Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ANP32E Sequence: fasta or formatted (220aa) NCBI GI: 210147571
Description:

acidic (leucine-rich) nuclear phosphoprotein 32 family, member E isoform 3

Referenced in:

HLA and Related Proteins
Nucleus and Nucleolus

Other entries for this name:
alt prot [268aa] acidic (leucine-rich) nuclear phosphoprotein 32 family, member E ...
alt prot [227aa] acidic (leucine-rich) nuclear phosphoprotein 32 family, member E ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6          8           1
 C cysteine            0.9          2           1
 D aspartate          13.2         29           4
 E glutamate          28.2         62          10
 F phenylalanine       1.4          3           1
 G glycine             7.3         16           2
 H histidine           0.0          0           0
 I isoleucine          3.2          7           2
 K lysine              4.5         10           1
 L leucine            11.8         26           2
 M methionine          0.9          2           1
 N asparagine          5.5         12           1
 P proline             2.3          5           2
 Q glutamine           2.3          5           2
 R arginine            2.7          6           1
 S serine              5.5         12           2
 T threonine           1.8          4           1
 V valine              2.3          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acidic (leucine-rich) nuclear phosphoprotein 32 fam... 
ANP32E                1.000   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
ANP32E                0.745   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32A                0.520   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
ANP32B                0.518   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
LOC647020             0.436   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.436   PREDICTED: similar to acidic (leucine-rich) nuclear...
ANP32C                0.383   acidic nuclear phosphoprotein 32C 
LOC647020             0.275   PREDICTED: similar to hCG1791241 
ANP32D                0.227   acidic nuclear phosphoprotein 32D 
RPGR                  0.147   retinitis pigmentosa GTPase regulator isoform C [Hom...
CENPB                 0.123   centromere protein B 
RANGAP1               0.120   Ran GTPase activating protein 1 
PELP1                 0.118   proline, glutamic acid and leucine rich protein 1 [...
NCL                   0.118   nucleolin 
MYT1L                 0.113   myelin transcription factor 1-like 
SUPT6H                0.106   suppressor of Ty 6 homolog 
MYST4                 0.104   MYST histone acetyltransferase (monocytic leukemia)...
HRC                   0.101   histidine rich calcium binding protein precursor [Hom...
NSBP1                 0.101   nucleosomal binding protein 1 
UBTF                  0.101   upstream binding transcription factor, RNA polymera...
UBTF                  0.101   upstream binding transcription factor, RNA polymera...
UBTF                  0.101   upstream binding transcription factor, RNA polymerase...
WDR87                 0.099   NYD-SP11 protein 
SETD1B                0.099   SET domain containing 1B 
C12orf12              0.096   hypothetical protein LOC196477 
SUPT5H                0.096   suppressor of Ty 5 homolog isoform a 
SUPT5H                0.096   suppressor of Ty 5 homolog isoform a 
SUPT5H                0.096   suppressor of Ty 5 homolog isoform a 
MYT1                  0.096   myelin transcription factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press