Search of human proteins with 13027600

Search of human proteins with 13027600

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13027600 hypothetical protein LOC65990 [Homo sapiens]
         (235 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13027600 hypothetical protein LOC65990 [Homo sapiens]              473   e-134
gi|154240720 hypothetical protein LOC134145 [Homo sapiens]            154   5e-38
gi|55741675 hypothetical protein LOC22889 [Homo sapiens]               33   0.21 
gi|239753043 PREDICTED: hypothetical protein [Homo sapiens]            32   0.47 
gi|239758067 PREDICTED: similar to facioscapulohumeral muscular ...    31   0.81 
gi|153792393 G protein-coupled receptor 137C [Homo sapiens]            31   1.1  
gi|63055047 hairy and enhancer of split homolog 2 [Homo sapiens]       30   1.4  
gi|239755805 PREDICTED: hypothetical protein [Homo sapiens]            30   2.3  
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ...    29   3.1  
gi|104487297 protein tyrosine phosphatase, receptor type, sigma ...    29   4.0  
gi|104487006 protein tyrosine phosphatase, receptor type, sigma ...    29   4.0  
gi|22027609 alpha 1 type XIII collagen isoform 19 [Homo sapiens]       29   4.0  
gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens]       29   4.0  
gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens]       29   4.0  
gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens]        29   4.0  
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho...    29   4.0  
gi|4502907 chymase 1, mast cell preproprotein [Homo sapiens]           28   5.2  
gi|169216044 PREDICTED: similar to hCG2041320 [Homo sapiens]           28   5.2  
gi|169215838 PREDICTED: similar to hCG2041320 [Homo sapiens]           28   5.2  
gi|169215637 PREDICTED: similar to hCG2041320 [Homo sapiens]           28   5.2  
gi|40807363 epidermal retinal dehydrogenase 2 [Homo sapiens]           28   5.2  
gi|6754638 microtubule-associated protein tau isoform 2 [Homo sa...    28   6.8  
gi|8400715 microtubule-associated protein tau isoform 4 [Homo sa...    28   6.8  
gi|8400711 microtubule-associated protein tau isoform 3 [Homo sa...    28   6.8  
gi|82534351 microtubule-associated protein tau isoform 1 [Homo s...    28   6.8  
gi|178557736 microtubule-associated protein tau isoform 5 [Homo ...    28   6.8  
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]        28   6.8  
gi|116805334 Ras-induced senescence 1 [Homo sapiens]                   28   6.8  
gi|23397672 homeobox D4 [Homo sapiens]                                 28   8.9  
gi|20143482 melanoma antigen family E, 1 [Homo sapiens]                28   8.9  

>gi|13027600 hypothetical protein LOC65990 [Homo sapiens]
          Length = 235

 Score =  473 bits (1216), Expect = e-134
 Identities = 235/235 (100%), Positives = 235/235 (100%)

Query: 1   MEQDDPVEALTELRERRLGALELLQAAAGSGLAAYAVWALLLQPGFRRVPLRLQVPYVGA 60
           MEQDDPVEALTELRERRLGALELLQAAAGSGLAAYAVWALLLQPGFRRVPLRLQVPYVGA
Sbjct: 1   MEQDDPVEALTELRERRLGALELLQAAAGSGLAAYAVWALLLQPGFRRVPLRLQVPYVGA 60

Query: 61  SARQVEHVLSLLRGRPGKTVDLGSGDGRIVLAAHRCGLRPAVGYELNPWLVALARLHAWR 120
           SARQVEHVLSLLRGRPGKTVDLGSGDGRIVLAAHRCGLRPAVGYELNPWLVALARLHAWR
Sbjct: 61  SARQVEHVLSLLRGRPGKTVDLGSGDGRIVLAAHRCGLRPAVGYELNPWLVALARLHAWR 120

Query: 121 AGCAGSVCYRRKDLWKVSLRDCRNVSVFLAPSVLPLLEDKLRTELPAGARVVSGRFPLPT 180
           AGCAGSVCYRRKDLWKVSLRDCRNVSVFLAPSVLPLLEDKLRTELPAGARVVSGRFPLPT
Sbjct: 121 AGCAGSVCYRRKDLWKVSLRDCRNVSVFLAPSVLPLLEDKLRTELPAGARVVSGRFPLPT 180

