Guide to the Human Genome
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Name: THSD7A Sequence: fasta or formatted (1657aa) NCBI GI: 150170672
Description:

thrombospondin, type I, domain containing 7A

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         77           3
 C cysteine            8.0        133           1
 D aspartate           4.5         75           2
 E glutamate           7.0        116           2
 F phenylalanine       1.4         23           1
 G glycine             7.5        125           3
 H histidine           1.6         27           1
 I isoleucine          3.7         61           2
 K lysine              5.9         98           3
 L leucine             6.2        103           7
 M methionine          1.6         26           1
 N asparagine          3.9         64           2
 P proline             7.1        117           2
 Q glutamine           6.4        106           2
 R arginine            6.1        101           3
 S serine              7.5        125           2
 T threonine           5.4         89           4
 V valine              6.0        100           3
 W tryptophan          3.0         49           1
 Y tyrosine            2.5         42           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thrombospondin, type I, domain containing 7A 
THSD7B                0.487   thrombospondin, type I, domain containing 7B 
ADAMTS9               0.040   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS20              0.035   a disintegrin-like and metalloprotease with thrombo...
SSPO                  0.032   SCO-spondin 
SPON1                 0.029   spondin 1, extracellular matrix protein 
HMCN1                 0.025   hemicentin 1 
ADAMTSL4              0.021   thrombospondin repeat containing 1 isoform 1 
ADAMTSL2              0.021   ADAMTS-like 2 precursor 
ADAMTSL2              0.021   ADAMTS-like 2 precursor 
LOC653348             0.021   PREDICTED: similar to ADAMTS-like 2 
ADAMTSL1              0.021   ADAMTS-like 1 isoform 4 precursor 
SEMA5A                0.020   semaphorin 5A 
ADAMTSL3              0.020   ADAMTS-like 3 precursor 
CFP                   0.019   complement factor properdin precursor 
CFP                   0.019   complement factor properdin precursor 
BAI1                  0.018   brain-specific angiogenesis inhibitor 1 precursor [...
ADAMTS18              0.017   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS17              0.017   ADAM metallopeptidase with thrombospondin type 1 mo...
BAI3                  0.017   brain-specific angiogenesis inhibitor 3 
SEMA5B                0.017   semaphorin 5B isoform 1 
THSD4                 0.017   thrombospondin, type I, domain containing 4 
THBS1                 0.015   thrombospondin 1 precursor 
ADAMTS13              0.015   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.015   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.015   ADAM metallopeptidase with thrombospondin type 1 mot...
BAI2                  0.014   brain-specific angiogenesis inhibitor 2 
ADAMTS6               0.014   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS10              0.014   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS16              0.013   ADAM metallopeptidase with thrombospondin type 1 mo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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