Guide to the Human Genome
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Name: FAM173B Sequence: fasta or formatted (233aa) NCBI GI: 154240720
Description:

hypothetical protein LOC134145

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         17           3
 C cysteine            1.7          4           1
 D aspartate           3.4          8           2
 E glutamate           6.0         14           2
 F phenylalanine       5.2         12           1
 G glycine             8.6         20           4
 H histidine           2.1          5           1
 I isoleucine          4.3         10           1
 K lysine              5.2         12           2
 L leucine             8.6         20           2
 M methionine          2.1          5           2
 N asparagine          2.1          5           1
 P proline             5.6         13           1
 Q glutamine           3.4          8           1
 R arginine            6.4         15           2
 S serine              6.0         14           1
 T threonine           6.0         14           2
 V valine              9.9         23           2
 W tryptophan          3.0          7           1
 Y tyrosine            3.0          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC134145 
FAM173A               0.283   hypothetical protein LOC65990 
SLC22A18              0.011   tumor suppressing subtransferable candidate 5 [Homo...
SLC22A18              0.011   tumor suppressing subtransferable candidate 5 [Homo...
B9D1                  0.011   B9 protein 
HSD17B2               0.007   hydroxysteroid (17-beta) dehydrogenase 2 
ANXA9                 0.007   annexin A9 
ESRRA                 0.007   estrogen-related receptor alpha 
BTBD17                0.007   BTB (POZ) domain containing 17 
METTL10               0.007   methyltransferase like 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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