LOC643677 15267

Name: LOC643677	Sequence: fasta or formatted (7081aa)		NCBI GI: 226246554
Description: hypothetical protein LOC643677		Referenced in: Protein Composition and Structure Additional Conserved Proteins
Other entries for this name: alt prot [6929aa] PREDICTED: hypothetical protein LOC643677 alt prot [6929aa] PREDICTED: hypothetical protein LOC643677 alt prot [6929aa] PREDICTED: hypothetical protein LOC643677
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.0 283 2 C cysteine 1.5 104 1 D aspartate 4.7 330 2 E glutamate 8.8 626 5 F phenylalanine 2.8 199 3 G glycine 4.4 315 2 H histidine 2.9 202 2 I isoleucine 5.7 403 3 K lysine 11.1 784 3 L leucine 8.6 611 3 M methionine 2.3 165 2 N asparagine 4.4 315 2 P proline 5.4 379 4 Q glutamine 6.1 434 3 R arginine 4.2 295 2 S serine 10.3 730 3 T threonine 5.9 417 2 V valine 4.5 320 2 W tryptophan 0.6 41 1 Y tyrosine 1.8 128 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC643677 LOC643677 0.610 PREDICTED: hypothetical protein LOC643677 LOC643677 0.609 PREDICTED: hypothetical protein LOC643677 LOC643677 0.609 PREDICTED: hypothetical protein LOC643677 RPGR 0.004 retinitis pigmentosa GTPase regulator isoform C [Hom... NEFM 0.003 neurofilament, medium polypeptide 150kDa isoform 1 ... LOC283685 0.003 PREDICTED: golgi autoantigen, golgin subfamily a-li... NEFH 0.003 neurofilament, heavy polypeptide 200kDa MYH3 0.003 myosin, heavy chain 3, skeletal muscle, embryonic [H... EIF5B 0.003 eukaryotic translation initiation factor 5B TRDN 0.003 triadin LOC283685 0.002 PREDICTED: golgi autoantigen, golgin subfamily a-li... CENPE 0.002 centromere protein E CALD1 0.002 caldesmon 1 isoform 1 NSBP1 0.002 nucleosomal binding protein 1 GOLGA4 0.002 golgi autoantigen, golgin subfamily a, 4 CENPF 0.002 centromere protein F LOC283767 0.002 golgi autoantigen, golgin subfamily a-like LOC645202 0.002 PREDICTED: hypothetical protein LOC645202 NEFM 0.002 neurofilament, medium polypeptide 150kDa isoform 2 ... RP1L1 0.002 retinitis pigmentosa 1-like 1 LOC727832 0.002 golgi autoantigen, golgin subfamily a-like LOC440243 0.002 PREDICTED: Putative golgin subfamily A member 6-lik... TCHH 0.002 trichohyalin CEP250 0.002 centrosomal protein 2 PPIG 0.002 peptidylprolyl isomerase G WDR87 0.002 NYD-SP11 protein CALD1 0.002 caldesmon 1 isoform 3 LOC400352 0.002 PREDICTED: similar to Putative golgin subfamily A m... CYLC2 0.002 cylicin 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.