Query: 181 WQPVTAVGEGLDRVWAYDVPEGGQAGEAASSRIPIQAAPGPSSAPIPGGLISQAS 235
           WQPVTAVGEGLDRVWAYDVPEGGQAGEAASSRIPIQAAPGPSSAPIPGGLISQAS
Sbjct: 181 WQPVTAVGEGLDRVWAYDVPEGGQAGEAASSRIPIQAAPGPSSAPIPGGLISQAS 235


>gi|154240720 hypothetical protein LOC134145 [Homo sapiens]
          Length = 233

 Score =  154 bits (390), Expect = 5e-38
 Identities = 89/193 (46%), Positives = 116/193 (60%), Gaps = 9/193 (4%)

Query: 29  GSGLAAYAVWALLLQPGFRRVPLRLQVPYVGASARQVEHVLSLLRGRPGKTVDLGSGDGR 88
           G+ +A YAV    + P  R+V L    P+V A+ +Q+E+V+ +LR R G  VD+GSGDGR
Sbjct: 46  GTLVAVYAVATPFVTPALRKVCL----PFVPATTKQIENVVKMLRCRRGSLVDIGSGDGR 101

Query: 89  IVLAAHRCGLRPAVGYELNPWLVALARLHAWRAGCAGSVCYRRKDLWKVSLRDCRNVSVF 148
           IV+AA + G   AVGYELNPWLV  +R  AWR G  GS  +   DLWKV+     NV +F
Sbjct: 102 IVIAAAKKGFT-AVGYELNPWLVWYSRYRAWREGVHGSAKFYISDLWKVTFSQYSNVVIF 160

Query: 149 LAPSVLPLLEDKLRTELPAGARVVSGRFPLPTWQPVTAVGEGLDRVWAYDVPE-GGQAGE 207
             P ++  LE KL  EL   ARV++ RFP P W P    GEG+D VWAYD     G+   
Sbjct: 161 GVPQMMLQLEKKLERELEDDARVIACRFPFPHWTPDHVTGEGIDTVWAYDASTFRGREKR 220

Query: 208 AASS---RIPIQA 217
             +S   ++PIQA
Sbjct: 221 PCTSMHFQLPIQA 233


>gi|55741675 hypothetical protein LOC22889 [Homo sapiens]
          Length = 614

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 17/82 (20%)

Query: 146 SVFLAPSVLPLLEDKLRTELPAGARVVSGRFPLPTWQPVTAVGEGLDRVWAYDVPEGGQA 205
           +V LAP VLP L        P G   V  ++P+   QP  + G+          P GG  
Sbjct: 387 AVSLAPGVLPAL--------PTGVPPVPTQYPITQVQPPASTGQS---------PMGGPF 429

Query: 206 GEAASSRIPIQAAPGPSSAPIP 227
             AA  +  + A P P   P P
Sbjct: 430 IPAAPVKTALPAGPQPQPQPQP 451


>gi|239753043 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 451

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 189 EGLDRVWAYDVPEGGQAGEAASSRIPIQAAPGPSSAPIPGGL 230
           EGL R  + ++P    +G      +  +AAPGP  AP P GL
Sbjct: 368 EGLRRFISQELPASSPSGGTNRPDLSNKAAPGPHPAPAPQGL 409


>gi|239758067 PREDICTED: similar to facioscapulohumeral muscular
           dystrophy [Homo sapiens]
          Length = 468

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 42/146 (28%), Positives = 57/146 (39%), Gaps = 18/146 (12%)

Query: 107 NPWLVALARLHAWRAGCAG-----SVCYRRKDLWKVSLRDCRNVSVFLAPSVLPLLEDKL 161
           +P  VA A + AW   C G     S   R   L + + R+  + +   +P    L +   
Sbjct: 268 DPSWVAFAHIGAWGTRCGGGKEFSSSRKRYSSLLRGASREAASSNASSSPGTPFLGKVVP 327

Query: 162 RTELPA--GARVVSGRFPLPTWQPVT-AVGEG---LDRVWAYDVPEGGQAGEAASSRIPI 215
             E P   GA   +GR  + T  P   A G     L    A   P G QAGE    R+ +
Sbjct: 328 AAETPGSPGAHPAAGRRAVQTSAPAPGATGRAPGCLASAPAMRRPLGAQAGEVELPRLLV 387

