Search of human proteins with 4505733

Search of human proteins with 4505733

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4505733 platelet factor 4 (chemokine (C-X-C motif) ligand 4)
[Homo sapiens]
         (101 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4505733 platelet factor 4 (chemokine (C-X-C motif) ligand 4) ...   201   1e-52
gi|4505735 platelet factor 4 variant 1 [Homo sapiens]                 163   2e-41
gi|4504153 chemokine (C-X-C motif) ligand 1 [Homo sapiens]             82   9e-17
gi|4505981 pro-platelet basic protein precursor [Homo sapiens]         80   3e-16
gi|4506849 chemokine (C-X-C motif) ligand 5 precursor [Homo sapi...    79   1e-15
gi|4504155 chemokine (C-X-C motif) ligand 2 [Homo sapiens]             75   9e-15
gi|4506851 chemokine (C-X-C motif) ligand 6 (granulocyte chemota...    75   1e-14
gi|54144650 chemokine (C-X-C motif) ligand 3 [Homo sapiens]            74   3e-14
gi|10834978 interleukin 8 precursor [Homo sapiens]                     58   2e-09
gi|221219042 pro-platelet basic protein-like 1 [Homo sapiens]          54   3e-08
gi|149999382 small inducible cytokine B10 precursor [Homo sapiens]     47   4e-06
gi|4505187 small inducible cytokine B9 precursor [Homo sapiens]        43   5e-05
gi|5453577 chemokine (C-X-C motif) ligand 13 (B-cell chemoattrac...    39   0.001
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]       34   0.022
gi|20149565 small inducible cytokine B14 precursor [Homo sapiens]      33   0.063
gi|169201839 PREDICTED: similar to hCG2038970 [Homo sapiens]           30   0.31 
gi|169201482 PREDICTED: similar to hCG2038970 [Homo sapiens]           30   0.31 
gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]       29   0.70 
gi|10834988 chemokine (C-X-C motif) ligand 12 (stromal cell-deri...    28   1.2  
gi|76563933 chemokine (C-X-C motif) ligand 12 (stromal cell-deri...    28   1.2  
gi|40316924 chemokine (C-X-C motif) ligand 12 (stromal cell-deri...    28   1.2  
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    27   2.7  
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap...    27   2.7  
gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo sap...    27   4.5  
gi|57528101 hypothetical protein LOC728130 [Homo sapiens]              27   4.5  
gi|150170710 hypothetical protein LOC728118 [Homo sapiens]             27   4.5  
gi|5174467 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3...    26   5.9  
gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]      26   7.7  
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom...    26   7.7  
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]                 26   7.7  

>gi|4505733 platelet factor 4 (chemokine (C-X-C motif) ligand 4)
           [Homo sapiens]
          Length = 101

 Score =  201 bits (511), Expect = 1e-52
 Identities = 101/101 (100%), Positives = 101/101 (100%)

Query: 1   MSSAAGFCASRPGLLFLGLLLLPLVVAFASAEAEEDGDLQCLCVKTTSQVRPRHITSLEV 60
           MSSAAGFCASRPGLLFLGLLLLPLVVAFASAEAEEDGDLQCLCVKTTSQVRPRHITSLEV
Sbjct: 1   MSSAAGFCASRPGLLFLGLLLLPLVVAFASAEAEEDGDLQCLCVKTTSQVRPRHITSLEV 60

Query: 61  IKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKIIKKLLES 101
           IKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKIIKKLLES
Sbjct: 61  IKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKIIKKLLES 101


>gi|4505735 platelet factor 4 variant 1 [Homo sapiens]
          Length = 104

 Score =  163 bits (413), Expect = 2e-41
 Identities = 83/93 (89%), Positives = 87/93 (93%)

Query: 9   ASRPGLLFLGLLLLPLVVAFASAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKAGPHCP 68
           A+R  +LFL LLLLP+VVAFA AEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKAGPHCP
Sbjct: 12  ATRQEMLFLALLLLPVVVAFARAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKAGPHCP 71

Query: 69  TAQLIATLKNGRKICLDLQAPLYKKIIKKLLES 101
           TAQLIATLKNGRKICLDLQA LYKKIIK+ LES
Sbjct: 72  TAQLIATLKNGRKICLDLQALLYKKIIKEHLES 104


>gi|4504153 chemokine (C-X-C motif) ligand 1 [Homo sapiens]
          Length = 107

 Score = 82.0 bits (201), Expect = 9e-17
 Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 1/100 (1%)

