L ++ LLLL LLLLL L + A +L G GP
Sbjct: 4 PEPGPLRLLALLLLLLLLLLLQLQHLAAAAADPLL--------------GGQGPAKDCEK 49
Query: 63 MKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGPAE 122
++ C + W C D C ++E C KT C + C
Sbjct: 50 DQFQC------RNERCIPSVWRCDEDDDCLDHSDEDDCPKKT------CADSDFTCDNGH 97
Query: 123 NKCQELLCKCDQEIANCLAQTEYNLKYLFYP--QFLCEPDSPKC 164
+ C ++E + ++E P + C P S KC
Sbjct: 98 CIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKC 141
Score = 27.3 bits (59), Expect = 6.2
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 6/53 (11%)
Query: 83 WCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGPAENKCQELLCKCDQE 135
W C G C A+EAGC+ C CG + C + C+QE
Sbjct: 146 WRCDGEKDCEGGADEAGCATSL----GTCRGDEFQCG--DGTCVLAIKHCNQE 192
>gi|66082554 low density lipoprotein receptor-related protein 8
isoform 2 precursor [Homo sapiens]
Length = 793
Score = 30.8 bits (68), Expect = 0.56
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 83 WCCHGHDCCYTRAEE--AGCSPKTERYSWQCVNQSVLCGPAENKCQELLCKCDQE 135
W C G + C ++E A C+ + C + + CGP +KC +CD E
Sbjct: 103 WKCDGEEECPDGSDESEATCTKQV------CPAEKLSCGPTSHKCVPASWRCDGE 151
Score = 28.5 bits (62), Expect = 2.8
Identities = 38/164 (23%), Positives = 55/164 (33%), Gaps = 28/164 (17%)
Query: 3 PLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPIAY 62
P P L ++ LLLL LLLLL L + A +L G GP
Sbjct: 4 PEPGPLRLLALLLLLLLLLLLQLQHLAAAAADPLL--------------GGQGPAKDCEK 49
Query: 63 MKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGPAE 122
++ C + W C D C ++E C KT C + C
Sbjct: 50 DQFQC------RNERCIPSVWRCDEDDDCLDHSDEDDCPKKT------CADSDFTCDNGH 97
Query: 123 NKCQELLCKCDQEIANCLAQTEYNLKYLFYP--QFLCEPDSPKC 164
+ C ++E + ++E P + C P S KC
Sbjct: 98 CIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKC 141
>gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains)
[Homo sapiens]
Length = 494
Score = 30.8 bits (68), Expect = 0.56
Identities = 23/67 (34%), Positives = 24/67 (35%), Gaps = 9/67 (13%)
Query: 75 GQPRDAIDWCCHGH---DC--CYTRAEEAGC--SPKTERYSWQCVNQSVLCGPAENKCQE 127
GQP A CHG DC C E G P E + W C KC
Sbjct: 55 GQPPGAA--LCHGRGRCDCGVCICHVTEPGMFFGPLCECHEWVCETYDGSTCAGHGKCDC 112
Query: 128 LLCKCDQ 134
CKCDQ
Sbjct: 113 GKCKCDQ 119
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.144 0.503
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,136,869
Number of Sequences: 37866
Number of extensions: 399996
Number of successful extensions: 1560
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 1422
Number of HSP's gapped (non-prelim): 152
length of query: 165
length of database: 18,247,518
effective HSP length: 94
effective length of query: 71
effective length of database: 14,688,114
effective search space: 1042856094
effective search space used: 1042856094
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.