Query: 216 QAA------PGPS-SAPIPGGLISQA 234
                    PGPS +A  PG  + QA
Sbjct: 388 PTPPRRPGDPGPSPNADSPGKRVGQA 413


>gi|153792393 G protein-coupled receptor 137C [Homo sapiens]
          Length = 429

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 16/128 (12%)

Query: 51  LRLQVPYVGASARQVEHVLSLLRGRPGKTVDLGSGDGRIVLAAHRCGLRPAVGYELNPWL 110
           +R+ VP   A+A           GR   T   GSG G  V AA    +  +V        
Sbjct: 1   MRVSVPGPAAAAAPAA-------GREPSTPGGGSGGGGAVAAASGAAVPGSVQ------- 46

Query: 111 VALARLHAWRAGCAGSVCYRRKDLWKVSLRDCRNVSVFLAPSVLPLLEDKLRTELPAGAR 170
           +AL+ LHA       +  Y +  LW++ L   R +S       L LL   LRT L + A 
Sbjct: 47  LALSVLHALLYAALFAFAYLQ--LWRLLLYRERRLSYQSLCLFLCLLWAALRTTLFSAAF 104

Query: 171 VVSGRFPL 178
            +SG  PL
Sbjct: 105 SLSGSLPL 112


>gi|63055047 hairy and enhancer of split homolog 2 [Homo sapiens]
          Length = 173

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 131 RKDLWKVSLRDCRNVSVFLAPSVLPLLEDKLRTELPAGARVVSGRFPLPTWQPVTAVGEG 190
           + D+ ++++R  + +     P+  PL  D  R    A    ++   P             
Sbjct: 56  KADVLEMTVRFLQELPASSWPTAAPLPCDSYREGYSACVARLARVLPACRVLEPAVSARL 115

Query: 191 LDRVW---AYDVPEGGQAGEAASSRIPIQA---APGPSSAPIP 227
           L+ +W   A    +GG+AG+++    P  A   AP P+SAP+P
Sbjct: 116 LEHLWRRAASATLDGGRAGDSSGPSAPAPAPASAPEPASAPVP 158


>gi|239755805 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 435

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 15/64 (23%)

Query: 162 RTELPAGARVVSGRFPLPTWQPVTAVGEGLDRVWAYDVPEGGQAGEAASSRIPIQAAPGP 221
           RTE+  G R  +GR P P W     VG+          P  G      SSRI      GP
Sbjct: 285 RTEVSTGRREQAGRLPRPRWVRGRQVGK---------TPARG------SSRIVAVPFLGP 329

Query: 222 SSAP 225
           SS+P
Sbjct: 330 SSSP 333


>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
            sapiens]
          Length = 1336

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 29/98 (29%), Positives = 35/98 (35%), Gaps = 27/98 (27%)

Query: 151  PSVLPLLEDKLRTELPAGARVVSGRFPLPTWQPVTAVGEGLDRV------------WAYD 198
            PS   ++ DK   E PAGA       P P     TAVG  L R+            W   
Sbjct: 1005 PSYFAIVRDKEPAEPPAGAFPGFPSPPAPPAAAATAVGPPLCRLAFEDESPPAPARWPRS 1064

Query: 199  VPE---------------GGQAGEAASSRIPIQAAPGP 221
             PE               GG  G A ++  P +AAP P
Sbjct: 1065 DPESQPLLGPGAGGAGGTGGAGGGAPAAPPPCRAAPPP 1102


>gi|104487297 protein tyrosine phosphatase, receptor type, sigma
           isoform 2 precursor [Homo sapiens]
          Length = 1910

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 3/84 (3%)

Query: 150 APSVLPLLEDKLRTE---LPAGARVVSGRFPLPTWQPVTAVGEGLDRVWAYDVPEGGQAG 206
           A  VL + ED  R     L A     +G   L    PV A   G    +   V E G  G
Sbjct: 895 AAEVLSIPEDTPRGHPQILEAAGNASAGTVLLRWLPPVPAERNGAIVKYTVAVREAGALG 954

Query: 207 EAASSRIPIQAAPGPSSAPIPGGL 230
            A  + +P  A PG  +A    GL
Sbjct: 955 PARETELPAAAEPGAENALTLQGL 978


>gi|104487006 protein tyrosine phosphatase, receptor type, sigma
            isoform 1 precursor [Homo sapiens]
          Length = 1948