Query: 3   SAAGFCASRPGLLFLGLLLLPLVVAFA-SAEAEEDGDLQCLCVKTTSQVRPRHITSLEVI 61
           +A     S P LL + LLLL LV A   +A A    +L+C C++T   + P++I S+ V 
Sbjct: 4   AALSAAPSNPRLLRVALLLLLLVAAGRRAAGASVATELRCQCLQTLQGIHPKNIQSVNVK 63

Query: 62  KAGPHCPTAQLIATLKNGRKICLDLQAPLYKKIIKKLLES 101
             GPHC   ++IATLKNGRK CL+  +P+ KKII+K+L S
Sbjct: 64  SPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNS 103


>gi|4505981 pro-platelet basic protein precursor [Homo sapiens]
          Length = 128

 Score = 80.5 bits (197), Expect = 3e-16
 Identities = 37/70 (52%), Positives = 52/70 (74%)

Query: 30  SAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAP 89
           S +++   +L+C+C+KTTS + P++I SLEVI  G HC   ++IATLK+GRKICLD  AP
Sbjct: 52  SLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAP 111

Query: 90  LYKKIIKKLL 99
             KKI++K L
Sbjct: 112 RIKKIVQKKL 121


>gi|4506849 chemokine (C-X-C motif) ligand 5 precursor [Homo
           sapiens]
          Length = 114

 Score = 78.6 bits (192), Expect = 1e-15
 Identities = 37/87 (42%), Positives = 59/87 (67%)

Query: 14  LLFLGLLLLPLVVAFASAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKAGPHCPTAQLI 73
           L+ L LL  P  +A A   A    +L+C+C++TT  V P+ I++L+V   GP C   +++
Sbjct: 22  LVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVV 81

Query: 74  ATLKNGRKICLDLQAPLYKKIIKKLLE 100
           A+LKNG++ICLD +AP  KK+I+K+L+
Sbjct: 82  ASLKNGKEICLDPEAPFLKKVIQKILD 108


>gi|4504155 chemokine (C-X-C motif) ligand 2 [Homo sapiens]
          Length = 107

 Score = 75.5 bits (184), Expect = 9e-15
 Identities = 41/93 (44%), Positives = 62/93 (66%), Gaps = 1/93 (1%)

Query: 10  SRPGLLFLGLLLLPLVVAFA-SAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKAGPHCP 68
           S P LL + LLLL LV A   +A A    +L+C C++T   +  ++I S++V   GPHC 
Sbjct: 11  SNPRLLRVALLLLLLVAASRRAAGAPLATELRCQCLQTLQGIHLKNIQSVKVKSPGPHCA 70

Query: 69  TAQLIATLKNGRKICLDLQAPLYKKIIKKLLES 101
             ++IATLKNG+K CL+  +P+ KKII+K+L++
Sbjct: 71  QTEVIATLKNGQKACLNPASPMVKKIIEKMLKN 103


>gi|4506851 chemokine (C-X-C motif) ligand 6 (granulocyte
           chemotactic protein 2) [Homo sapiens]
          Length = 114

 Score = 74.7 bits (182), Expect = 1e-14
 Identities = 36/88 (40%), Positives = 57/88 (64%)

Query: 14  LLFLGLLLLPLVVAFASAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKAGPHCPTAQLI 73
           L  L LL  P  +A A   +    +L+C C++ T +V P+ I  L+V  AGP C   +++
Sbjct: 22  LALLLLLTPPGPLASAGPVSAVLTELRCTCLRVTLRVNPKTIGKLQVFPAGPQCSKVEVV 81

Query: 74  ATLKNGRKICLDLQAPLYKKIIKKLLES 101
           A+LKNG+++CLD +AP  KK+I+K+L+S
Sbjct: 82  ASLKNGKQVCLDPEAPFLKKVIQKILDS 109


>gi|54144650 chemokine (C-X-C motif) ligand 3 [Homo sapiens]
          Length = 107

 Score = 73.6 bits (179), Expect = 3e-14
 Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 1/91 (1%)

Query: 10  SRPGLLFLGLLLLPLVVAFA-SAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKAGPHCP 68
           S P LL + LLLL LV A   +A A    +L+C C++T   +  ++I S+ V   GPHC 
Sbjct: 11  SNPRLLRVALLLLLLVAASRRAAGASVVTELRCQCLQTLQGIHLKNIQSVNVRSPGPHCA 70

Query: 69  TAQLIATLKNGRKICLDLQAPLYKKIIKKLL 99
             ++IATLKNG+K CL+  +P+ +KII+K+L
Sbjct: 71  QTEVIATLKNGKKACLNPASPMVQKIIEKIL 101


