Guide to the Human Genome
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Name: KIAA0907 Sequence: fasta or formatted (614aa) NCBI GI: 55741675
Description:

hypothetical protein LOC22889

Referenced in:

Small RNAs in RNA Processing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         60           4
 C cysteine            0.7          4           1
 D aspartate           2.4         15           2
 E glutamate           5.5         34           4
 F phenylalanine       2.6         16           1
 G glycine             9.9         61           2
 H histidine           2.1         13           1
 I isoleucine          3.3         20           2
 K lysine              5.4         33           2
 L leucine             6.4         39           2
 M methionine          2.0         12           1
 N asparagine          2.8         17           1
 P proline            12.9         79           3
 Q glutamine           6.7         41           2
 R arginine            3.6         22           2
 S serine              8.0         49           3
 T threonine           6.2         38           2
 V valine              6.4         39           2
 W tryptophan          0.5          3           1
 Y tyrosine            3.1         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC22889 
SF3A2                 0.033   splicing factor 3a, subunit 2 
ZNF207                0.032   zinc finger protein 207 isoform a 
GRINA                 0.028   glutamate receptor, ionotropic, N-methyl D-aspartate...
GRINA                 0.028   glutamate receptor, ionotropic, N-methyl D-aspartate...
WASF2                 0.028   WAS protein family, member 2 
DDX46                 0.027   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
NACA                  0.026   nascent polypeptide-associated complex alpha subuni...
SAMD1                 0.026   sterile alpha motif domain containing 1 
ESX1                  0.026   extraembryonic, spermatogenesis, homeobox 1-like [Ho...
ZNF207                0.026   zinc finger protein 207 isoform c 
ZNF207                0.026   zinc finger protein 207 isoform b 
CPSF6                 0.025   cleavage and polyadenylation specific factor 6, 68 ...
C6orf132              0.025   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.025   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.025   PREDICTED: hypothetical protein LOC647024 
SF3A1                 0.025   splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom...
SF3A1                 0.025   splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo...
YLPM1                 0.025   YLP motif containing 1 
WASL                  0.024   Wiskott-Aldrich syndrome gene-like protein 
CREBBP                0.024   CREB binding protein isoform b 
CREBBP                0.024   CREB binding protein isoform a 
FLJ22184              0.024   PREDICTED: hypothetical protein FLJ22184 
LOC100134663          0.024   PREDICTED: hypothetical protein, partial 
TTN                   0.024   titin isoform N2-A 
FLJ22184              0.024   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.024   PREDICTED: hypothetical protein LOC80164 
VPS37C                0.024   vacuolar protein sorting 37C 
WASF1                 0.024   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.024   Wiskott-Aldrich syndrome protein family member 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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