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 3/84 (3%)

Query: 150  APSVLPLLEDKLRTE---LPAGARVVSGRFPLPTWQPVTAVGEGLDRVWAYDVPEGGQAG 206
            A  VL + ED  R     L A     +G   L    PV A   G    +   V E G  G
Sbjct: 917  AAEVLSIPEDTPRGHPQILEAAGNASAGTVLLRWLPPVPAERNGAIVKYTVAVREAGALG 976

Query: 207  EAASSRIPIQAAPGPSSAPIPGGL 230
             A  + +P  A PG  +A    GL
Sbjct: 977  PARETELPAAAEPGAENALTLQGL 1000


>gi|22027609 alpha 1 type XIII collagen isoform 19 [Homo sapiens]
          Length = 610

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 201 EGGQAGEAASSRIPIQAAPGPSSAPIPGGL 230
           E G+ GE   +  P+   PGP   P P GL
Sbjct: 486 EKGEKGETGQAGSPVPGLPGPEGPPGPPGL 515


>gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens]
          Length = 668

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 201 EGGQAGEAASSRIPIQAAPGPSSAPIPGGL 230
           E G+ GE   +  P+   PGP   P P GL
Sbjct: 515 EKGEKGETGQAGSPVPGLPGPEGPPGPPGL 544


>gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens]
          Length = 690

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 201 EGGQAGEAASSRIPIQAAPGPSSAPIPGGL 230
           E G+ GE   +  P+   PGP   P P GL
Sbjct: 537 EKGEKGETGQAGSPVPGLPGPEGPPGPPGL 566


>gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens]
          Length = 702

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 201 EGGQAGEAASSRIPIQAAPGPSSAPIPGGL 230
           E G+ GE   +  P+   PGP   P P GL
Sbjct: 537 EKGEKGETGQAGSPVPGLPGPEGPPGPPGL 566


>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
           sapiens]
          Length = 406

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 21/84 (25%), Positives = 29/84 (34%), Gaps = 8/84 (9%)

Query: 151 PSVLPLLEDKLRTELPAGARVVS-----GRFPLPTWQPVTAVGEGLDRVWAYDVPEGGQA 205
           P + P+        +P G R+          P+P W P+  V  G        VP G   
Sbjct: 271 PPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMA---PVPPGPPM 327

Query: 206 GEAASSRIPIQAAPGPSSAPIPGG 229
                     +  PGP  AP+P G
Sbjct: 328 ARVPPGPPMARVPPGPPMAPLPPG 351


>gi|4502907 chymase 1, mast cell preproprotein [Homo sapiens]
          Length = 247

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 41  LLQPG---FRRVPLRLQVPYVGASARQVEHVLSLLRGRPGKTVDLGSGD 86
           +L+PG    + V LRL  P   +  R  +H L L  G P KT     GD
Sbjct: 154 VLKPGSDTLQEVKLRLMDPQACSHFRDFDHNLQLCVGNPRKTKSAFKGD 202


>gi|169216044 PREDICTED: similar to hCG2041320 [Homo sapiens]
          Length = 318

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 205 AGEAASSRIPIQAAPGPSSAPIPG 228
           AG   S+ +PI  APG  + P+PG
Sbjct: 255 AGRGVSAGVPIPQAPGGLAGPVPG 278


>gi|169215838 PREDICTED: similar to hCG2041320 [Homo sapiens]
          Length = 318

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 205 AGEAASSRIPIQAAPGPSSAPIPG 228
           AG   S+ +PI  APG  + P+PG
Sbjct: 255 AGRGVSAGVPIPQAPGGLAGPVPG 278


>gi|169215637 PREDICTED: similar to hCG2041320 [Homo sapiens]
          Length = 318

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 205 AGEAASSRIPIQAAPGPSSAPIPG 228
           AG   S+ +PI  APG  + P+PG
Sbjct: 255 AGRGVSAGVPIPQAPGGLAGPVPG 278


>gi|40807363 epidermal retinal dehydrogenase 2 [Homo sapiens]
          Length = 309

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)