>gi|10834978 interleukin 8 precursor [Homo sapiens]
          Length = 99

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 9/90 (10%)

Query: 20  LLLPLVVAFASAEAEEDG--------DLQCLCVKTTSQ-VRPRHITSLEVIKAGPHCPTA 70
           L + L+ AF  + A  +G        +L+C C+KT S+   P+ I  L VI++GPHC   
Sbjct: 5   LAVALLAAFLISAALCEGAVLPRSAKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANT 64

Query: 71  QLIATLKNGRKICLDLQAPLYKKIIKKLLE 100
           ++I  L +GR++CLD +    +++++K L+
Sbjct: 65  EIIVKLSDGRELCLDPKENWVQRVVEKFLK 94


>gi|221219042 pro-platelet basic protein-like 1 [Homo sapiens]
          Length = 126

 Score = 53.9 bits (128), Expect = 3e-08
 Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 2/65 (3%)

Query: 38  DLQCLCVKTTSQVRPRHIT-SLEV-IKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKII 95
           +L C+CVK+ S + P +I  ++ + + +G  C   Q+IA LK+GRK+ LD +AP  KKI+
Sbjct: 56  ELCCVCVKSASGIHPSNIIPNIHIYLLSGAPCNKVQVIAMLKDGRKMYLDPEAPRIKKIV 115

Query: 96  KKLLE 100
           +K+LE
Sbjct: 116 QKMLE 120


>gi|149999382 small inducible cytokine B10 precursor [Homo
          sapiens]
          Length = 98

 Score = 46.6 bits (109), Expect = 4e-06
 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 2/60 (3%)

Query: 39 LQCLCVKTTSQ-VRPRHITSLEVIKAGPHCPTAQLIATL-KNGRKICLDLQAPLYKKIIK 96
          ++C C+  ++Q V PR +  LE+I A   CP  ++IAT+ K G K CL+ ++   K ++K
Sbjct: 28 VRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAIKNLLK 87


>gi|4505187 small inducible cytokine B9 precursor [Homo sapiens]
          Length = 125

 Score = 43.1 bits (100), Expect = 5e-05
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 7/90 (7%)

Query: 11 RPGLLFLGLLLLPLVVAFASAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKA---GPHC 67
          + G+LFL  ++L +++          G  +C C+ T       H+ SL+ +K     P C
Sbjct: 3  KSGVLFLLGIILLVLIGVQGTPVVRKG--RCSCISTNQGTI--HLQSLKDLKQFAPSPSC 58

Query: 68 PTAQLIATLKNGRKICLDLQAPLYKKIIKK 97
             ++IATLKNG + CL+  +   K++IKK
Sbjct: 59 EKIEIIATLKNGVQTCLNPDSADVKELIKK 88


>gi|5453577 chemokine (C-X-C motif) ligand 13 (B-cell
          chemoattractant) [Homo sapiens]
          Length = 109

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 4/84 (4%)

Query: 19 LLLLPLVVAFASAEAEED---GDLQCLCVKTTSQVRPRH-ITSLEVIKAGPHCPTAQLIA 74
          LLL+ LV + +  +   +     L+C CV+ +S   PR  I  ++++  G  CP  ++I 
Sbjct: 8  LLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIV 67

Query: 75 TLKNGRKICLDLQAPLYKKIIKKL 98
            KN   +C+D QA   +++++ L
Sbjct: 68 WKKNKSIVCVDPQAEWIQRMMEVL 91


>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
          Length = 89

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 4/84 (4%)

Query: 17 LGLLLLPLVVAFASAEAEEDGDLQCLC--VKTTSQVRPRHITSLEVIKAGPHCPTAQLIA 74
          L   LL LV   A     + G  + LC  V T+ Q+  + I  ++  +  P CP   +I 
Sbjct: 4  LAAALLVLVCTMALCSCAQVGTNKELCCLVYTSWQIPQKFI--VDYSETSPQCPKPGVIL 61

Query: 75 TLKNGRKICLDLQAPLYKKIIKKL 98
            K GR+IC D      +K I  L
Sbjct: 62 LTKRGRQICADPNKKWVQKYISDL 85


>gi|20149565 small inducible cytokine B14 precursor [Homo sapiens]
          Length = 111

 Score = 32.7 bits (73), Expect = 0.063
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 10/88 (11%)

Query: 14 LLFLGLLLLPLVVAFASAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKAGPHCPTAQLI 73
          LL   LLLL L +  A  +  +     C C +   ++R   +  LE+    PHC    +I
Sbjct: 15 LLAAALLLLLLALYTARVDGSK-----CKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVI 69

