Guide to the Human Genome
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Name: CXCL14 Sequence: fasta or formatted (111aa) NCBI GI: 20149565
Description:

small inducible cytokine B14 precursor

Referenced in:

Chemokines and Their Receptors
Kidney

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3          7           3
 C cysteine            3.6          4           1
 D aspartate           1.8          2           1
 E glutamate           6.3          7           2
 F phenylalanine       0.9          1           1
 G glycine             2.7          3           1
 H histidine           2.7          3           1
 I isoleucine          3.6          4           2
 K lysine             12.6         14           2
 L leucine            12.6         14           6
 M methionine          3.6          4           1
 N asparagine          1.8          2           1
 P proline             6.3          7           2
 Q glutamine           1.8          2           1
 R arginine            9.9         11           2
 S serine              7.2          8           1
 T threonine           3.6          4           2
 V valine              5.4          6           1
 W tryptophan          1.8          2           1
 Y tyrosine            5.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   small inducible cytokine B14 precursor 
CXCL2                 0.127   chemokine (C-X-C motif) ligand 2 
CXCL1                 0.107   chemokine (C-X-C motif) ligand 1 
CXCL3                 0.107   chemokine (C-X-C motif) ligand 3 
PF4V1                 0.044   platelet factor 4 variant 1 
CXCL6                 0.044   chemokine (C-X-C motif) ligand 6 (granulocyte chemota...
CCL26                 0.039   chemokine (C-C motif) ligand 26 precursor 
PF4                   0.039   platelet factor 4 (chemokine (C-X-C motif) ligand 4) ...
PPBP                  0.034   pro-platelet basic protein precursor 
FZD1                  0.024   frizzled 1 
NMUR2                 0.015   neuromedin U receptor 2 
GYLTL1B               0.010   glycosyltransferase-like 1B 
PTPN2                 0.010   protein tyrosine phosphatase, non-receptor type 2 iso...
PTPN2                 0.010   protein tyrosine phosphatase, non-receptor type 2 [H...
PTPN2                 0.010   protein tyrosine phosphatase, non-receptor type 2 is...
ADAM15                0.005   a disintegrin and metalloproteinase domain 15 isofor...
PALB2                 0.005   partner and localizer of BRCA2 
HMGXB3                0.005   HMG box domain containing 3 
PREX1                 0.005   phosphatidylinositol-3,4,5-trisphosphate-dependent R...
CCL24                 0.005   small inducible cytokine A24 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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