Query: 138 SLRDCRNVSVFLAPSVLPLLEDKLRTELPAGARVVSGRFPLPTWQPVTAVGEGLDRVWA 196
           +L+  + + +FL  S+  LLE  +   LP   + V+G   L     +T  G GL R+ A
Sbjct: 4   NLQSSKKLFIFLGKSLFSLLEAMIFALLPKPRKNVAGEIVL-----ITGAGSGLGRLLA 57


>gi|6754638 microtubule-associated protein tau isoform 2 [Homo
           sapiens]
          Length = 441

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 203 GQAGEAASSRIPIQAAPGPSSAPIPG 228
           GQ G+A ++RIP +  P P + P  G
Sbjct: 161 GQKGQANATRIPAKTPPAPKTPPSSG 186


>gi|8400715 microtubule-associated protein tau isoform 4 [Homo
           sapiens]
          Length = 352

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 203 GQAGEAASSRIPIQAAPGPSSAPIPG 228
           GQ G+A ++RIP +  P P + P  G
Sbjct: 103 GQKGQANATRIPAKTPPAPKTPPSSG 128


>gi|8400711 microtubule-associated protein tau isoform 3 [Homo
           sapiens]
          Length = 383

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 203 GQAGEAASSRIPIQAAPGPSSAPIPG 228
           GQ G+A ++RIP +  P P + P  G
Sbjct: 103 GQKGQANATRIPAKTPPAPKTPPSSG 128


>gi|82534351 microtubule-associated protein tau isoform 1 [Homo
           sapiens]
          Length = 758

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 203 GQAGEAASSRIPIQAAPGPSSAPIPG 228
           GQ G+A ++RIP +  P P + P  G
Sbjct: 478 GQKGQANATRIPAKTPPAPKTPPSSG 503


>gi|178557736 microtubule-associated protein tau isoform 5 [Homo
           sapiens]
          Length = 412

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 203 GQAGEAASSRIPIQAAPGPSSAPIPG 228
           GQ G+A ++RIP +  P P + P  G
Sbjct: 132 GQKGQANATRIPAKTPPAPKTPPSSG 157


>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
          Length = 2089

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 7/37 (18%)

Query: 200 PEGG---QAGEAASSR----IPIQAAPGPSSAPIPGG 229
           PEGG   Q G+A+S      +     PGP+SAP+P G
Sbjct: 951 PEGGSQDQKGQASSPTPEPGVGAGDLPGPTSAPVPSG 987


>gi|116805334 Ras-induced senescence 1 [Homo sapiens]
          Length = 300

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 20/63 (31%), Positives = 27/63 (42%)

Query: 165 LPAGARVVSGRFPLPTWQPVTAVGEGLDRVWAYDVPEGGQAGEAASSRIPIQAAPGPSSA 224
           LP  A +++   PLP  +   A   GL  V +        A E  + R+   AAPGP   
Sbjct: 2   LPLLAALLAAACPLPPVRGGAADAPGLLGVPSNASVNASSADEPIAPRLLASAAPGPPER 61

Query: 225 PIP 227
           P P
Sbjct: 62  PGP 64


>gi|23397672 homeobox D4 [Homo sapiens]
          Length = 255

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 12/27 (44%), Positives = 14/27 (51%)

Query: 202 GGQAGEAASSRIPIQAAPGPSSAPIPG 228
           GG  G  A+   P  A P P  AP+PG
Sbjct: 83  GGPGGHYAAPGEPCPAPPAPPPAPLPG 109


>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
          Length = 957

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 20/89 (22%)

Query: 149 LAPSVLPLLEDKLRTELPAGARVVSGRFPLPTWQPVTAV----GEGLDRVWAYDVPEGGQ 204
           L+ SV P   ++L T +P          P P   P T+V    GEGL         +G  
Sbjct: 328 LSTSVPPTATEELSTSVP----------PTPGEGPSTSVLPIPGEGLSTSVPPTASDGSD 377

Query: 205 A------GEAASSRIPIQAAPGPSSAPIP 227
                  GE AS+ +   A  GP S+ +P
Sbjct: 378 TSVPPTPGEGASTLVQPTAPDGPGSSVLP 406


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,940,195
Number of Sequences: 37866
Number of extensions: 488080
Number of successful extensions: 1733
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1700
Number of HSP's gapped (non-prelim): 48
length of query: 235
length of database: 18,247,518
effective HSP length: 99
effective length of query: 136
effective length of database: 14,498,784
effective search space: 1971834624
effective search space used: 1971834624
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.