Query: 74 ATLKN-----GRKICLDLQAPLYKKIIK 96
           T K+     G++ CL  +    K+ IK
Sbjct: 70 ITTKSVSRYRGQEHCLHPKLQSTKRFIK 97


>gi|169201839 PREDICTED: similar to hCG2038970 [Homo sapiens]
          Length = 915

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 4/61 (6%)

Query: 20  LLLPLVVAFASAEAEEDGDLQCLCVKTTSQV---RPRHITSLEVIKAGPHCPTAQLIATL 76
           L+  L   F +  AEE G ++C+ V T+S+V   +P    + E ++A P  P A+ +ATL
Sbjct: 512 LMWKLCRGFPNLGAEEFG-VRCMRVTTSSRVSFQQPSSGAAQEAMEACPLAPNAKTVATL 570

Query: 77  K 77
           +
Sbjct: 571 R 571


>gi|169201482 PREDICTED: similar to hCG2038970 [Homo sapiens]
          Length = 821

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 4/61 (6%)

Query: 20  LLLPLVVAFASAEAEEDGDLQCLCVKTTSQV---RPRHITSLEVIKAGPHCPTAQLIATL 76
           L+  L   F +  AEE G ++C+ V T+S+V   +P    + E ++A P  P A+ +ATL
Sbjct: 512 LMWKLCRGFPNLGAEEFG-VRCMRVTTSSRVSFQQPSSGAAQEAMEACPLAPNAKTVATL 570

Query: 77  K 77
           +
Sbjct: 571 R 571


>gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]
          Length = 98

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 19 LLLLPLVVAFASAEAEEDG--DLQCLCVKTTSQVRPRHITS---LEVIKAGPHCPTAQLI 73
          LL L L+V + S      G  D +  C+  T +  P +I       +IK G  C    ++
Sbjct: 4  LLALSLLVLWTSPAPTLSGTNDAEDCCLSVTQKPIPGYIVRNFHYLLIKDG--CRVPAVV 61

Query: 74 ATLKNGRKICLDLQAPLYKKIIKKL 98
           T   GR++C     P  ++II++L
Sbjct: 62 FTTLRGRQLCAPPDQPWVERIIQRL 86


>gi|10834988 chemokine (C-X-C motif) ligand 12 (stromal
          cell-derived factor 1) isoform beta [Homo sapiens]
          Length = 93

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 40 QCLCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNG-RKICLDLQAPLYKKIIKKL 98
          +C C    S V   ++  L+++   P+C   Q++A LKN  R++C+D +    ++ ++K 
Sbjct: 29 RCPCRFFESHVARANVKHLKILNT-PNC-ALQIVARLKNNNRQVCIDPKLKWIQEYLEKA 86

Query: 99 L 99
          L
Sbjct: 87 L 87


>gi|76563933 chemokine (C-X-C motif) ligand 12 (stromal
          cell-derived factor 1) isoform gamma [Homo sapiens]
          Length = 119

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 40 QCLCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNG-RKICLDLQAPLYKKIIKKL 98
          +C C    S V   ++  L+++   P+C   Q++A LKN  R++C+D +    ++ ++K 
Sbjct: 29 RCPCRFFESHVARANVKHLKILNT-PNC-ALQIVARLKNNNRQVCIDPKLKWIQEYLEKA 86

Query: 99 L 99
          L
Sbjct: 87 L 87


>gi|40316924 chemokine (C-X-C motif) ligand 12 (stromal
          cell-derived factor 1) isoform alpha [Homo sapiens]
          Length = 89

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 40 QCLCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNG-RKICLDLQAPLYKKIIKKL 98
          +C C    S V   ++  L+++   P+C   Q++A LKN  R++C+D +    ++ ++K 
Sbjct: 29 RCPCRFFESHVARANVKHLKILNT-PNC-ALQIVARLKNNNRQVCIDPKLKWIQEYLEKA 86

Query: 99 L 99
          L
Sbjct: 87 L 87


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sapiens]
          Length = 2462

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 5/60 (8%)

Query: 27   AFASAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDL 86
            AFA+   +  GD  C        V PR     EVIKA PH P     +    G  + L L
Sbjct: 1025 AFAAEAQKLPGDPPCWTSGLPFPVPPR-----EVIKASPHAPDPSAFSYAPPGHPLPLGL 1079


>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sapiens]
          Length = 2524

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 5/60 (8%)

Query: 27   AFASAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDL 86
            AFA+   +  GD  C        V PR     EVIKA PH P     +    G  + L L
Sbjct: 1041 AFAAEAQKLPGDPPCWTSGLPFPVPPR-----EVIKASPHAPDPSAFSYAPPGHPLPLGL 1095


>gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 878

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 17/71 (23%)

Query: 19  LLLLPLVVAFASAEAEEDGDLQ---------CLCVKTTSQVRPRHITSLEVI-------- 61
           ++   +   F   EAEE+  +Q         CL    T ++ PR   + EV+        
Sbjct: 396 MIFYEMAEKFLEFEAEEEMQIQKSQWMKGPQCLPPPATPRLEPRGPPAPEVVKQPVYLPS 455

Query: 62  KAGPHCPTAQL 72
           KAGP  PTA L
Sbjct: 456 KAGPKAPTACL 466


>gi|57528101 hypothetical protein LOC728130 [Homo sapiens]
          Length = 557

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 17/71 (23%)

Query: 19  LLLLPLVVAFASAEAEEDGDLQ---------CLCVKTTSQVRPRHITSLEVI-------- 61
           ++   +   F   EAEE+  +Q         CL    T ++ PR   + EV+        
Sbjct: 324 MIFYEMAEKFLEFEAEEEMQIQKSQWMKGPQCLPPPATPRLEPRGPPAPEVVKQPVYLPS 383

Query: 62  KAGPHCPTAQL 72
           KAGP  PTA L
Sbjct: 384 KAGPKAPTACL 394


>gi|150170710 hypothetical protein LOC728118 [Homo sapiens]
          Length = 878

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 17/71 (23%)

Query: 19  LLLLPLVVAFASAEAEEDGDLQ---------CLCVKTTSQVRPRHITSLEVI-------- 61
           ++   +   F   EAEE+  +Q         CL    T ++ PR   + EV+        
Sbjct: 396 MIFYEMAEKFLEFEAEEEMQIQKSQWMKGPQCLPPPATPRLEPRGPPAPEVVKQPVYLPS 455

Query: 62  KAGPHCPTAQL 72
           KAGP  PTA L
Sbjct: 456 KAGPKAPTACL 466


>gi|5174467 heparan sulfate D-glucosaminyl 3-O-sulfotransferase
          3B1 [Homo sapiens]
          Length = 390

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 11/16 (68%), Positives = 12/16 (75%)

Query: 3  SAAGFCASRPGLLFLG 18
          S AG CA+ PGLL LG
Sbjct: 50 SCAGSCAAAPGLLLLG 65


>gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]
          Length = 93

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 19 LLLLPLVVAFASAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIK----AGPHCPTAQLIA 74
          ++L+ L VA  + EA   G      V     VR R    L V+K        CP   ++ 
Sbjct: 10 VVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYR--LPLRVVKHFYWTSDSCPRPGVVL 67

Query: 75 TLKNGRKICLDLQAPLYKKIIKKL 98
               ++IC D + P  K I+ KL
Sbjct: 68 LTFRDKEICADPRVPWVKMILNKL 91


>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
          sapiens]
          Length = 93

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 30 SAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAP 89
          SA    D    C C   TS+  P++  + +  +    C    +I   K GR++C D    
Sbjct: 23 SAPLAADTPTAC-CFSYTSRQIPQNFIA-DYFETSSQCSKPSVIFLTKRGRQVCADPSEE 80

Query: 90 LYKKIIKKL 98
            +K +  L
Sbjct: 81 WVQKYVSDL 89


>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
          Length = 114

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 3/85 (3%)

Query: 14 LLFLGLLLLPLVVAFASAEAEEDGDLQCLCVKTTSQVRPRHITSLEVIKAGPHCPTAQLI 73
          LL L LL +  + A+       +   +  CV  T+Q  P        I  G       +I
Sbjct: 3  LLILALLGICSLTAYIVEGVGSEVSHRRTCVSLTTQRLPVSRIKTYTITEGS---LRAVI 59

Query: 74 ATLKNGRKICLDLQAPLYKKIIKKL 98
             K G K+C D QA   + +++ +
Sbjct: 60 FITKRGLKVCADPQATWVRDVVRSM 84


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.137    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,726,342
Number of Sequences: 37866
Number of extensions: 132846
Number of successful extensions: 352
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 334
Number of HSP's gapped (non-prelim): 31
length of query: 101
length of database: 18,247,518
effective HSP length: 72
effective length of query: 29
effective length of database: 15,521,166
effective search space: 450113814
effective search space used: 450113814
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.